Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->ANAC58                                                                               --------->ANAC58                                                                               --------->ANAC46                                    <---------ANAC55(2)                       ------->TEIL                                    --------->ANAC55(2)                       <---------LBD16                                    <---------ANAC58                      <---------------AtSPL3                                    ----------->GT1                       <---------------AtSPL8                                    <---------ANAC46               <---------ANAC58                            <-----------GT1                        <---------ANAC46                         --------->ALFIN1                          <---------ANAC58                       --------->ZAT2--------->LBD16             <---------DOF5.7(2) -------->ZAT6       <-----------RAV1(2)          --------->MYB52(1)     <------------------SPL14 === ------->HVH21    <-----------GT1   <---------ANAC58<----------ID1<---------TOE2(3)               ---   tgacagtagaaaccaagtattcaccaggtgtcactattccgtaatatgtccataacgacgagctcattaacgtgcaaatgtacggaaaacactcgtattc  5686100              <---------ZAT14              --------->ZAT14              <---------ZAT18           --------->LBD16           <---------At4g35610           --------->At4g35610          --------->ANAC46                           --------->ICU4         <---------LBD16                            <---------TOE2(3)       =======================HOX2a_HOX2a        --------->AHL20(2)       ------>ZmHOX2a(2)                         <---------AHL20(2)      <---------GLK1(1)                      --------->YAB1     <---------ARR14(2)                     <---------YAB1                               --------->YAB1     --------->ARR14(2)------>ZmHOX2a(1)   <-----------GT1                              <---------ATHB12 --------->LBD16   --------->ARR14(2)     --------->YAB1          <-----------GT1     --------->WOX13(1) =============HOX2a_HOX2a                 <---------ICU4    --------->TOE2(3)<---------YAB1 --->ZmHOX2a(1)    <---------ARR14(2)    --------->ICU4   <-----------GT1<---------CCA1(2)      <----   ctccgtcgatctccgctgcactatcctccaaaacgtctccctaattatcattttaatgtttaacttaatttccccatttcttatagttcaatcaaatgtt  5686200                                                                                            ---------            <------ZmHOX2a(2)                                                           --------->YAB1           <---------ARR11(3)                                                          <------ZmHOX2a(2)       --------->YAB1                                       --------->MYB46(3)       --------->YAB1      <---------ATHB12                                      <---------ABI4(2)       --------->MYB46(3)    --------->WOX13(1)                                     --------->ANAC58    --------->ANAC46   --------->AHL20(2)                                      --------->ANAC58    --------->AtLEC2     -   <---------AHL20(2)                                 <----------ID1         <---------ANAC58     <--  --------->AHL20(2)  ---------->DOF2     <-----------RAV1(2)                <---------ANAC58   <---- -------GT1--------->ARR11(3) <---------ZAT6        <------ZmHOX2a(1) <-----------GT1------->GAMYB---   acaaattaatcaagatcatatgtagaaagagagagttaactcacacaggggagaggaagacaagcaccgatataacattccctgcaacgatcatatatat  5686300                                                                      ------->MYC2                                                                      <-------MYC2                                                                      ------->PIF5                                                                      <-------MYC4                                                                      ------->MYC4                                                                      <-------PIF5                                                                      ------->MYC3                                                                      <-------PIF4                                                                      ------->PIF4           <---------AHL20(2)       <---------ANAC46                  <-------MYC3            -------   <-----------GT1         <---------MYB59                           <---------ANAC55(2)      ------- >AHL20(2)--------->AHL20(2)    <----------DOF2                     ------------>OsbHLH66    <------- -------->YAB1            <---------ANAC55(2)             --------->YAB1                   <--------- -------AHL20(2)          --------->ANAC55(2)          <---------At4g35610    <---------AHL20(2) -----AHL20(2)           <-------TEIL    --------->ARR14(2)  --------->YAB1   --------->AHL20(1) ------>AHL20(2)        <-----------GT1  <---------ARR14(2) <---------YAB1    --------->AHL20(2) ----   aaaaataactcattttatagtataagttacataactttgtgggtatatgaaatatgtagatgataataaacacgtgcaaataaaatggtcatgttaccta  5686400    ------>NtERF2    ----------->RAV1(1)   --------->ANAC46   <---------ETT(1) -->TOE1(2)                                      <------ZmHOX2a(1) -->TOE2(2)                                    <---------TOE2(3) --ANAC55(2)                             <---------GLK1(1)     ---------->DOF2 --GT1                             <------ZmHOX2a(1)----------->GT1                              ---- ------->HVH21                   <---------TOE2(3)---------->DOF2             <------ZmHOX2a(1) *TSS   tgactccgacataaaaactcaagtctgccatctctgaggatgggtttctgaggaaagtagatagagaaagacttgaaataggatgagagagatagcaaat  5686500                                                                             <---------YAB1                                                                             <---------AHL20(2)                                                                            --------->TOE2(3)                                                             <---------AHL20(2)            <---------GLK1(2)                                                             --------->AHL20(2)         --------->AHL20(2)                                                  <---------AHL20(2)      --------->AHL20(2)                                                --------->AHL20(2)        --------->AHL20(1)     --------->ANAC58                           <-----------TBP           <---------AHL20(2)     --------->ANAC58                          <---------AHL20(1)         <---------AHL20(1)    --------->ZAT18                  ---------->DOF2        --------->AHL20(2)  <---------TOE2(3)<---   <------ZmHOX2a(1)       <---------ZAT18     --------->AHL20(1)   ----------->GT1     <---------AHL20(2) ----->YAB1<----------DOF2 <---------ETT(2)   --------->AHL20(2)   --------->MYB59--------->AHL20(2)   tataaggacgctactttgtgtttgtccggtccacatatcgaaagacaaatatatatatgtgatttaattttggtaaaatattaatgaaatataaattctc  5686600                                                                                               <-----                                                                                               <-----                                                                                      <---------ANAC58                                                        <-------MYC3                  <---------ANAC58                                                        ------->MYC3                  <---------ANAC46                                                       ----------->GT1               <------NtERF2       --------->At4g35610                           <---------ANAC58       ---------->DOF2    <-----      ----------->GT1                 ---------->DOF2<---------ANAC58   <------ZmHOX2a(1)   <--------  --------->ANAC46         <---------TOE2(3)    <---------REM1(1) --------->ATHB12  <-----------HVH21 -------DOF2           --------->TOE2(3)  --------->ARR11(3)     <---------AHL20(2)<---------ANAC46   tttcaagacagcaaaatgaacagaacattaatgctagactaaaagagctcgtgtagcatgtgaatatttgattaggatgaaagtcgcgtcgtgcatagct  5686700                                                                                          --------->CCA1(2)      <----------DOF2    <----------DOF2                                                 --------->ARR11(1)      <---------DAG2<--------ATHB1                                                   ---------->DOF2 ----ANAC58         <---------ICU4                                                   --------->YAB1 ----ANAC58<---------TOE2(3)                                                     <---------AHL20(2) ----ANAC46<---------TOE1(3)                      <---------AHL20(2)            --------->AHL20(2)  < -CCA1(2) <-----------RAV1(2)     <----------DOF2<---------YAB1           ----------->GT1<---------ARR11(3)   tgttctcacttttcaggttgaataattctttttcttcttttgttcttaatttttaatgacctattggaattgaaaacagtgatttaataaagatttgaac  5686800                                                                           --------->AHL20(2)                                                                           <---------AHL20(2)                                                                       --------->AHL20(2)                                                   <---------ALFIN1    <---------AHL20(1)                                               --------->GLK1(1)       --------->AHL20(1)                          ------->GAMYB      --------->ZAT14           <---------AHL20(2)                       --------->MYB52(1)    <---------ZAT18          --------->AHL20(2)                   <---------ICU4            --------->ZAT18          <---------AHL20(2)                  <---------YAB1      <---------MYB52(1)        --------->TOE2(3)       ----------->GT1 ---------REM1(1) --------->ICU4--------->MYB46(3)--------->ZAT14 --------->AHL20(2)    <---------TOE2(3)   agttgtagtatcacgagaacataattaacggacatcgaccggtaatgtgaactccactcttagaaaacttaaataaattaaactcatattaagaaaaaaa  5686900                                     <---------ANAC58     <---------AHL20(1)                                     <---------ANAC58     --------->AHL20(1)                                   <---------YAB1         <---------AHL20(2)                 --------                              --------->bZIP60(1)   ----------->GT1                      ------>ZmHOX2a(1)            --------->YAB1 ----------->HVH21    ------->TEIL              --------->ICU4--------->TOE2(3)   aacagcttgaactaaaataacacatacctctgacttcatgcttgaacatgtatatagtaatatatcaataagagacattattttgctaatcctaaactta  5687000  Previous    Next  AGI:  At3g16690.1    Description:  nodulin MtN3 family protein. similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT4G15920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44795.1); contains InterPro domain MtN3 and saliva related transmembrane protein (InterPro:IPR004316) Range:  from: 5684365    to: 5686496    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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