Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    ------>NtERF2                  <------NtERF2 --------->ANAC55(2)                  --------->LBD16                 --------->RAP2.6(2)                 --------->DEAR3(1)                --------->ATERF1(1)                <---------LBD16 --------->ANAC58                <------NtERF2   ----------->GT1                --------->RAP2.3(1)               <---------ORA47(2)               <---------RAP2.3(1)               <---------ATERF1(1)              <---------DEAR3(1)<---------ANAC55(2)    <----------DOF2             --------->ANAC58                   <-----------GT1 <---------ARR11(3)       --------->DAG2    >>>>>>>>>>WRKY63  <---------AHL20(2) --------->ARR11(3)      ---------->DOF2    <-----------GT1   --------->AHL20(2) ------>DOF2<-----------HVH21 --------->MYB52(1)      --------->ZAT6                ----------->GT1   aaagagcttttgaaggtcgccgcataaaaaagtaacgtaacttatttgactatataactctaaattaaaaaaccctattttctatgaagtcaaaaaaaaa  5766300                                                                                                  ---                                                                                                  <--                                                                                               ------                                                            <---------ATHB12                 <-------                                             --------->GLK1(1)                             --------->ARR11(3)                                             --------->CCA1(2)                      <---------ANAC55(2)                                             <---------GLK1(1)                      --------->ANAC58                                            --------->ARR14(2)                      ----------->GT1                          --------->ZAT2    <---------ARR14(2)                 ---------->DOF2 ------           --------->REM1(1)                <---------ARR11(3)    <-----------RAV1(1)  ---------->DOF2           --------->ANAC46         ----------->TGA1<---------KAN4(1)     <------ZmHOX2a(1)<---------ARR11(3)      <-----------GT1     <---------ZAT2    --------->ARR11(3)    <---------MYB46(3)--------->ANAC58   aaacctattttctacatcatcgaaaccttgctgagacaatgacgaagatatccaatattccaatggatttgttggaggagataaagacgtaaagacctaa  5766400                                                                                              <------ ------->DOF2                   --------->TOE2(3)                                             ------- -------ICU4                 <-----------GT1                                                  <------ >MYB46(1)            --------->AHL20(2)                                 ------------>CBF     ------- --MYB59           <---------HSFB2a(2)           <---------TOE1(1)      ------>ZmHOX2a(1)    <------- >MYB83            --------->HSFB2a(2)       <---------ZAT6      ---------->DOF2   ----------->GT1   taaagacttgttttttgggttctataaaatataacctttgttatttagtgttcgaggtaaacaagactaaagtccttcaatgctcatgtaaaatagaatc  5766500         -------->ATHB1         --------->ATHB12         --------->ATHB51                           <---------ICU4                        <----------DOF2         <---------ICU4          --------->ZAT14   --------->ICU4                <------------CBF        <---------YAB1           <---------ZAT14<-----------GT1                 --------->ATHB12        --------->ICU4       --------->ZAT6     <---------YAB1                  <---------ICU4 ---ARR14(2)            <---------ICU4        --------->YAB1                    --------->ATHB51 -->ARR14(2)       ------>ZmHOX2a(1)      <---------AHL20(2)                    -------->ATHB1 -----ARR10       --------->TOE2(3)   <---------MYB46(3)                       <---------YAB1 -->GLK1(2)       --------->TOE1(3)   ----------->GT1                          --------->ICU4  <----- --GLK1(2)<------------CBF <-----------GT1--------->AHL20(2)        ----------->GT1   <-----------GT1   tggccaaagaattattgtttccttaatttttacactatagtggtttaattatactaattagcccattagggagtaaaaagaattattgtttccttttctt  5766600                                             >>>>>>>>>MYB98                                            ------>MYB46(1)                                            ------>MYB83                                          <---------MYB111(1)             <----------DOF2              <---------MYB46(2)    --------->LBD16                       <---------MYB59   --------->ANAC58                      <---------ANAC55(2)                   <---------ANAC58   --------->ANAC58                      --------->ANAC55(2)                   <---------ANAC58   --------->ANAC46             --------->DAG2       <---------ANAC58      ---------->DOF2   --------->ANAC55(1)         ---------->DOF2       <---------ANAC58     <------ZmHOX2a(1)  --------  <---------LBD16 ---------->DOF2      <-----------GT1                  --------->MYB59      -------- -----DOF2<-----------GT1   <-----------TBP --------->MYB52(1)--------->AHL20(2)     ----------->GT1   ttttcacggaaataacttttgaaagttggcatataaagttgttacctaacttatttcttgtcgattaaaaagattaggaaagcgtgagagtaaaacccta  5766700                                                                                            ---------                                                                             --------->ARR14(2)                                                                             <---------ARR11(3)                                            --------->ARR11(3)               --------->ARR11(3)                                     --------->YAB1                        ----------->ARR10---------                       <---------ANAC58     <---------ARR11(3)            <------ZmHOX2a(1) <--------                       <---------ANAC58 ---------->DOF2           <-----------RAV1(1)<---------HSFC1(1)         <------------CBF --------->At4g35610                     <---------MYB46(3) --------->HSFB2a(2) ->TOE2(3)       <---------YAB1 ------------>CBF              --------->ATHB12       <---------HSFB2a(2) ->TOE1(3)  --------->YAB1<---------At4g35610                <---------ATHB12<---------ARR14(2)  ----   aatttctattacattgatcatccttgagtgctgaaacaatgacaaagatgtccaaacttccgaatgatttgttggaggagatactctctagaagtccact  5766800                                  --------->ALFIN1                               --------->DAG2                            <---------------AGL15                                                 ---                           ----------------->AGL1                                                 ---                         --------->AtLEC2                              --------->ANAC58       ------>NtERF2 >ZAT14                <---------ANAC58                                --------->ANAC46    <---------At4g35610 >ZAT18                <---------ANAC58   <----------DOF2    <----------DOF2               --------->At4g35610 -ZAT14            <---------WOX13(1)  <---------ALFIN1 ---------->DOF2--------->ANAC58    --------->ZAT2 ----->ZAT14    <---------YAB1---------->DOF2    ---------->DOF2  ---------->DOF2       ---------->DOF2   gtattctatgagagcaatacgattgacttgcaaaaagtggaacactttagccaaagaagaaagctttacaaagaagcaactcgttcaaacaaaagctgcc  5766900                         <---------GLK1(2)                   --------->ICU4                   <---------YAB1                 --------->YAB1                 <---------ICU4                <---------YAB1                                                         --------->DAG2                --------->ICU4                               --------->ANAC58         ---------->DOF2             --------->ICU4                           --------->TOE2(3)            <---------------AGL15            --------->ARR11(3)                     --------->WOX13(1)       <-----------GT1    <---------AHL20(2)<---------WOX13(1)        --------->TOE2(3)         --------->WRKY12      ----- ------>ANAC58--------->YAB1                  ------->TEIL   --------->ANAC58      ================== ------>ANAC58<---------ICU4            <---------AHL20(2)   --------->ANAC46 --------->MYB46(3)-----   aaggaatttatggtgatcatgatgatggattctaagttttgtttaatgaacatcaatctcaacaaggaagaagacgttgaaccatctataaagtgtaatg  5767000                                                <---------AtMYB61                                                --------->MYB46(2)                                                --------->MYB59                                              <---------ANAC46                                            <---------MYB46(3)         <-----------------AG           <---------ANAC58         <-----------------AGL1    --------->YAB1        <-----------GT1            --------->ATHB12    -------->ATHB1                 -------->ATHB1<------MYB83    <---------ICU4                 <---------ICU4<------MYB46(1)   --------->ICU4                 <---------ATHB12   <---------AHL20(2)             <---------YAB1--------->MYB111(1)   <---------YAB1         <---------ANAC58  --------->MYB55(2)                                      -   --------->AHL20(2)     <---------ANAC58 --------->ALFIN1                                        <-   --------->AHL20(1)   <-----------HVH21  <---------AtMYB61                                       -- ---->YAB1        <---------MYB52(1)    <---------ANAC58                    --------->ZAT6      <---- ==========================MADS_MADS    <---------ANAC46        --------->DAG2                  ----- ------>GT1    <---------ATHB12 --------->WOX13(1)             ---------->DOF2            <---------ANAC46   gtaaaattattaacccaatcggtatgtgtcgagtctatcattgcggtggtttggtatgcatcacaaaaagcttcagtaacactagagatgtggtttggaa  5767100                                                                                         --------->At4g35610                                                                                         <---------ZAT2                                                                                         --------->ZAT2                                                                                <---------ANAC58                                          --------->ANAC58                      <---------ANAC58                                          --------->ANAC58             --------->ANAC58  <---------At4g35610  <---------ARR14(2)              --------->ANAC46                     ----------->GT1<---------At4g35610  --------->ARR14(2)              --------->ANAC58                --------->ANAC55(2) ------>NtERF2 -------->LBD16                   --------->ANAC58<---------AHL20(2)   --------->ANAC58<------NtERF2 --------ANAC55(2)              ---------->DOF2 --------->AHL20(2)<---------ANAC55(2) --------->LBD16 ------->ANAC55(2)           --------->TOE1(2)<---------CCA1(2) --------->CCA1(2)    --------->DEAR3(1) -----ARR14(2)         <------ZmHOX2a(2)  <---------ANAC55(2)  <---------ARR14(2)   --------->RAP2.3(1) ---->ARR14(2)      <---------MYB46(3)<-----------HVH21        --------->ARR14(2)  --------->SPL7   tccgtatttggggcaaactcggtggatcaaacctagaagccatcacgcatatatatatgctattggatacgagacgaaaaaatcgtgccgcagctacaaa  5767200  Previous    Next  AGI:  At3g16880.1    Description:  F-box protein-related. Identical to Putative F-box/Kelch-repeat protein At3g16880 [Arabidopsis Thaliana] (GB:Q9LIB4); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G16740.1); similar to F-box domain-containing protein [Solanum tuberosum] (GB:ABO92989.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 5766739    to: 5767836    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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