Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------AHL20(2)         --------->AHL20(2)      <---------AHL20(2)                                  <---------At5g28300     --------->AHL20(2)                          --------->YAB1 ---------->GT1                                 <---------ATHB51       <---------------AtSPL8 -HSFB2a(2)                          --------->ANAC55(2) <-----------GT1          <---------ANAC46 >HSFB2a(2)                       <---------MYB52(1)  <----------DOF2--------->ICU4   aattgtattatatatatactcttggttctaatttctcttaggtgatttcaattatacttttactgtttgaaataatgtacaatgctgtggaaacatgttc  5581300                          --------->YAB1         --------------->AGL15                       --------->WOX13(1)        ====================================================                     --------->MYB46(3)          <---------------AGL15                           ----                    --------->ANAC58        <-----------HVH21                                    ----                    --------->ANAC58   --------->DAG2                   --------->AHL20(2)       ----                   --------->WOX13(1) --------->DAG2                    <---------AHL20(2)       ----                --------->TOE2(3)    ---------->DOF2              <---------ANAC46         <---------                <-----------HVH21 ------>ZmHOX2a(1)        <---------GLK1(1)              <----------   ttacaagacttatcaaatcgtcaaccaattagagtcctaaaaagggggtcactaattgtagaattctgacttatataaattgcaacttgcaccctttaca  5581400            --------->YAB1     <---------ANAC46     <---------ANAC55(2)     ----------->GT1    <---------TOE2(3)   --------->MYB52(1)                                       ------>NtERF2 =====MADS_MADS                                          <---------ZAT2 ----->ANAC46  <---------AHL20(2)                        <---------At4g35610 ----->ANAC55(1)<---------AHL20(2)                       --------->At4g35610 ----->ANAC58  <---------AHL20(1)                     <---------ANAC58 ----->ANAC58  --------->AHL20(2)                     <---------ANAC58 -DOF2  ------->TEIL <-----------GT1           --------->ICU4         --------->ATHB12   ---------->DOF2 -----AGL15<---------AHL20(2)           ---------->DOF2  --------->ZAT2       ----------->RAV1(1)   agtaataacgtatataataaaattgacgactctgtgaattttaaaagaactaattagcttgctgccatcgtttcattggccaacaccaatataaagacga  5581500                                                                                         --------->ANAC46                                                                                         <---------ANAC55(2)                                                                     --------->AHL20(2)  --------->ANAC58                       --------->DAG2                       <---------MYB52(1)           --------->ANAC58                ----------->GT1                            --------->LBD16               --------->ANAC55(2)            --------->ALFIN1        ------->TEIL          <---------HSFB2a(2)         <------ZmHOX2a(2)        --------->At4g35610   <---------ARR14(2)          --------->HSFB2a(2)   <---------ANAC46        --------->ZAT2---------->DOF2                    <---------LBD16        <---------O2        <       --------->GLK1(2)      --------->ARR14(2)  ------->TEIL  --------->ICU4  --------->O2   ------   ttagttgagaagctgtggaagtaaaaaaggagtatatgaatatttgaacatgtatttcttccggtaatgttttaaatatgcctcgtggatcacgaaataa  5581600                                           <---------ARR14(2)                                          --------->GLK1(1)                                         --------->ARR14(2)                                 --------->ARR14(2)                                <---------------AGL15                                ------>ZmHOX2a(1)                              ------>ZmHOX2a(2)                            <---------ARR11(3)                            --------->ARR11(3) ----------->GT1                           --------->YAB1<---------ARR14(2)                          <---------ATHB12<---------GLK1(1)                      <------ZmHOX2a(2)--------->LBD16    <---------YAB1    =================HOX2a_HOX2a                   *TSS      <---------ATHB12  ---- ---------GLK1(2)     ------------>CBF ----------->GT1               ----------->TBP     ---------->DOF2 --->YAB1     <---------------AtSPL3 <---------LBD16           ------------>CBF<---------YAB1   <----   tagattattatttctgctagtacgatcaatgatcctatatgcggatatatggttatatgcaagaagtcaatataaacacctatgattcacttaaatcgat  5581700                                                                                                  ---                                                                                                  ---                                                                                              <------                                                             <--------ATHB1                   <------                                                             -------->HAHB4                <---------                                                             --------->ATHB51              ----------                                                             --------->ATHB12             <----------                                                             <---------ICU4               <----------                                   ------>ZmHOX2a(1)        <---------AHL20(2)            -----------                       <---------CCA1(2)                    <---------YAB1                -----------                       --------->At4g35610                  <---------ATHB51              -----------                       <---------At4g35610                  --------->ICU4                ----------- ----->YAB1<----------DOF2   <----------DOF2             >>>>>>>>>GT-1           ---------->ID1------ --ZmHOX2a(2)      <-----------HVH21                  ----------->GT1   <-----------GT1 <-----------GT1   cacaatctactcacttttgaaggtcatctctcttttcctctctattagtacaaaattggttaataattgaaaattcacaatttgtttttttttccaatta  5581800       --------->YAB1 ------>YAB1 -------->GT1                                                                                       < ---ATHB51                                                                                       ---- ---ATHB12                                                                                     ------ ------AGL15                                                                                   <----- ----->AGL15                                                             --------->MYB46(3)   <------ -------AGL3                                                            --------->ANAC58      <------ZmHOX2a(2) -------AGL2                                                            --------->ANAC58  ------>ZmHOX2a(2) ------>AGL3            --------->ANAC58                             --------->ATERF1(1) <------ZmHOX2a(2) ------>AG              --------->ANAC58                             <------NtERF2      --------->ARR14(2) ------>AGL1         --------->At4g35610             ---------->DOF2--------->ANAC58    <---------ARR14(2) ------>AGL2  <---------WOX13(1)          --------->DAG2            --------->ANAC58    ------->TEIL- --->YAB1  <---------YAB1 --------->YAB1---------->DOF2       ---------->DOF2      <XXXXXXXXXXXXXXXXX   tagtaactatagtaagattgatcagcaagcaaaatatggctcaaaaggttgaagcaaaaggagggaaaggaggcaaccaatgggacgatggatccgatca  5581900     ----------->HVH21  <------NtERF2 ------>NtERF2   <---------TOE1(3) ---------bZIP60(1) ------->TGA1    <---------TOE2(3)                                            --------->MYB52(1) --->YAB1       <-----------RAV1(2)                                   --------->MYB52(1) ----ICU4      <-------TEIL  <---------LBD16                   <---------bZIP60(1)           ------>ZmHOX2a(1) ---ATHB12    --------->GLK1(2)         --------->GLK1(1)      --------->ANAC55(2)   --------->MYB46(3) -------->bZIP60(1) <--------P   <---------ARR14(2)            <---------ANAC55(2) ------>MYB46(1) XXXMIR842    --------->CCA1(2) <------NtERF2                  <---------ANAC46    ------>MYB83   tgacgccgtgaccaagattcaggttgcagtaggcggaatgggaattcaatacattcagttcgattacgtcaagaacggacaaaccgaacaaactcctctt  5582000                                      ------>ZmHOX2a(1)                                  <---------ARR14(2)                                --------->ARR11(3)                                --------->LBD16                                     <---------ARR11(3)                              <---------LBD16                                       --------->GLK1(2)                              ------>ZmHOX2a(2)                               --------->HSFB2a(2)                              ===============HOX2a_HOX2a    <-----------GT1   <---------HSFB2a(2)                            <---------ARR14(2)       <---------ANAC58      <---------YAB1                            --------->ARR14(2)   <---------ANAC58         --------->AHL20(2)           --------------->AtSPL8 --------->ARR14(2) <---------ANAC58    <---------ICU4          <---           --------------->AtSPL3<---------MYB52(1)  <---------ANAC46   --------->ICU4          <----      ---------->DOF2   <---------At4g35610      <---------ANAC58       <---------------AGL15  <-----   cgtggtatcaaaggcagtaccattccaactgatccggttcctatacattttccttgcttatttgacttcttctaatttttatagaaaatctattgtttta  5582100                                                   ------>ZmHOX2a(1)                                                 ----------->RAV1(2)                                                ------>MYB83                                      <---------YAB1   <------ZmHOX2a(1)              <-----------GT1                              --------->ZAT14   ------>MYB46(1)                 <------MYB83                              <---------ZAT14 ------->GAMYB                     <------MYB46(1)                          ------>ZmHOX2a(2)  --------->MYB46(3)                 ----------->GT1 ------ANAC46             ====================================HOX2a_HOX2a      --------->MYB59 -----TOE2(3)             ================================HOX2a_HOX2a        >>>>>>>>>CBP60g ------GT1              <---------ARR11(3) <-----------GT1 --------->GLK1(2) >>>>>>>>>SARD1   cgttgaagtattgacatattgaacttgatctctacagtttgtgattaaccatcctgaggagcatctagtttctattgaaatttggtataaacctgatggt  5582200  Previous    Next  AGI:  At3g16430.1    Description:  jacalin lectin family protein. similar to PBP1 (PYK10-BINDING PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT3G16420.3); similar to PBP1 (PYK10-BINDING PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT3G16420.1); similar to PBP1 (PYK10-BINDING PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT3G16420.2); similar to jasmonate inducible protein [Brassica napus] (GB:CAA72271.1); contains InterPro domain Mannose-binding lectin (InterPro:IPR001229) Range:  from: 5581669    to: 5583193    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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