Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------     --------->DAG2      <-----------HVH21                                        <<<<<<<<<<<<<<<<<LFY    ---------->DOF2<----------DOF2                                    --------->ATHB12        <------ ------->GT1      <---------DAG2                                 <---------ZAT14--------->AHL20(2) ------>GT1    <-----------GT1                      <-----------RAV1(1) <---------WOX13(1)  --------- -->ZAT14     --------->KAN4(2)      <------ZmHOX2a(1)       <------ZmHOX2a(1)  ---------->DOF2   ggaaaaaaaaggagattataccttttctgtgagatgtgaggaacagaagtggttttgttggaaggagagaagtgattgccattaaaacagtggaaagatt  5614000                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                                                                      --------->ANAC46                                                                                <------MYB83                                                                                <---------MYB46(3)                                                          --------->ARR11(3)    <------MYB46(1)                                                          <---------ARR11(3)   <---------AtMYB61                                                         --------->YAB1     --------->LBD16                                                  --------->At4g35610     <---------LBD16                                                <---------WOX13(1)      <---------ALFIN1                                               <---------ANAC58         --------->AtMYB61--------->TOE1(3)                                               <---------ANAC58         --------->DEAR3(1)   -------- -->ARR11(3)             <---------CCA1(2)    --------->ATHB12         --------->MYB46(3)--------->TOE2(3) ---ARR11(3)           <---------ANAC58      <---------YAB1 ------>ZmHOX2a(2)  --------->ALFIN1 -->ARR10              <---------ANAC58<<<<<<<<<TBF1   <---------WOX13(1)--------->MYB52(1)  <-------   tgtcttctgtttccttcttgatgtttcttatctctgtgttcttcttcttgattgctgaatgatcttcttcatcaccaccgggtggtccaagccttagctc  5614100                        <---------ANAC58                        <---------ANAC58                 <-----------RAV1(1)              ------>ZmHOX2a(2)          ------>ZmHOX2a(1)        =====================RAV                  <---------ANAC46                            <------        ----------->RAV1(2) ---------->ID1        <---------ANAC58                            <------ ->At4g35610--------->ARR14(2)                    <---------ANAC58                            <------ --At4g35610<---------ARR11(3)    --------------->AtSPL8        <---------ATHB12   --------->GLK1(1)   aagtttcttctcctgatctgtgttgttcttgtcttcttggtaccatttccttccttgtggaatcaaatcaagaagttttggaccgatttctctgtttctt  5614200      ------>MYB46(1)      ------>MYB83                      <---------DOF5.7(2)   <---------HSFB2a(1)                <---------MYB52(1)   --------->HSFC1(2)                 --------->DOF5.7(2)   --------->HSFB2a(1)               --------->TOE1(3)                                        -------   <---------HSFC1(2)    --------->GLK1(2)                                                <----------DOF2 ---ANAC58              <---------GLK1(2)          <---------AHL20(2)                    ------------ ---ANAC58         ------->GAMYB     --------->TOE2(3)                                   <----------- ---ANAC46       -------->P         --------->ANAC46                    --------->ANAC46-------------   ggacaaccttccattgatcaacccaagattccttctatacgttaactatgtatgaaattgaaatctatagcttcactaaaccctaagaaccccttttaaa  5614300                                                                        <---------ANAC46                                                                      <---------MYB46(3)       ----------->RAV1(1)                                           <---------AtMYB61 --->DOF2--------->ANAC46                                        --------->ZAT14 --->AGL15                                        <---------TOE2(3)  --------->ALFIN1           <---- ----AGL15                              <---------ANAC46         <---------ZAT14           ---------- ---->AGL3  --------->MYB52(1) ---------->DOF2 --------->ICU4    --------->ZAT18  <-----------GT1   gaaacaatcccacaaaactgagagcgagagagagaaagagagatgtgtaatgaaggtatggtaagagagcagtggtgggattttatacaaaatcaaagct  5614400                            <---------MYB46(3)                           <---------ANAC46                   --------->ANAC46                   --------->ANAC58                --------->ZAT18                *TSS    <---------AtMYB61                <---------ZAT18                                                                   ---                --------->ZAT14                      <----------DOF2                            <----             <---------ANAC58<------MYB83--------->ANAC46                                       <----     <-----------GT1  <----------DOF2    <---------ALFIN1        ------------>CBF            --------   <-----------GT1 --------->ANAC58   ----------->HVH21   <-----------GT1                   <-------- ------DOF2  <---------ANAC46<------MYB46(1)        <---------DAG2       ---------->ID1     --------- >DOF2       <---------ANAC58<---------DEAR3(2)<---------DAG2<----------DOF2            ---------->DOF2   ttttttttctctctctcgtgcacgctttggtgggttctctctcacacagccttacctttttttctttctcaatttgttgttctctctctctaaagattct  5614500                                                                                      ---------->DOF2                                                                                   --------->ANAC58  <----------ID1                                                                   --------->ANAC58 ------->DOF2                             >>>>>>>>>SARD1                          --------->DAG2 -----HSFB2a(2)                      ----------->GT1                             ---------->DOF2 -----YAB1             <------ZmHOX2a(1)  >>>>>>>>>CBP60g                     ----------->GT1 ->GLK1(2)      --------->AHL20(2)---------->DOF2                            --------->DAG2 -GLK1(2)   ----------->GT1  ---------->DOF2                                --------->DAG2          < >ARR11(3)  ------------------------>ANAC81         <---------AtLEC2       ---------->DOF2   <-------   gaaagggacgagaagagaaaaaataggaatacaaagaaaaggaaatttggatttgtatgaacaaaaaaaaactcagaaaaaggtaaagcaaagtagagtg  5614600                                                           <---------ANAC58                       --------->DAG2                      <---------ANAC58    <----------DOF2   ---------->DOF2             <-----------GT1    <---------DAG2  <---------------AGL15    <---------AHL20(1) <---------ALFIN1  ----------------->AGL3    --------->AHL20(2)            --------->At5g28300 ---------ZAT14    ----------------->AGL2    --------->AHL20(1)   --------->ANAC58            ------- --ZAT6      ------>ZmHOX2a(1)               <---------AHL20(2)   --------->ANAC58         --------->AtLEC2   actccacttttactcctaaaccccaaaagtagaaatgaaaactacaataaatttacagattgcataccaagaaaaacagtaattgttcttgacatgaaaa  5614700                                                            <---------ANAC46                              <---------TOE1(3)             ----------->GT1        <----------DOF2                              <---------TOE2(3)        <---------ANAC46          ---------->ID1                            <-----------GT1         <----------DOF2    <---------ANAC55(2)     ----------->GT1      <----------DOF2        --------->ARR11(3)    --------->ANAC55(1) <---------ARR14(2)    <------MYB46(1)           <---------ARR11(3)    --------->ANAC58 --------->ARR14(2)    <------MYB83             <---------GLK1(1)      --------->ANAC55(2) <---------ZAT14     --------->ALFIN1           --------->GLK1(1)      --------->ANAC46       ------- --->DOF2     ---------->DOF2<-----------GT1  <------ZmHOX2a(1)        --------->ANAC58 <-----------GT1   gagaatactgtgaaaaaaaagaagtgggttttaacgtttttggttttaggagttcttttgtggagtaaaacacacgcaaccttgtctttttttctgcctc  5614800                                                                                         <---------ANAC58                                                                                         --------->ANAC55(2)                                                                                         <---------ANAC55(2)                                                                                    <---------AHL20(2)                                                                                <---------ICU4                                         --------->ALFIN1                      <---------ATHB51                                        --------->ZAT18                        --------->ICU4                                       <---------ANAC58                        --------->AHL20(2)                           ---------->DOF2  <----------DOF2                    <---------AHL20(2)                       ----------->GT1 <---------ANAC58                      --------->YAB1         <            <---------TOE2(3)      ---------->DOF2                      ----------->GT1  <---------ANAC58            <---------TOE1(3)   --------->ANAC58               --------->ARR14(2)  --------->AHL20(2) -->TOE2(3)--------->MYB52(1)   --------->ANAC58               <---------ARR14(2)  <---------AHL20(2)   aaatatcgctaattaagggtttgtctagtaaaagaagcaaagcgtgctgttctgtttctcacaagtatacgaattagaaaaataattaaatgcgtaattc  5614900  Previous    Next  AGI:  At3g16500.1    Description:  PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1); transcription factor. Identical to Auxin-responsive protein IAA26 (IAA26) [Arabidopsis Thaliana] (GB:Q8LAL2;GB:Q9LK75;GB:Q9ZSY7); similar to IAA18 (indoleacetic acid-induced protein 18), transcription factor [Arabidopsis thaliana] (TAIR:AT1G51950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45812.1); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525) Range:  from: 5612506    to: 5614416    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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