Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <---------------AtSPL3                                           <---------ZAT6    <<<<<<<<<GATA-1                                           ----------->GT1  <-----------GT1        <-----------GT1                                   ------>ZmHOX2a(1)    <----------DOF2           <-----------GT1                                  --------->TOE2(3)   ------->TEIL         <---------YAB1   <-----------GT1            <---------HSFB2a(1) --------------->AtSPL8 --------->YAB1       ------- ---------->GT1               --------->HSFB2a(1) <---------------AtSPL8--------->ICU4<----------DOF2   aaatgtaacatgctattacatagtcacatagaacatcctaaaatagggttaaaatgtacttttatctatttgcaattttgatattttcctttctgaaaaa  5592200                                 <---------RVE1(1)                                 <------ZmHOX2a(2)                                --------->ARR14(3)             <---------AHL20(2)                                <---------ARR14(3)         --------->AHL20(2)         <---------AHL20(2)                                --------->ARR11(3)         <---------AHL20(2)        <---------ARR11(3)                                <---------ARR11(3)        <---------AHL20(1)         --------->ARR11(3)                                <---------ARR14(2)        --------->AHL20(2)         <---------AHL20(1)                   <----------DOF2                        --------->AHL20(1)         --------->AHL20(1)                --------->ARR11(3) <----------DOF2        <---------AHL20(2)        --------->CCA1(2)        ----------->GT1         --------->ARR14(2)     --------->AHL20(2)          --------->ARR11(3)    <---------ARR14(2)         --------->RVE1(1)       <---------AHL20(2)          <---------ARR11(3)    --------->ARR14(2)      ---------->DOF2           --------->AHL20(2)      --------->MYB52(1) --->DOF2       <---------ARR11(3)------>ZmHOX2a(2) --------->TOE2(3)      --------->TOE2(3)   gattagtatatggcaaattatcttttagataaaagatcttttgttctgactatacattaatttattttaaaaaaaaaacttaacagatatatttgcaaat  5592300                                                                                              <------                                                                                            <--------               ---------->DOF2      --------->GLK1(2)                <---------YAB1        <---------ARR11(3)      ----------->GT1          --------->TOE2(3)                --------->WOX13(1)         <---------      <---------YAB1         --------->GLK1(2) --------->AHL20(2)  --------->YAB1          <---------AHL20(1)    --------->YAB1       --------->TOE2(3) ---------->DOF2 --------->DAG2                  --------->AHL20(1)   --------->ICU4        --------->YAB1----------->HVH21  ---------->DOF2        ---------->DOF2   acaaaatgatgaaaaataaaagggataccataatctaaaatctgacaaagaaaatatacaaaaagtcaattacgatacttagaaaaagaactatatattt  5592400                                                            <----------DOF2       --------->YAB1                                                       <---------ANAC55(2)        <---------ICU4                                                  --------->ATHB51                -------->ATHB1                                                  --------->YAB1                  <--------HAHB4                                                  <---------ICU4                  --------->ATHB51                                                  -------->ATHB1                 <---------ATHB51                                                  <--------HAHB4                 <---------YAB1    <------MYB46(1)             <---------At4g35610    --------->ANAC55(2)       --------->ICU4    <------MYB83                --------->At4g35610  <-----------GT1  --------------->AtSPL8        -  <--------P                --------->ARR14(2)   <---------ATHB51     <---------------AtSPL8     <--- ---AHL20(2)                <---------ARR14(2)   <---------YAB1    <---------AHL20(2)            <--- -AHL20(2)              <---------At5g28300      --------->ICU4    --------->AHL20(2)            <--- --------AGL3          <-----------GT1           <---------ATHB12 <---------AHL20(2)<---------YAB1  -   ttgggtagggaagttcaaaaacaaattaccgatttgctgactatatgagcaattattacatacttttatttatttgtacaacaattattacacatacttg  5592500            <---------WOX13(1)          --------->ATHB12         --------->ICU4         <---------YAB1      ------>MYB46(1) <------------CBF      ------>MYB83<---------AHL20(2)      -------->P --------->AHL20(2)  <---------ANAC46                 <---------ICU4     ----------->RAV1(1)             <---------ANAC58                 --------->YAB1 -------->ZAT18  <---------AHL20(2)  <---------ANAC58                <---------AHL20(2) ------ANAC58 <---------AHL20(2)    <-------TEIL                 <---------AHL20(2) ------ANAC58--------->AHL20(2)    <---------ANAC46    --------->ARR11(3) ------ANAC46<---------AHL20(2) <-----------RAV1(1) --------->YAB1<---------AHL20(2)              <-- -------->WRKY38(1) <---------AHL20(2)             <---------YAB1--------->AHL20(2)     *TSS     ----   tgtggaccaacatgattaattttatattggccatatggtgcgtagtaaatgttataataacttgaaattaaataataactaagctcgactcgatatatag  5592600                               --------->YAB1                            ------>MYB83   <---------ATHB12         ------>MYB46(1)   --------->MYB46(3)     <---------MYB111(1)  ------>MYB83            <---------MYB59                                      <---------ALFIN1  -------->P             --------->ANAC58                            --------->ANAC55(2)  ------>MYB46(1)        --------->ANAC46                            <---------ANAC55(2) ----ZmHOX2a(2)          --------->ANAC58           --------->YAB1 <-----------RAV1(2) ----->AGP1              --------->ANAC55(1)       <-------TEIL   <------ZmHOX2a(2)           <------   atccaaccagtagcctctcttattcacacctaatcttcatcttcatcttcgcattcatagtctctacgatcaggtaatccccctctctctatctatcttt  5592700                                                       <----------DOF2                                                      ------>ZmHOX2a(2)                                                      ==============HOX2a_HOX2a                                                    --------->ARR11(3)                                                    <---------ARR11(3)      <-----------GT1   <------                                             <---------ATHB12   --------->TOE2(3) ------->GAMYB                                           --------->WOX13(1)------>ZmHOX2a(1)    --------->YAB1 <---                                         ===========================HOX2a_HOX2a   --------->AtMYB61 ----DOF2 ------->TEIL                   <------ZmHOX2a(2)   <---------CCA1(2)   --------->MYB46(3)   catatatgtgtgtatgtgtaaactatctatattctgaaaatagatcaatcaattgatcttttcctatctcaattgttttcacaaccatcagtttgacttt  5592800                                                        ------->GAMYB   <---------WRKY18(1)                                                       --------->MYB46(3)                                                       <---------MYB111(2)                                         <---------ARR11(3)            --------->WRKY12                                --------->ZAT14        <---------MYB55(2)    --------->At4g35610       <---------TOE2(3)        <---------ZAT14        <---------MYB52(2)    --------->ZAT2       <---------TOE1(3)     <---------At5g28300      ------>MYB83     --------->WRKY45 ------>ZmHOX2a(2)       --------->WOX13(1)----------->GT1        <------MYB46(1) ----DOF2              <---------YAB1    --------->ARR11(3)       <------MYB83 <----------DOF2 ------YAB1          --------->YAB1  ---------->DOF2  ------>MYB46(1)  --------->WRKY38(1)   tgatcgtttaaggctcgagagaattatcattcactgtagtaaagatagtttataccaacaaacccatttggtgttgaccagctttcaacataagtatgag  5592900                              --------------->AtSPL8                                            <----                             <---------ANAC58                                                   <----                       <---------TOE2(3)                                                        <----                    <---------YAB1                                                        -----------                 <---------YAB1                                                           <----------           --------->LBD16   <---------ANAC46                                            ------------         <---------LBD16     <---------ANAC55(1)                    --------->AHL20(2)   <-----------       <---------ARR14(2)    <---------ANAC58            --------->YAB1  --------->YAB1  ------------       <<<<<<<ZML2<---------ZAT6  ------->TEIL      --------->MYB46(3)  ----------->GT1  <-----------       --------->ARR14(2)   --------->MYB52(2)     -------->P  ------>ZmHOX2a(2)       <-----------GT1   ttagagctagaaccggattagtattaatgttacttgtacctgttcatagtactaaccaaaaatgatccaaaaaaatgaaaataacaaataaaccatttat  5593000                                                                                 --------->TOE2(2)                                                                                 --------->TOE1(3)                                                                                 --------->TOE2(3)                                                                                 --------->TOE1(2)  <---------YAB1                                                            <---------MYB52(2) -----TOE2(3)                                                              --------->ZAT2 -----YAB1----------->GT1                                               <---------ZAT14 -----TOE1(3)                                              --------->DAG2  --------->At4g35610 ---->AGL15                                              ---------->DOF2--------->ZAT14 -----AGL15                                           --------->ANAC58  <---------ZAT18     <------ZmHOX2a(2) ----->AGL2                        <---------ANAC46   --------->ANAC55(1)  <---------At4g35610     -- ------AGL2               --------->MYB46(3)     <------ZmHOX2a(2) ---------->DOF2         --------->ARR11(3) ----->AGL3    ---------->DOF2     <---------ANAC58   --------->ANAC46  --------->ZAT18    <---------ARR11(3) ------AGL3 >>>>>>>>>GATA-1        <---------ANAC58   --------->ANAC58 --------->ALFIN1  ----------->ARR10   ggttatcacagatagataaaagaagtcaacaacgatgtcttgggacgatggatcacacgcaaaggtgaagaaagtgcagctaaccttcgatgagatcatc  5593100  Previous    Next  AGI:  At3g16460.1    Description:  jacalin lectin family protein. similar to MBP1 (MYROSINASE-BINDING PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G52040.1); similar to jasmonate inducible protein [Brassica napus] (GB:CAA72271.1); contains InterPro domain Mannose-binding lectin (InterPro:IPR001229) Range:  from: 5592588    to: 5595716    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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