Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <-----------GT1                                                                           XX      --------->YAB1       <----------DOF2                                                       <---    --------->AHL20(2)   --------->At4g35610                                                    <----   --------->YAB1        <---------At4g35610               <---------LBD16              <---------TOE2(2) ----->ANAC58          --------->ZAT18                    ----------->RAV1(2)           <---------TOE2(3) ----->ANAC46          <---------ZAT18 --------->ZAT14 <---------ZAT18    --------->WRKY18(1)   ----- ----->ANAC58  <----------DOF2 <---------TOE2(3) --------->MYB52(1)<---------YAB1       <---------TOE1(2)   agccataaaaataacaactttgaagtgagctttgagataagtatagtcacataccagtgcccctggatgatttttggtcaagagtcttccaaggtttgga  5628500                                       --------->GLK1(2)                                       <---------ARR14(2)                                       --------->ARR14(2)                                      <---------ARR14(1)  <---------------AGL15    --------->TOE2(3) XXXXXXXXXXXXXXXXXXX>MIR833-5P      ------->GAMYB ------GLK1(1)           --------->ARR11(3)                                                     <---- -----ARR14(2)           <---------ARR11(3)                         <----------DOF2          >>>>>>>ZML2 ---->ARR14(2)<---------ZAT6<----------DOF2                   <------ZmHOX2a(1)      <---------ALFIN1   tttgctatactcggtagagttagagaatacctttacaaccgaatccagcaccaattcatcaagaggatgactttcttctattttcttccaccgttctagc  5628600                                                                           <---------At4g35610                                                                           --------->At4g35610                                                                           <---------ZAT2                                            --------->ANAC46            --------->At4g35610                                  <---------HSFB2a(2)                   <---------At4g35610                         <---------CCA1(1)  --------->ANAC58            --------->LBD16                        --------->ARR14(2)  --------->ANAC58           --------->ANAC46       ------>ZmHOX2a(1)                        <---------ARR11(3) <-----------------AGL1 <---------ALFIN1          ---------                        <---------ARR14(2)--------->MYB52(1)   --------->ANAC46            ------>ZmHOX2a(1)                      ----------->GT1     <---------DOF5.7(2)  --------->ANAC58       <---------At4g35610                   <---------ANAC58     --------->DOF5.7(2)    --------->ANAC58    <---------At4g35610                   <---------ANAC58   --------->ANAC58       <---------ALFIN1      --------->At4g35610                   <---------ANAC46   --------->ANAC58       --------->ANAC46     --------->ALFIN1 -----GLK1(2)     --------->ATHB12--------->HSFB2a(2)      <---------ALFIN1--------->ZAT2 <---------ALFIN1   ttcttctcatcttcatgtattgagtggatatttcttcggcaagttaacgcaaatggaagaaacacacccctctccgctgctgatgtgctgctcctcctgc  5628700                        --------->ATERF1(2)            <---------HSFB2a(2)            --------->HSFB2a(2)         <---------ARR11(1)         ------->TEIL   --------->DEAR3(1)         <---------ARR14(2)         --------->ARR14(2)         --------->GLK1(2)        <---------ARR14(1)        <---------CCA1(2)------>NtERF2       --------->LBD16  <---------DEAR3(1)      <---------------AGL15      --------->ANAC55(2)<---------ATERF1(1)      --------------->AGL15        <---------DOF5.7(2)     <-----------------AGL2       <-----------GT1     ----------------->AGL2    <---------MYB46(3)     ----------------->AG<---------SPL7     <-----------------AGL1   <---------MYB52(1)     <-----------------AGL3  <-------GAMYB                     <---------ICU4     ----------------->AGL1 <---------MYB46(3)                 --------->ATHB51   <---------ARR14(2)   <---------ATERF1(2)                    --------->ATHB12   --------->ARR14(2)  --------->ATERF1(1)   --------->At5g28300   <-----------GT1     --------->SPL7 <-------GAMYB    --------------->AtSPL3       ---------->DOF2  <---------GLK1(1)   ------>NtERF2<---------At5g28300 --------------->AtSPL8  ---------->DOF2 -->RAV1(2)<---------LBD16<------NtERF2<---------MYB52(1)     <---------YAB1--------->At5g28300   atatatatccgtatctggaaactcggccggccgttgttaccgttggcagtgaattggtcagtacattattgcaacttcggtaaaagaaaagagaagagag  5628800                                                                                            <------MYB46(1)                                  <---------SPL7                                            <------MYB83                              <---------ALFIN1     <------NtERF2                           <---------DEAR3(1)                             --------->MYB46(3)   ----------->GT1                          --------->MYB111(2)                            --------->SPL7        <------NtERF2                            <---------AtMYB61                          <-----------TCP11(1)    --------->LBD16                          --------->MYB46(2)                         --------->ATERF1(2)     --------->RAP2.6(2)                       --------->MYB55(2)             <---------ZAT2<---------PCF5       <---------LBD16                            --------->MYB111(1)             --------->ZAT2--------->PCF2     --------->DEAR3(1)                           <---------MYB46(3)      <---------ARR14(2) --------->MYB46(3)  --------->ANAC58                             <--------P      --------->ARR14(2) <---------ATERF1(2) --------->ANAC46                             <---------MYB55(1)     <------ZmHOX2a(1)  --------->DEAR3(2)   --------->ANAC58                           <---------MYB46(3)  <---------LBD16      --------->MYB52(1)  --------->MYB52(1)        <------------CBF----------->RAV1(2)   taaaccaggaacccgagctctcgagtaccggcccaccgtatgaacacacggccggaaaaacatatcaagcttattggaaaatcgaacccctggttggtgc  5628900                       <-----------GT1                   <----------DOF2       --------->YAB1                     ------>ZmHOX2a(1)                   ------>ZmHOX2a(1)    <---------ATHB12     ---------->ID1--------->TOE1(3)            <------ZmHOX2a(1)   <----------DOF2  <-----------GT1           --------->TOE2(3) <-------   tactgtttaaaataggaagtccttttttctcttccttttctaatcaaattttttccattttttgtcttcaaaagtttccttaacttatcgtagagaattg  5629000                           <----------DOF2                          <---------DAG2                          --------->TOE2(3)                                             <-----------GT1                       <-----------GT1                                             <---------AHL20(2)                    <----------DOF2                      <---------YAB1       <-------TEIL                   --------->TOE2(3)                   --------->YAB1       --------->ARR14(2)              <---------MYB52(2)                      <---------ATHB12  <---------At4g35610      <---             --------->ANAC58              ----------->GT1              --------->At4g35610 ---------             --------->ANAC58             <---------TOE1(3)      <----------DOF2   --------->AHL20(2) -----CBF    --------->ANAC46             <---------TOE2(3)---------->DOF2  <---------ARR14(2)  -----   gtttgttttttctccaaggaacctttaacctttttttttttttgaaggttaaacaaatcatcaaaggctttaccagcagattcatttttttaactagcgg  5629100                                                                                 --------->AHL20(1)                                                                                 <---------AHL20(1)                                                                                 <---------AHL20(2)                                                                      --------->ARR11(3)                                                                      <---------ARR11(3)                                                                   <---------AHL20(2)                                                                   --------->AHL20(2)                                                               --------->ICU4   <---------AHL20(2)                                                             --------->AHL20(2) --------->YAB1                                                             --------->YAB1     --------->AHL20(2)                                                          --------->YAB1       <---------YAB1              --------->AtMYB61                         --------->AHL20(1)   <---------ICU4 -----P    --------->AtMYB61                            --------->AHL20(2)   --------->YAB1     <---- >MYB52(1) <---------ALFIN1     <---------YAB1         --------->YAB1<---------CCA1(2)          ----- ---->At5g28300         --------->ALFIN1             --------->AHL20(2)     <---------YAB1 <---------AHL20(2)   tagatgtataagaccacctccaacgagtgggacgatgaaagtctctaaaaaaccaaaaaataataatatttaaatcttataattatattctatttttttt  5629200                                                                                 --------->YAB1                                                                             <---------ICU4                                                                             --------->ATHB51                                                                             --------->ATHB12                         ----------->GT1                          --------->HSFB2a(2)<---------ARR11(3)                        <---------TOE2(3)                         <---------HSFB2a(2)--------->ARR11(3)                       --------->DAG2              ------>ZmHOX2a(1)        <---------YAB1                      ---------->DOF2             --------->TOE1(3)       <---------ICU4                  <----------ID1                  --------->TOE2(3)      <---------YAB1------>ZmHOX2a(2)             <---------ATHB12             <---------AGP1 --------->MYB52(1) --------->ICU4 -----AHL20(2)---------->DOF2          --------->HSFB2a(2)     <----------DOF2xxxxxxxxxxxxxxxxxxxxxxx ---->AHL20(2)--------->AHL20(2)       <---------HSFB2a(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   taatacagactaccaataaaacgataaaggtatatttgtttgtagaactgttccttaaataagggcttttagaacatcattattgatgatctcttaagac  5629300                              <---------ANAC46                              <---------ANAC58                  <---------ARR11(3) <---------MYB52(2)                                           ---                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                             <--             --------->CCA1(2)<---------ANAC58                                              ---------             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                    <---------ANAC46     <---------YAB1      <---------ICU4                                               <---------ANAC55(2)    <---------TOE2(2)    --------->YAB1    ---------->DOF2                           --------->MYB59    <---------TOE1(2)   <---------YAB1 --------->MYB52(1)                  <---------AHL20(2)    <--- >smallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            <----------DOF2  <xxxxxxxxxxxxxxxxxxx   aattcttatgttaagagacaggtcttataatggcttataactaacaaaagtctcttatttaagagactttaagacattttttttagttatgtataagaca  5629400  Previous    Next  AGI:  At3g16540.1    Description:  DEGP11 (DEGP PROTEASE 11); serine-type peptidase/ trypsin. Identical to Putative protease Do-like 11, mitochondrial precursor (DEGP11) [Arabidopsis Thaliana] (GB:Q9LK71); similar to DEGP12, serine-type peptidase/ trypsin [Arabidopsis thaliana] (TAIR:AT3G16550.1); similar to Os05g0417100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055560.1); similar to hypothetical protein OsJ_017802 [Oryza sativa (japonica cultivar-group)] (GB:EAZ34319.1); contains InterPro domain Peptidase S1 and S6, chymotrypsin/Hap; (InterPro:IPR001254); contains InterPro domain Peptidase S1C, HrtA/DegP2/Q/S; (InterPro:IPR001940); contains InterPro domain Peptidase Range:  from: 5626296    to: 5628863    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version