Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <-----------HVH21                                                                     <-----------TGA1                                                                    --------->ANAC58                                                                    --------->ANAC55(2)                                                                    <---------ANAC55(2)                                                                    --------->O2                                                                    --------->ANAC46                                                                    --------->ANAC55(1)                                                                    <---------O2                                                                    --------->bZIP60(2)                                                                    <---------bZIP60(1)                                                                    --------->bZIP60(1)                                                                    --------->TGA1a                 <                                                         --------->GLK1(1)                        ---       --------->ARR11(3)                               --------->ARR14(2)                       ----    --------->ANAC58                                    <---------ARR11(3)                  ---------    --------->ANAC58                                    <---------ARR14(2)      ----------->HVH21<--- -----At4g35610            ----------->TGA1             --------->ARR11(3)    --------->ANAC46  <---- ---->ZAT2                 ----------->HVH21       --------->ANAC46 --------->ANAC58     ----------->RAV1(1) -----ZAT2            --------->ANAC58         --------->CCA1(2)   <-----------STF1  --------->ANAC58 ---->At4g35610       --------->ANAC58    --------->ANAC46        <---------ALFIN1   --------->ANAC58   ctgagcaagtatctcgtatttctcacgctctgacgaaaacttctacgagatagacgcagatatcgagaccacgtcattccccctaacaaggcaacaacat  5731100                                                                 ------->GAMYB                                                                 --------->MYB46(3)                                                           --------->bZIP60(1)                                                           <---------ANAC46                                                           <---------bZIP60(1)                                                           --------->ANAC55(2)                                                           <---------ANAC55(2)                                                           <---------TGA2(1)                                                           <---------bZIP60(2)      ------>NtERF2                                        <---------ANAC58     --------->ANAC58                                      --------->ANAC58     --------->ANAC46                                      --------->O2     --------->ANAC58                                      ==========================================    --------->SPL7                                         ==============MYC_MYB   <------NtERF2                                           <---------O2   --------->ATERF1(1)                                     <---------TGA1a   ------>NtERF2                                           <---------ANAC58   <---------ATERF1(1)                                     --------->ANAC58  <---------SPL7                                         <---------TGA2(2)  ----------->HVH21                                     ----------->TGA1 <---------RAP2.6(2)                                    ----------->HVH21 <---------ANAC46                                      <-----------HVH21 <---------ANAC58                                     --------->ANAC46 <---------ANAC58                                     <---------O2        ----------->GT1 -----------------------TaNAC69(2)                    --------->O2     --------->MYB52(1) ------>ALFIN1                                       --------->LBD16 --------->AtMYB61 --->MYC3                                          <---------LBD16<---------ALFIN1                --- -->RAV1(1)         --------->At4g35610          <---------ARR14(2)------>MYB46(1)               ---- ----MYC3----------->GT1                         --------->ARR14(2)------>MYB83                  ---- -------RAV1(1)     <---------At4g35610     <-----------GT1--------->TGA2(1)               <---------   gtggcggacgccagtaaaactctgctcaattcacttcaattccatttttcgaatccgcgtgacgtaacccacctaagggtttataatccactactttgca  5731200                                                                                                   <-                                                                                                -----                                                                                               ------                                                                         <---------ARR14(2)    ------                                                                         --------->ARR14(2)<---------ALFIN1                                                        <---------ARR14(2)     <----------DOF2 ------                                                        --------->ARR14(2)<---------At4g35610 <------                                                   ----------->GT1      ==================bZIP_DOF<--                                                   --------->LBD16      --------->TGA1a   -----------    --------->TOE2(3)                            <---------LBD16        <---------ALFIN1--------->At4g35610  ------>NtERF2                                  <-------TEIL         <---------ALFIN1  <---------PCF2 <---------ALFIN1                               --------->ARR14(1)  ------>ZmHOX2a(2)   <---------At4g35610 =bZIP_DOF                                      --------->CCA1(2)  <------ZmHOX2a(2)  --------->ABI4(2) ------>DEAR3(1)             <---------O2      --------->ARR11(1) <---------ARR11(3)  <---------ZAT18 ----->ANAC58                --------->O2      <---------ARR14(2) --------->ARR11(3)  <---------DEAR3(1) ----->ANAC58            ----------->RAV1(1)   <---------GLK1(2) --------->GLK1(1)   --------->ALFIN1 -DOF2      <-------TEIL----------->HVH21      --------->ARR14(2)<---------GLK1(1)  <---------MYB52(1)   cccccacctaaaaatgcatcacaagcgcgacaagtgtcaatacaattcagatacggagaatactctgagatcccacatctgctttcggtgggctcacccg  5731300                                    ----------->GT1  --------->At4g35610            ------>MYB46(1) --------At4g35610               --------->MYB52(1)                                              ---- ---->LBD16                      ------>MYB83                               --------->ANAC58     ---- --->ANAC58                    <---------MYB59                              --------->ANAC58     ---- --->ANAC46                    --------->AtMYB61                          ---------->DOF2      <----- --->ANAC58              <---------At4g35610  --------->MYB52(1)         ------->GAMYB        ------- ---LBD16                <------ZmHOX2a(2)    ------>MYB83        --------->ANAC58       --------->YAB1 ---------HVH21          --------->At4g35610  ------>MYB46(1)     --------->ANAC58      <---------ATHB12 >HVH21            --------->MYB52(1)    <-----------GT1          --------->ANAC46  <---------YAB1   catcagataaaaaccctaagctaagggatcagaccaaacagtttaaccaaacgaggttatcaacttatacgacaacgaaagcacttatcaatgataagtt  5731400                                                                            <----------DOF2 <--------                                                                         <---------ARR11(3)--------->AHL20(2)                                                                      <----------DOF2      <---------AHL20(2)                                              --------->ALFIN1     <-----------GT1     <---------AHL20(2)                                           --------->DAG2          <------------------------ANAC81 ----->MYB52(2)                    ------->TEIL                <----------DOF2         <---------YAB1 ----->MYB59  --------->ZAT14   --------->ANAC58               <---------DAG2      <----------DOF2 ----->MYB46(2)                 --------->ANAC46             <---------TOE1(2)    --------------->AGL15 ----MYB52(1) <---------ZAT14   --------->ANAC58         --------------->AtSPL3 ---------->ID1 ----->MYB.PH3(2)       ----------->HVH21 ---------->DOF2--------------->AtSPL8 <-----------GT1    --   agttaacttatcaaactacagtctgtgtgacaaaacgcatcgaagaaagtggagaacaagtcgtacttttttctttatctttttccttttttattaaatg  5731500                                                                      --------->ARR14(2)                                                                      <---------ARR14(2)                                                                     <------ZmHOX2a(1)                                        *TSS                    ------>NtERF2                                       <---------DAG2          --------->O2                                       ==================================bZIP_DOF     --------->AHL20(2)                <----------DOF2         <---------O2     <---------AHL20(2)              <---------At4g35610       --------->TGA1a     ----------->TBP                 --------->At4g35610    ----------->HVH21  --------->TOE1(3) --------->AHL20(2)                <---------WRKY12     =================bZIP_DOF -AHL20(2)                       <-----------HVH21      <----------DOF2--------->GLK1(1) ------->AHL20(2)           <---------LBD16 --------->TOE2(3)  <---------TGA1a --------->TOE2(3)   aaaaaatataaatagaaattttgtagcatctctggggtcagctttttcttaatgttcgctttgcgacgcgaggaaatgcaaccttgaaaccctagaaaac  5731600                                               <----------DOF2                                        -------->P                                        ------>MYB46(1)                                        ------>MYB83                         <---------ANAC58                                      <---------MYB111(1)                    <---------ANAC46                                      <---------MYB59                        <---------ANAC58                                      <---------MYB46(2)          ------>ZmHOX2a(2)                                      --------->AtMYB61          <------ZmHOX2a(2)                                   <---------WRKY18(1)          <---------ARR14(2)                                  --------->WRKY12  --------->ANAC46 <----------DOF2       <---------At4g35610                                  --------->WRKY38(1)           --------->ARR14(2)      <<<<<<<<<TBF1   tcattctcaactacgactaaatcgatttcgcaaactttgacctacccttctttcacgataaacccagatcgcttaaattccttgaatttcttcttctgag  5731700                                                                                          --------->ANAC46                              <---------ZAT6                                              --------->ANAC58                   <----------DOF2                                             --------->GLK1(2)               <---------ANAC58                                               <---------GLK1(2)               <---------ANAC58         --------->TOE2(3)                  --------->ANAC58               <---------ANAC46   --------->MYB52(2)                       --------->ANAC58     <------ZmHOX2a(1)  <---------At4g35610                      <------ZmHOX2a(1)        --------->ANAC58   <---------TOE2(3)    --------->At4g35610          <---------ARR11(3)    --------->ANAC46   agttttaggaaaaaatgtcgtctttgagcagagagttagttttcttaattctccagttcttagatgaggagaagttcaaggaatctgttcacaagtaagt  5731800                           <------MYB46(1)                           <------MYB83                                                       <------                       --------->ATHB12                                                 --------->GLK1(2)                    <---------ANAC58                                    --------->REM1(2)     <------                 <---------ZAT18                                       --------->ALFIN1 <---------ARR14(2)                <---------ANAC58                                     <---------ANAC46   --------->ARR14(2)                <---------ANAC58               <---------ANAC46  <--------P            <---------GLK1(2)       ---------->ID1<----------DOF2      --------->ICU4         <---------WOX13(1)  --------->ANAC58   <----------DOF2  <---------ANAC58 --------->ANAC46          <---------MYB46(3)    --------->ANAC58   ttgtgctttgtcgtttttgtgtgcttgtttggtttctctgcgtaattttgggtataatttggaattggttgatgtgtaggctagagcaagaatctggctt  5731900                             <---------ARR11(3)                  <----------DOF2                --------------->AGL15                         --------->GLK1(2)                 <----       --------->TOE2(3)     --------->ARR11(3)      --------->ALFIN1          ---------->DOF2<------     <---------TOE2(3)   ---------->DOF2   --------->ALFIN1   --------->ARR11(3)        --------->YAB1 <----------DOF2<----------DOF2          --------->ALFIN1     <---------ARR11(3)       <---------YAB1 ---ANAC58 <---------ANAC55(2)     <---------ANAC58<---------ANAC46            --------->ZAT14------- ---ANAC58 --------->ANAC55(2)     <---------ANAC58<---------bZIP60(2)     --------->ZAT6 <---------YAB1   cttctttaacattaagtactttgaagagaaagctcttgctggagagtgggatgaagtggagaagtatctttctggtttcactaaagtcgatgataatcgt  5732000  Previous    Next  AGI:  At3g16830.1    Description:  TPR2 (TOPLESS-RELATED 2). similar to TPL/WSIP1 (WUS-INTERACTING PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G15750.3); similar to TPR3 (TOPLESS-RELATED 3) [Arabidopsis thaliana] (TAIR:AT5G27030.1); similar to TPL/WSIP1 (WUS-INTERACTING PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G15750.4); similar to Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like [Medicago truncatula] (GB:ABD28351.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17486.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79774.1); contains Inte Range:  from: 5731540    to: 5737778    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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