Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       ------>ZmHOX2a(1)                                         ---------->DOF2                                      --------->At4g35610                                         ---                              <---------ICU4     --------->ARR11(3)               <---------TOE1(3)                              --------->ATHB12   --------->ARR14(2)               <---------TOE2(3)                             <---------YAB1      <---------ARR14(2)              <-----------RAV1(2)                             --------->ICU4      <---------ARR11(3)             <-------TEIL    -----                        --------->ANAC46 --------->MYB52(1)  <---------ALFIN1  --------->CCA1(2)<----                      <---------ALFIN1<---------At4g35610  ----------->RAV1(1) --------->GLK1(2)-----   ttctacttgtttcttccaaatcacacacttcatcattggaagctaaaggaaaatcctcttgcaacacatcggttttgagagattcaggttttagaccctc  5661600                                                                ------->GAMYB                                                              ------>MYB46(1)                                                              ------>MYB83                                                            --------->MYB46(3)                                                            <---------MYB111(1)                                                            <---------ALFIN1                                                       ------>ZmHOX2a(2)                                                       ==================================HOX2a_HOX2a                                                      ===================================HOX2a_HOX2a                                                      <------ZmHOX2a(2)                                                     <---------ARR14(2)                                                     --------->ARR14(2)                                                    <---------At4g35610                                                 <---------At4g35610                     --------->HSFC1(2)                      --------->ARR11(3)------>ZmHOX2a(1)   <---------MYB55(2)          --------->ANAC58                  ---------->DOF2       <-----------HVH21   --------->AtMYB61           --------->ANAC58    --------->MYB46(3)<---------ARR11(3)======================HOX2a_HOX2a         --------->At4g35610 --->ZmHOX2a(1) ------>ZmHOX2a(1)       =====================HOX2a_HOX2a          ------>ZmHOX2a(1) ------>RAV1(2)--------->TOE2(3)       --------->TOE1(3)    <---------MYB111(2)------>MYB83 -----ZAT2 <---------ANAC58            --------->TOE2(3)   --------->MYB46(3)  ------>MYB46(1) ---->ZAT2 <---------ANAC58          <---------YAB1 --------->At4g35610   <-----------GT1<---------HSFC1(2)   ctgcgaaccaattgcttcctcaaagacctcttcttcattatccttcacttcatcagatcccaccaactcactaattctaccatcctctgcaagcttcttc  5661700                                                                             ------>MYB46(1)                                                                             ------>MYB83                                                                             -------->P                                                                            --------->MYB55(1)                                                                           --------->MYB46(3)                                                                           --------->DEAR3(1)                                                                           --------->AtMYB61                                                                           <---------MYB111(1)                                                                           <---------MYB55(2)                                                              --------->ANAC46 ------->GAMYB                                                              <---------ANAC55(2)------>MYB46(1)                                                              --------->ANAC55(2)------>MYB83                                                    --------->ANAC58       <---------MYB111(2)                                                    --------->ANAC58       <---------MYB46(2)                                            <---------HSFB2a(2)        <---------ZAT14       ------>ZmHOX2a(1)                                            --------->HSFB2a(2)        --------->ZAT14   --------->ARR14(2)              ----------->GT1         --------------->AGL15   --------->ANAC58 <---------MYB59      <           ----------->RAV1(2)        <---------------AGL15   --------->ANAC58--------->MYB46(3)<----         <-----------GT1       <---------ALFIN1  <------ZmHOX2a(2)     <---------ZAT18   <---------ARR14(2)   --------->LBD16         --------->At4g35610 <------ZmHOX2a(1)     --------->ANAC46   <---------CCA1(2)   tcatccccatataacctggttacaatctcagccccatctcccatttctaggatcacccaaaatcacgaaacactgcaccaaccaaattttgtatcctcgt  5661800                                                           <------MYB46(1)                                                           <------MYB83             --------->ANAC58                             <---------TOE2(2)             --------->ANAC58                  <-----------GT1             --------->ANAC46               <---------ICU4<---------TOE1(2)                 ---------           --------->ANAC46                 --------->AHL20(1)                   <-------------------   --------->AHL20(2)    <---------AHL20(2) <---------AHL20(1)                 --------->GLK1(1) ----------DOF2         --------->AHL20(2)  <---------ARR11(3)                 <---------GLK1(1) -----MYB52(1)          <---------AHL20(2)  --------->ARR11(3)               <------ZmHOX2a(1)      -   tacttttaaatccacaagacactaaattaaatgggagtgaaactaatattttccaaatcgtaggtatattttgctcataggaattcagaaaatacaaaga  5661900                                          ----------->RAV1(2)                               <---------ANAC46                       ----------->GT1                      --------->DAG2<-----------ARR10               ---------->DOF2                <------ZmHOX2a(1)  <---------GLK1(2)             --------->HSFB2a(2) ->DOF2       <---------TOE2(3)<---------ANAC58   <---------HSFB2a(2)*TSS --WRI1 --------->ARR11(3)     <---------ANAC58<--------P        <---------HSFB2a(2)          <------ -------->GLK1(2)    ---------->DOF2--------->GLK1(2)      ---------->DOF2                    <------   agaatctattgatattgaggagaaaaagtgatggcgagaatctaacctggttagagaaggcaaaagtctggaaagaaaaaaaaacaacttcatgcgcttt  5662000                                 ----------->RAV1(1)                            ----------->RAV1(2)                      <-----------GT1                   <----------DOF2                            <------ZmHOX2a(1)         --------->AHL20(2)    --------------------->WRI1<---------ATERF1(1)       <------ZmHOX2a(1)    <---------AtLEC2 ---DAG2          <---------DAG2----------->HVH21<---------ANAC46         <----------DOF2       <---- ----DOF2 ----------->TBP   =================RAV<---------LBD16   --------->CCA1(2) ----------->GT1   ttttgtatttgtataaatcgccttttactcgcctgcgacagtgcgactacgacgggaaggagaaggagataagcgactttcatggacggtttaaatcggt  5662100                                                              <-------MYC3                                                              ------->MYC3                                                             --------->bZIP60(1)                                                             <---------bZIP60(1)                                                             --------->ANAC55(2)                                                             --------->bZIP60(2)                                                             --------->TGA1a                                                             <---------ANAC55(2)                                                             <---------ANAC46      <---------PCF2                                                             <---------TGA1a      ----------->TCP11(1)                                                             <---------O2        --------->ZAT18                                                             ========================bZIP_DOF                ----------->GT1                              ========================bZIP_DOF               <---------DEAR3(1)                       --------->ANAC58      <-----------RAV1(1)              <---------ORA47(1)                        --------->bZIP60(2)   --------->ALFIN1            ----------->HVH21                           --------->ANAC58  <---------ZAT14            <---------SPL7                       ======================bZIP_DOF --------->ALFIN1           --------->TOE1(1)                     ---------->DOF2       --------->YAB1           --------->TOE2(1)               ----------->GT1   --------->O2 ---------->DOF2      <-----------GT1                      --------->YAB1<-----------HVH21--------->ZAT14 -----MYB52(1)--------->SPL7              <---------ATHB12----------->HVH21--------->DAG2   <--------   ttgggttttaacatcggacggtggaaaatggctcttatattgcaatcgtgaaaaaggcatgtcacgtgatcaatagtaaagtgtgggccaaggccttttt  5662200                                                                                             <-------                                                                                            <--------                                                               <----------DOF2          --------->ATHB12               <-----------RAV1(1) <----------ID1           ---------->ID1             <---------YAB1      <------NtERF2                --------->ANAC46 <---------DAG2                  <----------DOF2   <---------At4g35610         <----------DOF2      <----------DOF2             ------->GAMYB<-------   --------->At4g35610    <---------AHL20(2)       <---------ANAC58           --------->At4g35610 --DOF2    --------->GLK1(2)<-----------GT1        <---------ANAC58           <---------At4g35610 <--   agttgggctgcataatcttgttggccattttatctttacgacaagagagaattgctttatttgttcttttggagctattcaactgtcttttcattggttg  5662300                            <---------AHL20(2)                            --------->AHL20(2)                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                     <-----------ARR10                     <---------AGP1                              ------>MYB83                     --------->ARR14(3)                        <---------------AGL15                     --------->ARR14(2)                        --------------->AGL15                < --ANAC58            <---------ARR14(3)                       <-----------------AGL1         -------- -MYB46(3)           <---------ARR14(2)                       ----------------->AGL3    <---------YAB1 --ANAC58            <---------ARR11(3)         <---------AHL20(2)                 --------->At4g35610 ---------GT1        --------->ARR11(3)        --------->AHL20(2)------>MYB46(1)   <---------At4g35610   tcactatatagatggtatttgaagatcttattaattgttagaaatttgattttatatatggctcaccaaattttgaaacattttcagatgataaatggtt  5662400                                                               <------ZmHOX2a(1)                                                         --------->HSFB2a(2)             --------->ATHB12                            <---------HSFB2a(2)           <---------MYB52(1)                           <---------LBD16          <-------GAMYB                              <----------DOF2   <----------DOF2   ---------->DOF2               --------->ZAT2           ------------------------>ANAC81   <---------DAG2--------->YAB1                    <---------At4g35610      ----------->GT1      ---- -----------GT1<---------WOX13(1)             <---------ARR14(2)      <------ZmHOX2a(1)         ----- --->GT1  <---------At4g35610                 --------->ARR14(2)<---------ARR14(2)            -------   ttatactttttcagttgattgataaaagagtttgattcacattgacagtatccagctttctgggaggatagaggagaagagaaaaataagaaacacaaaa  5662500  Previous    Next  AGI:  At3g16620.1    Description:  ATTOC120 (Arabidopsis thaliana translocon outer complex protein 120); GTP binding / P-P-bond-hydrolysis-driven protein transmembrane transporter. similar to ATTOC132/TOC132 (MULTIMERIC TRANSLOCON COMPLEX IN THE OUTER ENVELOPE MEMBRANE 132), transmembrane receptor [Arabidopsis thaliana] (TAIR:AT2G16640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47350.1); similar to hypothetical protein OsI_033387 [Oryza sativa (indica cultivar-group)] (GB:EAY79428.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ64902.1); contains InterPro domain Chloroplast protein import component Toc86/159; (InterPro:IPR00569 Range:  from: 5658323    to: 5661969    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g16630.1    Description:  ATKINESIN-13A/KINESIN-13A; microtubule motor. similar to kinesin motor family protein [Arabidopsis thaliana] (TAIR:AT3G16060.1); similar to central motor kinesin 1 [Gossypium hirsutum] (GB:AAQ18797.1); similar to internal-motor kinesin [Nicotiana tabacum] (GB:AAZ79373.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74575.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) Range:  from: 5662390    to: 5667809    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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