Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->At4g35610                                                                             <------NtERF2                                                                            ------>NtERF2                                                                          ------>NtERF2                                                                          <---------LBD16                                                                          --------->LBD16                                      <---------At4g35610                --------->DEAR3(1)                                      <---------ZAT2                    --------->ATERF1(1)                                <-----------HVH21                      --------->At4g35610                                ------>NtERF2                          <---------At4g35610                                --------->ABI4(1)                      --------->ZAT2          ------                               --------->DEAR4(1)                   --------->ZAT2            -------                               --------->DREB2C(2)                  <---------At4g35610       -------         <---------ANAC58      --------->ANAC58                     <---------ZAT2            ------- <---------At4g35610           --------->RAP2.6(2)               --------->TGA2(2)            ------- --->ZmHOX2a(1)             --------->AtMYB61                   <-----------TGA1              ------- -->ARR11(3)          ========================RAV               <-----------HVH21             ------- ---ARR14(2)          ----------->RAV1(2)--------->ZAT2        <---------ANAC46       <---------At4g35610 ---ARR11(3)        <-----------GT1   --------->At4g35610      <---------ANAC58       --------->At4g35610 -->KAN4(2)   <---------ANAC55(2) --------->DEAR3(1)           <---------ANAC58    <---------At4g35610 -->ARR14(2)  <---------ANAC58 ------->GAMYB               --------->At4g35610     --------->At4g35610 ---TaMYB80   <---------ANAC46 --------->ANAC58            <---------At4g35610 <---------MYB46(3) ->HSFB2a(1)  <---------ANAC58 --------->ANAC46           ------->GAMYB<---------ATERF1(1)  -------->P --HSFB2a(1)  <---------ANAC55(1) ----------->RAV1(1)    <------------AtMYB77<---------At4g35610 --GLK1(1)    --------->ANAC55(2) <---------ALFIN1       --------->MYB46(3)<------NtERF2  --------->MYB46(3) ->GLK1(1)   --------->MYB52(2)--------->DEAR3(1) --------->At4g35610 --------->DEAR3(1) --------->At4g35610 ->KAN4(1) <---------MYB52(1) --------->MYB46(3)  <---------At4g35610--------->MYB46(3)  <---------At4g35610 --KAN4(1) <<<<<<<<<MYB98   <---------ALFIN1     --------->DEAR3(1) --------->At4g35610 --------->RAP2.6(2) ->TaMYB80<-------GAMYB ----------->HVH21--------->At4g35610  ------>NtERF2<---------DEAR3(1)-------- -KAN4(2)<---------ANAC58  --------->MYB46(3)  <---------At4g35610<-----------RAV1(2) --------->ZAT2   ctccgcttcttccgttacttgttaacctgaccaccgccacagcagcttgagccgctgcaaccgctgcgtcagcagccgcggctgtagcagcagcaaccgc  5605300   <---------TOE1(2)  <---------ANAC58                                                      <----------DOF2  --------->ANAC55(2)                                                   =============================  <---------ANAC46                   <--------P                        --------->HSFC1(2)          <-  <---------ANAC58                 ----------->GT1                     --------->HSFB2a(1)         ==  <---------ANAC55(2)             --------->ANAC58                     <---------HSFC1(2)          <- --->LBD16                     --------->LBD16                         <---------HSFB2a(1)     ------ -->RAP2.6(2)                 --------->HSFB2a(2)                 --------->HSFB2a(2)          ------ >GAMYB <---------MYB46(3)    <---------HSFB2a(2)            <---------ZAT2  --------->LBD16 -------- -->ANAC46                    --------->ANAC46               --------->ZAT2<---------LBD16  <-------- -->TOE2(3)                  <---------LBD16                 <---------At4g35610            --------- -->ANAC58                 --------->ARR14(2)                --------->At4g35610           --------->MYB46(3) -->ANAC58                 <---------ARR14(2)    <-----------RAV1(2) <---------ARR11(3)    <---------ABI4(2) ->MYB46(3)       <----------DOF2 --------->ANAC58 --------->MYB52(1)--------->ARR11(3)    <---------MYB55(2)   aatcgcgtgtttgttctgttctttgtctgtttccgcaaggtaagttctgagccagacggagtcagcttggagaactttccggtgaatgttagaaccaccg  5605400                   --------->ARR14(2)                   <---------ARR14(2)               <---------LBD16               <------NtERF2             <---------DEAR3(1)          <---------O2          <---------TGA1a          --------->ANAC46          --------->TGA1a          --------->O2 <---------ALFIN1--------->LBD16 --------->REM1(1)<------NtERF2 ===================bZIP_DOF ----------HVH21--------->LBD16 ===================bZIP_DOF ---------DOF2<---------ATERF1(1)                                                 <-----------ARR10 --->DEAR3(1)--------->DEAR3(1)                                                  <---------ZAT2 --->DREB2C(2)------>NtERF2           <----------DOF2                            <---------At4g35610 ->MYB52(1)<-----------HVH21    <----------DOF2                                  --------->ZAT2 -ALFIN1  =================================bZIP_DOF                              --------->At4g35610 >AtMYB61 =================================bZIP_DOF                    --------->MYB46(3)         <--   gcttcacctccaacgtcgccggaaacacagttctctttctctttgctcttcttcataccaaaaatacccttgaaccatctcgcagctcttcccatcttct  5605500                       --------->WRKY18(1)                                                <---------ANAC58                      <-----------HVH21                                                   <---------ANAC46                      --------->At5g28300                                                 <---------ANAC58                     ----------->GT1                                                  <----------DOF2                  --------->MYB52(1)                       ----------->HVH21          <---------DAG2           --------->YAB1            ---------->DOF2     <---------At4g35610       <---------ARR11(3)           --------->AHL20(2) --------->DAG2             --------->At4g35610       --------->ARR11(3) --------DOF2 ---------->DOF2---------->DOF2         <---------ANAC46          ---------->DOF2   ctttcaattcaaattataaagaacggtcaaaaaaagttttaaagagagaaacgtttcggagatgacaaatcacaaatacccaaaagaacttttcgtatgc  5605600                          --------->ZAT18                        --------->ANAC55(2)                        --------->ANAC46                        --------->ANAC58                        --------->ANAC58                       --------->RAP2.6(3)                       <---------LBD16                       <---------At5g28300                                               --------->CCA1(2)                      --------->MYB52(1)                                --------->At5g28300                      <-----------GT1                                  ----------->GT1 --------->CCA1(2)          <------ZmHOX2a(1)                                  ---------->DOF2    ---------->DOF2 -----   agaaaatgaagaggaaaacaaaatttacggcactgaaactgaagacacaatgtgatgttttgagaaaggagaactgtaaaaaaaaagagagataagaagt  5605700                                                                    ---------->DOF2                                                                   <---------AHL20(2)                               <-------TEIL                      ----------->TBP                            <------MYB46(1)                    <---------------AGL15                      <---------ANAC46                         <-----------TBP                      <   *TSS         --------->GLK1(2)      --------->YAB1 <-----------GT1     <---------YAB1           <-   ---------->DOF2    <---------WOX13(1) --------->AHL20(2)  --------->AHL20(2)                 ----- ------------------->ANAC81 <------MYB83 <---------AHL20(2)  <---------AHL20(2)      <---------AHL20(2)   tcaagaaaagagagagagaatgtgatggataggttcttcaaaaataaatataagtatcaccatttatatataaagtattatttgaatttaaacttgagca  5605800                                                                            ---------->DOF2                                                                         <---------ANAC55(2)                                                                         <------MYB83                                                                         <------MYB46(1)                                                                         ----------->GT1                                                                        --------->MYB111(1)                                                                        --------->MYB46(2)                                                                        --------->MYB52(2)                                                                        --------->MYB59                                                                       <---------MYB55(1)                                                                      <---------MYB52(1)                  --------->YAB1                                     <-----------HVH21               --------->YAB1                                     ------->TEIL ------ZmHOX2a(1)<---------YAB1  ------->TEIL              <---------AHL20(2)       ----------->GT1 ---------ID1 <---------YAB1     <-------TEIL     <---------YAB1<---------ABI4(2)  ----------->GT1 <- ----->DOF2<-------TEIL      --------->MYB59  <---------ANAC46  --------->ZAT18 --------->ALFIN1<----   aaggacaaataggttgattataaaaactagttatgtacatttgttatggagtatttttgttttaaatgcaccgttaggtaaagaggggctaaaaactttt  5605900                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                           --------->ARR11(3)                                ------->TEIL                                               <---------ARR11(3)                             <---------ANAC55(1)                                          <---------RVE1(1)                             --------->ANAC55(2)                                          <---------GLK1(1)                             <---------ANAC46                                             --------->CCA1(1)                             <---------ANAC55(2)                                          <---------CCA1(1)                           --------->MYB52(1)                                             --------->GLK1(1)                           <---------DOF5.7(2)                                            --------->RVE1(1)    --------->ANAC46   <---------TOE1(3)                        <---------AHL20(2)       --------->ARR11(3)  <-----------GT1      <---------TOE2(3)                        --------->AHL20(2)       <---------ARR11(3) --------YAB1          --------->DAG2 <---------YAB1         --------->YAB1            <---------TOE2(3) -----YAB1         --------->YAB1  <---------AHL20(2)<---------ATHB12        <-----------HVH21 <-----   gattatacgatatagcttcaagtataaggtaacgtattttataattcaaaaactaatgaacaatattaaaaaacttaagcgtcagatttaagatatctta  5606000                  <---------AHL20(2)                 --------->AHL20(2)             <---------AHL20(2)            --------->AHL20(1)            --------->AHL20(2)            <---------AHL20(1)      <---------At4g35610 -------------AGL15                      <---------AHL20(2) ------------>AGL15                      <-----------GT1 --------------AGL2             --------->ANAC58 ------------->AGL3    <-----------RAV1(1)  <----------DOF2     ----------->GT1                  ---- ------GT1  <---------AHL20(2)  --------->ANAC58      ---------->DOF2               <---------YAB1  -   ctattttcagcaaataaaattttatatgttgctcaagaaatattaacttttgaacaaaaagaagaatagtttatatttctagttttgtcattgtaagaca  5606100                                                                                        -------->ATHB1                                                                                        <--------HAHB4                                                                                        <---------ICU4                                                                                        --------->ATHB12                                                                                        --------->YAB1                             <---------AHL20(2)                                        <---------ATHB12                             --------->AHL20(2)                                        --------->ICU4                            --------->AHL20(2)             --------->YAB1    ---------->DOF2                            <---------AHL20(2)            <---------ATHB12--------->ANAC58                   --------->ARR11(3)          ----------->RAV1(1)        --------->ANAC58  <---------MYB52(1) --------->TOE2(3)     ----------->HVH21    <----------DOF2     <------ZmHOX2a(1) ----->MYB52(1)   --------->CCA1(1)      --------->At4g35610    <---------DAG2--------->DAG2 ---------->GT1   --------->RVE1(1)   <---------ATHB12    <---------YAB1  --------->ANAC46   aacagttacttcatttgaaaataccttgaatttaatttcaatgaactgacaacagttgtaatcatactttttgaacacgaaaagtaggaatcattactca  5606200  Previous    Next  AGI:  At3g16490.1    Description:  IQD26 (IQ-domain 26); calmodulin binding. similar to IQD27 (IQ-domain 27), calmodulin binding [Arabidopsis thaliana] (TAIR:AT1G51960.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69979.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 5603906    to: 5605703    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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