Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            ------>ZmHOX2a(1)         --------->ANAC46                                <---------ANAC58         --------->ANAC58                                <---------ANAC58         --------->ANAC58                               --------------->AtSPL8      ------>ZmHOX2a(2)                      --------->YAB1     <------ZmHOX2a(2)           <----------DOF2      <-----------GT1    <---------ARR14(2)           <---------DAG2  <---------AHL20(2)    --------->ARR14(2)     <---------TCP15(1)--------->AHL20(2)                  <---------YAB1 ------->ZAT2              <---------TCP20   <---------AHL20(2)                 <---------TOE2(3) --------ZAT2<---------ATHB12 <---------ALFIN1   --------->AHL20(2)            --------->YAB1 ------->At4g35610         --------->PCF2   <---------ATHB12-------->P       <---------WOX13(1) --------At4g35610    <----------DOF2   ----------------->AGL3             --------->ATHB12         - >AtLEC2--------->LBD16    --------->PCF5--------------->AGL15          <----------DOF2 -------->P  <   gagctggatccacgaatcaagggtctttggtcccactttcttcccaattatataaatttccttaccctatatttctttcattgatgattcaacccctata  5755500                                       ----------->RAV1(1)                                    --------->ANAC58                                    --------->ANAC46                                  ---------->DOF2                              <---------At4g35610                              --------->At4g35610                        --------->GLK1(2) -------->ZAT6         <---------GLK1(2)                               --------->AHL20(2)         --- -----------GT1      --------->LBD16--------->ANAC58           ----------->GT1            <----------   tttcactacttcacaaaataacccagaatttgagctcaaagcaacatccaaaatgttcttctaaatagaaaaataaaacagaatatagaacaatagtaca  5755600                                                              <---------AHL20(2)                                                  ------>ZmHOX2a(2)                                                <---------AGP1--------->AHL20(2)                                                <---------ARR11(3)                                                --------->ARR11(3)                                                <---------ARR14(2)           <---------MYB52(2)        ---------->DOF2         --------->AHL20(1)                  <---      --------->ANAC46            --------->AHL20(2)         <---------AHL20(2)                  ---- ------>AHL20(2)             <---------TOE2(3)  --------->ARR14(2)                             ------ -----AtSPL8           --------->ARR11(3)    --------->ALFIN1--------->AHL20(2)               -------   tataatatacaaaactaacttgtaagaaattgagaataaaaaagagagtggatctaaatgaaatttaataaaaccaatagtctaaatgtagagagaatga  5755700                 <---------ZAT2             <---------AHL20(1)                 <---------At4g35610        --------->AHL20(1)    --------->MYB52(1)                     --------->AHL20(2)    ---------->DOF2                      --------->AHL20(2) ------YAB1      --------->At4g35610 --------->AHL20(2) ------->GT1 <-----------HVH21      --------->AHL20(2)                    <---------AHL20(2) --->YAB1   --------->bZIP60(2) --------->AHL20(2)               <-----------GT1 -->ICU4<------ZmHOX2a(1)     ----------->GT1                <---------AHL20(2)          ------->TEIL   tgaaaataaaggacatgtcagcttctacatatatgtaaataaaaaatatatatgactgagtatataaaaaccacattttttttttcttctgcatctaaat  5755800                  --------->ICU4               <------ZmHOX2a(1)                                                    --------->ANAC58              <----------ID1                             ----------->GT1            --------->ANAC58              ----------->GT1                         --------->MYB52(1)  <---------TOE1(3)             ----------->GT1                     --------->AHL20(2)       <---------TOE2(3)         -        --------->AHL20(2)                  --------->AHL20(2) ---------->DOF2 <----------ARF1      <     --------->DAG2            <----------DOF2  --------->AHL20(2)    <----------DOF2      ----------   gttacaaaaattgaataggaaaaattaagagagctttactctgtgaataaataaaaaaacagagaaaaagagctctaaggtgagacaagccttgtcttct  5755900                                                                                              -------                                                                                       --------->ARR14(2)                                                                                    <---------ANAC58                                                                                    <---------ANAC58                  <-----------GT1                                                   --------->ANAC55(2)  ------->GAMYB--------->At4g35610                                                  <---------ANAC55(2) -------->At4g35610                                           <-------TEIL          <---------ANAC46 ---------At4g35610           *TSS           <---------MYB46(3)      <---------CCA1(2) <---------ARR14(2) >ID1          <---------At4g35610   <----------DOF2<---------HSFB2a(2)     ----------->RAV1(1)  ----   tcaactccctaagtctcatctcaccatctctctcttcttcttttttttggttacccagaagagattcacttctatctccaacaatttcgtattctctcat  5756000                                                                                           <---------ANAC58                                                                       <---------DAG2     <---------TOE1(2)                                                                       <----------DOF2 <---------ANAC58       --------->YAB1                                                <------------------------ANAC81   <---------AHL20(2)                         <----------DOF2  <----------DOF2         <---------ANAC58 -->YAB1 --------->AHL20(2)               <----------DOF2--------->ARR11(3)            <---------ANAC46 ----->YAB1                        <-----------GT1       <---------ARR11(3) <----------DOF2<---------ANAC58   aatattcaattttaaatcgaataaaactcgcgtcaatttcccctctttctttctgggtatatattcttttctgcttttctttttttgtttcttgggttcg  5756100                                                                <---------ZAT2                                                                --------->At4g35610                                                                --------->ZAT2                                                                <---------At4g35610                                                           <---------PCF2                                                           --------->TCP20                                                          <------MYB46(1)                                                          <------MYB83                                                         --------->MYB55(2)                                                        --------->ALFIN1                                                        <--------P                                                       <---------MYB52(1)                                --------->ANAC58      <------MYB46(1)                                --------->ANAC55(1)   <------MYB83                                <---------ANAC55(2)   <---------ZAT2                                --------->ANAC58     --------->ALFIN1                                --------->ANAC55(2)  <---------AtMYB61                                --------->ANAC46     --------->MYB55(2)                            <-----------HVH21        <---------MYB46(3)                   <---------MYB46(3)                           --------->ANAC46      ------>ZmHOX2a(2)                       --------->ALFIN1                          --------->LBD16      <---------ARR14(2)     <---------MYB52(1) <---------ANAC46                      --------->ARR14(2) <---------ARR14(2)--------->TCP15(1)            <---------AtMYB61                      ------->TEIL      ================HOX2a_HOX2a  --------->LBD16   <---------MYB46(3)                      <---------ARR14(2)===============HOX2a_HOX2a <---------LBD16    <---------DEAR3(1)                   <---------YAB1       <------ZmHOX2a(1)<---------MYB46(3)           <---------AtMYB61                 --------->YAB1<---------LBD16 --------->ARR14(2)<---------ARR14(2)   --------->ALFIN1 <-------TEIL   <---------YAB1--------->MYB52(1)<------ZmHOX2a(2)--------->ARR14(2)--------->ALFIN1<-   agctacatagagagaggtatgatgaatccgagtcacggaagaggactcggatcggctggtgggtccagctccggtagaaatcaaggaggtggtggtgaga  5756200                                              --------->WRKY38(1)                                              --------->WRKY12                                          <---------TOE2(3)                                         <---------DOF5.7(2)                                        --------->WRKY45                                        --------->WRKY38(1)                                        --------->WRKY12            <-----------GT1             ----------->HVH21                                  ----------          <---------HSFC1(2)           --------->DOF5.7(2)                      <---------ANAC58          --------->HSFC1(2)          <-------GAMYB                ================HOX2a_HOX2a      <        <---------ARR11(3)           <---------ANAC46              ------>ZmHOX2a(2)   <---------ANAC58     --------->HSFB2a(2)             <---------MYB46(3)      --------->YAB1     <---------ANAC58    <     <---------HSFB2a(2)        <---------ANAC58    ------>MYB83 --------->ARR11(3)    <---------ANAC58   <------NtERF2                <---------ANAC58    ------>MYB46(1)=========================HOX2a_HOX2a <---------DEAR3(1)           --------->ARR11(3)  --------->MYB46(3)        <------ZmHOX2a(1)<------- ----------HVH21              <---------ARR11(3)  <---------MYB59<---------ARR11(3)  <------ZmHOX2a(1)   ccgtcgtcgagatgtttccttctggtcttcgagttcttgtcgttgacgatgacccaacttgtctcatgatcttagagaggatgcttaggacttgtcttta  5756300                              <----------DOF2                       <------ZmHOX2a(2)        --------->ARR14(2)    ==================================================bZIP_DOF       <---------CCA1(2)------>ZmHOX2a(2)     <---------ANAC58 <---------ARR14(2)    <-------TEIL      --------->ARR14(2) <---------HSFC1(2)   --------->ARR11(3) --------->HSFB2a(1)  <---------ARR11(3) --------->HSFC1(2)   --------->ARR14(3)                              =============================== <---------HSFB2a(1)  <---------ARR14(3)                              --------->TGA1a >ID1<---------ANAC58 <-----------ARR10                               <---------TGA1a ---------TOE1(2)     --------->AGP1     <------------------------ANAC81 ---------TOE2(2)   ----------->ARR10 <---------AHL20(2)              <---------O2 ---DOF2<---------ARR14(2)   <------------------------ANAC81          --------->O2            -------   cgaaggttcgtatccaaaaaccaagatcttctcttttcatttttttttttttttttttgttcgtttaatctcacgagagagagagagagagagagagaaa  5756400  Previous    Next  AGI:  At3g16857.1    Description:  ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1); transcription factor/ two-component response regulator. Identical to Two-component response regulator ARR1 (ARR1) [Arabidopsis Thaliana] (GB:Q940D0;GB:Q9LIB7;GB:Q9ZWK0); similar to ARR2 (ARABIDOPSIS RESPONSE REGULATOR 2), transcription factor/ two-component response regulator [Arabidopsis thaliana] (TAIR:AT4G16110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44867.1); contains InterPro domain Response regulator, plant B-type (InterPro:IPR017053); contains InterPro domain Response regulator receiver; (InterPro:IPR001789); contains InterPro domain Homeodomain-related; (InterPro:IPR01228 Range:  from: 5755930    to: 5759004    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version