Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------ARR11(3)                                                            --------->ARR11(3)                                                   <----------DOF2            <---------ETT(1)                     ------>NtERF2         <---------ARR14(2)                     --------->RRTF1(2)         --------->ARR14(2)                     --------->RAP2.6(2)         --------->GLK1(2)                      --------->RAP2.3(2)        <---------HSFB2a(1)                     --------->DEAR3(1)        --------->GLK1(1)                    --------->DEAR3(1)        <---------GLK1(1)                   --------->DEAR3(2)                                   ----     <------ZmHOX2a(1)               --------->ANAC46     <---------YAB1                    ---------    ----------->GT1              --------->YAB1 --------->RRTF1(3)         --------->DAG2 --------->YAB1 ---------->AGL15               --------->ICU4 --------->RAP2.3(1)  ---------->DOF2  --------->MYB46(3) -----------AGL15               <---------YAB1------>NtERF2--------->YAB1 ---------->DOF2<---------ATHB12   actaataggaaaatccgacccaaatttttgactaattataagacataccgccgctataccatgatattgtcaaagaaaaagtttctaaccaataaccact  5505000                         <---------WOX13(1)                       --------->ATHB12                      <---------AHL20(2)                  --------->AHL20(1)                  --------->AHL20(2)                                                    <---------ARR14(2)                  <---------AHL20(2)                                                    --------->MYB52(1)                 <---------AHL20(2)                                             --------->YAB1                 <---------ATHB51                                            <---------ICU4         <---------ARR11(3)                   <-----------GT1                --------->YAB1         --------->ARR11(3)      --------->ZAT14                            <---------ATHB51     ---------->DOF2  <---------YAB1      --------->KAN4(2)                 <---------ATHB12 ----->ZAT14     <---------ATHB12<---------ZAT14                            --------->ICU4   -------- >MYB46(3)       --------->AHL20(2)      <---------KAN4(1)       <---------ANAC46       --------->ARR14(2)   atagactaaaagatttcaaataatttgattgatactgcattgaacattctacaattctacttatattgtgtagttcaaataatgagaacatatcggaaag  5505100                                                                                               <-----                                                           <---------AHL20(2)                  ------                                                           --------->AHL20(2)                  <-----                      <---------ANAC46                   <---------AHL20(2)                    <-----                      <---------ANAC55(2)                --------->AHL20(2)                    ------                <---------YAB1                         <---------AHL20(2)                   ---------      <----------DOF2 <---------ANAC58                 --------->AHL20(2)                  <---------AHL20(2)    <---------RAP2.6(3)                              --------->AHL20(2)             <-----------GT1   --------->ANAC46------->TEIL                    --------->AHL20(2)      --------->AHL20(2) -------   --------->RAP2.6(2)<---------ANAC58             <---------AHL20(2) --------->AHL20(1)  --------->AHL20(2) -->DOF2    <---------GLK1(2)        <-----------GT1 <---------AHL20(2)    <---------AHL20(2) <------   actagccgctattagattatgaatgcgtatgaatacattatacattatagtatatatatatatatatacacatatattaaaatgtattactatataataa  5505200                                                                            ------>ZmHOX2a(1)                                                                           <---------MYB59 ----AHL20(2)                                     <---------AHL20(2)     ------>MYB46(1) --->AHL20(2)                                    <---------AHL20(1)      ------>MYB83<---------ATHB12 ----ICU4                                   <-----------HVH21         <---------At4g35610 ---ATHB1                            <---------ANAC46                 --------->At4g35610 --->ATHB51                          <---------ANAC58                 --------->HSFC1(2) >YAB1           ---------->DOF2     <---------ANAC58                 <---------HSFC1(2) -->ICU4<---------ZAT14              --------->ANAC55(2)              --------->HSFB2a(1) ---YAB1--------->ZAT14              <---------ANAC55(2)              <---------HSFB2a(1)   tttgtcttagtatagtactcaaagaaatagagttttcttacgtagatgtcatatattttagtcattttaggcaccttcctaactcaaatcacgaatagaa  5505300                                                               ----------->RAV1(1)                                                               --------->AtMYB61                                                              --------->ANAC46                                                            --------->ANAC58                                                            --------->ANAC46                                                            --------->ANAC58                                                            <---------ALFIN1                                                          <---------ALFIN1                                                          --------->AtMYB61                                                         --------->MYB46(3)                                                         --------->ANAC46                                                        ------>MYB46(1)                                   <---------AHL20(2)   ------>MYB83                                  --------->AHL20(2)   --------->ANAC46                                  <---------AHL20(2)  ------->GAMYB                      <-----------TBP                              <---------AHL20(2)      --------->MYB46(3)               --------->AHL20(2)                              --------->AHL20(2)--------->ANAC58             <---------AHL20(2)                          <---------ATHB12      --------->ANAC58            --------->AHL20(2)           ----------->GT1--------->ICU4        --------->ANAC46    <---------GLK1(2)  <---------AHL20(2)   cttatgtagcaaaatgtaaacacatgaaatcatttattaattcgggtccaacgtaacccaccacaccacagaaactcattaaatagtatttttttataaa  5505400                                       ---------->DOF2             --------->YAB1                                      <---------AHL20(2)    <---------ARR11(3)                                  ------>ZmHOX2a(1)         --------->ARR11(3)                                  <---------------AGL15   --------->DAG2           <---------AtLEC2--------->ARR14(2)         --------->YAB1                       <---------          *TSS    <-------TEIL    --------------->AGL15 ---------->DOF2       --------->ANAC46   acttaagttatatgcatggatacatgaacgatactcctatataaagagaacagcattcaaaaggtcttatcatcttcttcactaaacaaaaaaaaaccct  5505500                                                      <---------MYB46(3)                     --------                                                    <---------MYB52(1)                --------->HSFB2a(2)                                                   <----------DOF2          --------->ZAT2  ---------                                                 <---------ANAC58           <---------ZAT2  <--------                                             <---------At4g35610            --------->At4g35610                                        <---------ANAC46             <-------TEIL     <---------HSFB2a(2)                     <<<<<<<<<TBF1      <---------ANAC58       --------->YAB1     <---------ANAC58          ------>ZmHOX2a(1)             <---------ANAC58    <----------DOF2 <---------At4g35610  ---- --GT1   --------->TOE2(3)     --------->REM1(1) <---------ANAC58<---------YAB1   <---------ANAC58   tcaaaacatttccttattctttcttcttcatctacaacaatggctggagttgcctttggttcctttgatgattcattcagcttggcttctctaagagctt  5505600                          <----------DOF2                                                          --                    --------->ZAT14                                                          ------>ZmHOX2a(2)                    <---------ZAT14                                  --------->ZAT14<---------AHL20(2)                   <----------DOF2                                   <---------ARR14(2)    <---------ARR11(3)   <----------CDC5 <---------DAG2                                    --------->ARR14(2)    --------->ARR11(3) ->At4g35610    <---------ALFIN1                         <---------ANAC58       <---------AHL20(2)<-- >ARR11(3)  <---------At4g35610                   ------>NtERF2   <---------ANAC46  <---------ATHB51 -ARR11(3)  --------->At4g35610         --------->ALFIN1 <---------ANAC58       --------->AHL20(2)--- ---->P  <-------TEIL<-----------GT1    <-----------RAV1(1)      <-------TEIL----------->GT1<------ZmHOX2a(2)   acctcgctgagttcatctccactttactctttgttttcgctggtgttggctctgccattgcctacggttcgtatactcgtagttaaataatgggatctaa  5505700                                                                                   <---------At4g35610                                                                                 --------->SPL7                                                                               ----------->HVH21                                                                               <---------SPL7                                                                              --------->TOE1(1)                                                                            <-----------HVH21                                                                           --------->TGA1a                                                                           <---------bZIP60(1)                                                                           <---------TGA1a                                                                           --------->TGA2(1)                                                                           --------->bZIP60(1)                                                                           <---------ANAC46                                                                           <---------TGA2(1)                                                                           <---------O2                                                                           --------->O2                                                                           <---------bZIP60(2)                                                                        ----------->HVH21                                                                        ----------->TGA1                                                                        xxxxxxxxxxxxxxxx>smallRNA(s)                                                                      <---------At4g35610            ----------->GT1                                           --------->At4g35610     --------->YAB1                <---------ANAC55(2)                --------->ZAT2     --------->ANAC55(2)     <-------TEIL      <-----------HVH21      <---------ZAT2 ------->AHL20(2)    <---------AHL20(2)    ------->TEIL            ==================bZIP_DOF -------AHL20(2)    --------->AHL20(2)  <---------YAB1             ---------->DOF2<---------DEAR3(1)- ------>AHL20(2) --------->ICU4    --------->ANAC55(2)   <---------ANAC46<---------TGA2(2)        <--   ataattttcgtaatttgtaaaaattaatgggttcaatacttaatgaatgtgtcacatttgtgtatatagcaaagctgacgtcggacgctgctcttgatac  5505800                                                                                                   <-                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                              <------                                                                                 --------->O2--------                                                                             <------NtERF2   --------                                                                            ------>NtERF2    --------                                                                         --------->LBD16     --------         <---------ZAT18                                     ------>NtERF2<---------MYB52(1) --------  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           --------->At4g35610   <---------LBD16     <---------ZAT2 -------->LBD16     <---------MYB52(1)           <-------GAMYB     <---------ARR11(3)      --------->ZAT2 -------LBD16   <---------LBD16                 <---------MYB46(3) --------->ARR11(3) ------->TEIL <-   accgggactagtggccatcgcggtttgtcatggttttgctctcttcgtggccgttgcaatcggagccaacatctccggtggccatgtgaacccagccgtc  5505900  Previous    Next  AGI:  At3g16240.1    Description:  DELTA-TIP (delta tonoplast integral protein); water channel. Identical to Aquaporin TIP2-1 (TIP2-1) [Arabidopsis Thaliana] (GB:Q41951;GB:Q0WM76;GB:Q42200;GB:Q42201;GB:Q43352;GB:Q8VZ81); similar to DELTA-TIP2/TIP2,2 (tonoplast intrinsic protein 2,2), water channel [Arabidopsis thaliana] (TAIR:AT4G17340.1); similar to delta-VM23 [Raphanus sativus] (GB:BAA31452.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 5505410    to: 5507056    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version