Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------ATHB12  <---------ALFIN1 --------->At4g35610 <---------At4g35610 -------At4g35610 ------>At4g35610 ----At4g35610                                                                         ----------->GT1 --->At4g35610                                                                         -------------- -->ALFIN1                       <-----------GT1                              <---------ANAC55(2) -----RAV1(1)   --------------->AGL15      ---------->DOF2                    --------->ANAC55(2) ->ZAT14        <---------------AGL15   --------->AtLEC2        <----------DOF2     ---------->DOF2 --ZAT14       --------->ANAC46 <-----------GT1         --------->YAB1      --------->AHL20(2)<------   tgcagcactcattttctactcaatagagttttatttatctccctgcaaagacaaaaaatcatatagctttgagcaaaattacataagaaagctaaaaaaa  5528200                                                                                              <------                                                                                              <------                                                                                          --------->GLK1(1)                                                                                      <---------ANAC46                                                                                     --------->MYB52(1)                                                        <---------YAB1               <---------LBD16                                                  ------->TEIL                    <---------At4g35610                                           <---------YAB1                         --------->At4g35610       <---------ATHB12                 <------ZmHOX2a(2)                        ----------->ARR10 ---------->ANAC81                     --------->ARR11(3)                     --------->TOE1(3)    <- ----ID1            <----------DOF2    <---------ARR11(3)                   <---------TOE1(3) -------   caaaaacaaatcaattttgcgactttaattcacttgggcaagatcaatattgaatcttgcgattgaaatcactaatctaagcttagctacgggtttctag  5528300                                                                                      <---------ATHB12                                                                                --------->ANAC58    -                                                                                --------->ANAC58    <        ---------->DOF2                                                         --------->ANAC46    < ---HSFB2a(2)            --------->DAG2                                     <---------WOX13(1)  ----- ---HSFC1(1)            ---------->DOF2    --------->ANAC58              <---------YAB1--------->YAB1 -----ZmHOX2a(1)     <------ZmHOX2a(1)     --------->ANAC58          ----------->GT1--------->WOX13(1) -->HSFB2a(2)      <---------TOE2(3)      <---------TOE1(2)       ----------->GT1------>NtERF2  <----   aggattaatcgaaagaaaattgaggaaaaagttcaacaaaatcgcaagttactgggttttaaacgagaaggtagtaagattgacgccaatcatcgaagac  5528400          ===============================HOX2a_HOX2a          <------ZmHOX2a(1) -------->ZAT14 ---------ZAT14  <-----------GT1                                                                  <-- ---------ZAT18  --------->YAB1             <xxxxxxxxxxxxxxxxsmallRNA(i)           --------->ALFIN1 ---------->AtSPL8         --------->MYB52(1)                        <------ZmHOX2a(1)          <---- -----------AtSPL8 --------->ZAT6 ------>ZmHOX2a(2)                <---------TOE2(3)            -----   agtacacaaataggagtaatcacactatctaatggatcgatggagagggagagagagagagcaaaccttgaggatgaaaatggaggtgtttgaatttcag  5528500                                                   <--------P                       --------->ANAC58          --------->LBD16                 <------NtERF2                             --------->ANAC58         --------->LBD16                --------->ALFIN1                            <----------ID1        <---------LBD16                 <------NtERF2                               --------->ANAC46     --------->GLK1(1)                  <----------CDC5                    --------->GLK1(2)     <---------GLK1(1)                 <---------LBD16                    <---------ARR14(2)    <---------GLK1(1)        --------->At4g35610 <------MYB46(1)          --------->ARR14(2)   <------ZmHOX2a(1)         <---------At4g35610 <------MYB83             <---------GLK1(2)         < --------DOF2          <--------P      ------>NtERF2                      --------->ARR11(3)        < -----At4g35610    <-----------RAV1(2)<---------ANAC46                    <---------ARR11(3)     ---- ---->At4g35610 --------->At4g35610  --------->ZAT18 ----------->GT1    ----------->ARR10    --------   ctttaggaatcccggagaagctcaggtagagagctcaagggcgcggagggaaggtaagtgaaaccctagaaaccaagattctgaaaacgcaaaattcaag  5528600    --------->ANAC58                                                             --------->HSFB2a(1)    --------->ANAC58                                                        --------->HSFB2a(2) <---------SPL7                                                     --------->MYB111(2) ----------DOF2                                                ---------->DOF2   <---------HSFB2a(1) ---------DAG2                                           <---------ARR14(2) <---------HSFB2a(2) --->GAMYB ----------->TGA1                     <------------CBF    <---------MYB46(3)             <- -->DOF2*TSS    ---------->DOF2    ------------>CBF   ----------------->AGL1<-----------RAV1(2)  ----   cgccttacgaaaaatgacgaaagtagccttgcatttgtacaatgggtttgaattgggcctatttggaaagttgttggcccagaaggtttcttcaacatat  5528700                                                                                        <---------WRKY45                                                                                        <---------WRKY38(1)                                                                                        <---------WRKY12           --------->YAB1                                                     <---------YAB1        ------->GAMYB                     <---------AHL20(2)               --------->ICU4       --------->MYB46(3)                <---------AHL20(2)                <---------YAB1     <-----------GT1                     --------->AHL20(2)  <---------At4g35610<---------AHL20(2)   <---------KAN4(2)             ----------->GT1            --------->ANAC58 <---------AHL20(1) --------TOE2(3)               ----------->GT1              --------->ANAC58 <---------AHL20(2) <---- ------>DOF2   <---------GLK1(2) <---------ANAC46     <---------ANAC46<---------ZAT6   --------->WRKY18(1)   aaaggaataaccatcaaaattctcaatccaacatggtgtaaaattaaatggttgtaacttgtaagctaatttgtgttattatttttttggtcaacaatac  5528800                                  --------->AHL20(2)                  -------->P<---------ARR14(2)                                                 ------            <---------ARR14(2) --------->TOE2(3)                                              -------            --------->ARR14(2) --------->TOE1(3)                                   ------>ZmHOX2a(1)   --------->ARR11(3)       --------->ARR14(2)                     --------->ARR11(3)        <-------   <---------ARR11(3)   --------->YAB1                     ---------->DOF2        --------->TOE1(3)  --------->CCA1(1)    <---------ATHB12                 --------->TOE2(3)         --------->TOE2(3) <  --------->RVE1(1)  --------->WOX13(1)      --------->GLK1(1)     <---------ARR11(3)  --------->TOE2(3) -----ANAC55(2)  <-----------GT1------>ZmHOX2a(1)     <---------YAB1            <---------YAB1<------   ataaatatctagcatatacttaccaattagtatccttaaaatgtgagaattctattagcattaatgcaatatctctcatcttatccttaacttaatttaa  5528900                                                                        --------->AHL20(2)                                                                --------->TGA2(2)  --------->GLK1(2)                                            <-----------TGA1 <---------GLK1(2)                                            --------->ANAC46 --------->ARR11(3)                                           <---------ANAC55(2) <---------ARR11(3)                                           --------->ANAC55(2) ---->DOF2                                                    <<<<<<<<<<HY5           ------>ZmHOX2a(2) -->AHL20(2)                      --------->YAB1              --------->ANAC55(1)    <------ZmHOX2a(2) --AHL20(2)                    --------------->AGL15          --------->ANAC58      <---------ARR11(3) ---------RVE1(1)              <---------------AGL15          --------->ANAC58      --------->ARR11(3) ---AHL20(2)              <----------DOF2                    <-----------STF1   ---------->DOF2   agagattttgagtatgttttcacaaatacttttctaaaataagaagaaatactcaagttagaatacgtcatcgttttaatacaaaagatcgttttgaaag  5529000                                                                   <---------ICU4      ------->GAMYB                                                               --------->AHL20(2)   --------->MYB52(1)                                                               --------->ICU4<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                 <----------DOF2           --------->DAG2      <---------AHL20(2)   <-----------GT1               ------>NtERF2 --------->MYB52(1)         --------->ALFIN1    <---------MYB46(3)      <               --------->LBD16            ---------->DOF2 ----------->GT1   --------->MYB52(2)      -              <---------ANAC46   --------->At5g28300    ----------->GT1 <---------ANAC46        -----             <---------LBD16----------->HVH21         <---------ANAC58  <---------ANAC58    <--------            <---------At5g28300 ----------->GT1       <---------ANAC58  <---------ANAC58<-----------HVH21   gtttaagagaaaattgccgcgtttttttatctaacggttatacaaaaagtcgtttagggtgtgaaaaaattatcgcgtttgttatttaacggtcacataa  5529100  Previous    Next  AGI:  At3g16310.1    Description:  mitotic phosphoprotein N' end (MPPN) family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO45841.1); contains InterPro domain Nucleoporin, NUP53 (InterPro:IPR017389); contains InterPro domain MPPN (InterPro:IPR007846) Range:  from: 5526420    to: 5528608    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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