Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       ----------->GT1    --------->DAG2    <-----------------------TaNAC69(2)   <---------ZAT14   --------->ZAT14                                                                            -------   ---------->DOF2                                             <---------YAB1       --------->MYB52(1) ---------->GT1        <---------AHL20(2)                <---------ARR11(3)       <---------MYB59 ->AHL20(2)           --------->AHL20(2)         --------->ANAC58    ------>ZmHOX2a(1)        ------- --AHL20(2) --------->DAG2                       --------->ANAC58   --------->TOE2(3)   --------->At5g28300 >AHL20(2) ---------->DOF2            <-----------GT1   <---------GLK1(2)        --------->ANAC55(2)   aatagtaaagtgaaaaagttcaaattttatgttttttttttttctaaatgtaagcacagcatcttataatcctaaatttgtttacataactgtaaatgat  5465900                                           --------->GLK1(2)                                   --------->MYB59                                   --------->MYB111(2)                                   --------->MYB46(2)                                   --------->MYB52(2)                                   --------->MYB111(1)                                 <---------MYB52(1)                                ------------>MYB.PH3(2)                               <---------MYB46(3)                               --------->MYB52(2)                               --------->MYB46(2)                               --------->MYB111(1)                   <----------ID1                 -       <------ZmHOX2a(1)     <--------P  <------ZmHOX2a(1)     <------ZmHOX2a(1)               ------ -->YAB1                     <---------MYB52(1)               ----------->GT1               --------- ---->GT1          ----------->RAV1(1) --------->MYB59  ---------->DOF2  ---------->DOF2  -----------   aaaaatcgaggaaagtttggacaacaaatcggttagttagttaggaatctaatgaggcaaaaggaggaaaaaaaacaaagcatcaaacagaagtcaatct  5466000                                           <-----------GT1                                         --------->YAB1     <---------ANAC58                                        <---------YAB1      <---------ANAC58                                      <---------ICU4    <---------ANAC58              <---------GLK1(1)      <---------YAB1     <---------ANAC58         <---------LBD16        <---------ZAT6  <---------ALFIN1 --------->DAG2        --------->ZAT14--------->YAB1 --------->ARR14(2) --------->DOF2     <----------DOF2  --------->ICU4  <---------ARR14(2) --->TOE2(3) --------->ARR14(2) ----------->GT1 --------->MYB52(1)                              <---- >WOX13(1)   <---------ARR14(2)>>>>>>>>>TAC1 --------->ANAC46                      <-----------GT1 ->CBF --------->GLK1(2)      <---------ANAC46--------->AtMYB61       <-----------GT1--------->TOE2(3)   caaaaagctattctggatttgcctttgcagtcgagtgttattattataccacacggtttcgttcttgtgttttaacaagtttttttttcttaattcttct  5466100                                                <---------ICU4                          <------ZmHOX2a(1)      --------->ANAC46                ---------->ID1        --------->LBD16            ----------->GT1   <-------TEIL          <-----------GT1     --------->YAB1 ------>NtERF2  <----------DOF2 ------DOF2          <---------MYB52(1)   <----------DOF2 <---------LBD16------>ZmHOX2a(1)   ttacatacacatcaaacaactctgttttttctcttgttttgtttctttcattatgtctctcccgcctaaaaactcctctttgtttcaagaggagaaaaca  5466200                                                                                         <---------RAP2.6(3)                                                                                        --------->RAP2.6(2)                                                                                     --------->ANAC58                                       --------->ARR11(3)                            --------->ANAC58                                  <---------TOE2(3)                           --------->DAG2                         ------>ZmHOX2a(1)            ---------->DOF2        ---------->DOF2    <-------TEIL        --------->TOE2(3)         ----------->GT1 ---------->DOF2    --------->ANAC46   gagagattcaaaaacagagaacctctccttagatttaagaaaatcatggaaatggtgaaagcgagtgagaaagaacatgaaaagtacaagccgaaattgt  5466300                                                                                                 <---                                                                                                 ----                                                             --------->ARR14(2)               <------                                                             <---------ARR14(2)              <-------                                                             --------->GLK1(2)              ---------                                                            <---------ARR14(2)    --------->CCA1(2)                                   --------->ANAC46         --------->ARR14(2)    <------ZmHOX2a(2)                       --------->ARR11(3)                   <---------GLK1(2)    --------->ARR11(3)                       <---------ARR11(3)                  <---------At4g35610   --------->ARR14(2)                    >>>>>>>>>TBF1  --------->ANAC58        --------->At4g35610   <---------ARR11(3)                 >>>>>>>>>TBF1     --------->ANAC58   <---------GLK1(1)          --------->AGP1<-----         ------------------------>ANAC81        --------->CCA1(2)------>NtERF2   <---------ARR14(2)--   tcgatttagagaacgtgaagaagaagaactcatcttcaaggcatttcaagagatggaactcagattccgccttgagaattgaagatccagacattgatga  5466400                                                                                       --------->MYB52(1)                                                                                    --------->ANAC58                                                                                    --------->ANAC58                                                                                 ----------->HVH21                                                                               --------->O2                                                                               <---------O2                                                                              --------->LBD16                                                                              ------>NtERF2                                                                           --------->ZAT2                                                                           <---------ZAT2                                                                           --------->At4g35610 ------bZIP60(1)                                                           <---------At4g35610 ----->bZIP60(1)                                                         ---------->CDC5 ---YAB1                --------->AtMYB61         --------->ARR14(2)     <-----------RAV1(2) --TOE2(3)            ------>NtERF2               <---------ARR14(2)   --------->TOE2(3) >YAB1               ------>NtERF2            <-----------------AGL1   --------->AtMYB61<---------At4g35610 ----ICU4            <---------ALFIN1        --------->MYB52(1)        --------->TOE1(3)--------->At4g35610 ------->ZAT18     --------->LBD16          <-----------GT1          -------->P<---------ANAC46   tggcactgttttcaagaaaaccgcgacctccagcatccagccaattctaccggttctggctatggatgagcaacctcagccgcgtgaagcaactgatgaa  5466500                              --------->TOE2(3)                             <---------ICU4                             --------->ATHB12               --------->ANAC58                                  --------->ICU4               --------->ANAC58                              <---------YAB1               --------->ANAC46                       <---------AHL20(2)                       ------             <-----------RAV1(2)       --------->AtLEC2   <---------AHL20(2)        <---------ANAC58            <-------TEIL     --------->YAB1          <---------YAB1       <---------YAB1       ------           --------->CCA1(2)<---------ATHB12     --------->TOE2(3)       --------->AHL20(2)    ------           --------->GLK1(2)--------->ICU4       --------->TOE1(3) ----------->GT1  <---------ANAC46      ---------->DOF2     --------->GLK1(1)   <-----------GT1<---------WOX13(1)     <---------ANAC58-   gaatcacagaaagattcaggcaagagagaaatcattagtccatgcttaaaaccttattatttgattaatgagtaatattataggtttcttgggatgcaag  5466600                                        <---------At4g35610                                        --------->At4g35610                                        <---------ZAT2          <---------ICU4            <------NtERF2                                                 ---         --------->ICU4          <-----------HVH21                                             <-----     --------->At5g28300         <---------PCF2                                                <-----    ----------->GT1            <---------MYB46(3)                                             <------ ----------->RAV1(1)        --------->TGA1a                                           --------->AHL20(2) --->ANAC46 <---------YAB1  <---------TGA1a                                           --------->ATHB12 --->ANAC58--------->AHL20(2)<-------PIF5                                             --------->ATHB51 --->ANAC58--------->AHL20(1)------->PIF5    --------->ZAT6 --------->YAB1            <---------AHL20(2) -------->REM1(1)          <-------TEIL --------->ZAT2     <-------TEIL           <---------AHL20(2)   ctacaacagtaaatattataggtttgaggctcgtgggtcgcgagctaacacaaatgagagattcataagagtcgctcatgttattgaattatttgttcag  5466700                                                              <---------ZAT2                                                             --------->ANAC58                                                       <---------ANAC58           --------->YAB1                              <---------ANAC58          <---------YAB1                           --------->LBD16          --------->ICU4                           <---------LBD16    <---------TOE2(2)                             <---------ANAC55(1)    <---------TOE1(2)                             <---------ANAC46     ----------->GT1   ------>ZmHOX2a(1)                              <---------ANAC58     <---------ZAT6 ------>GLK1(1)                                   <---------ANAC58   <---------ANAC46 ----TOE2(3)                                   <---------ARR14(2)    <---------ANAC58               < ----TOE1(3)                                   --------->GLK1(2)     <---------ANAC58        <------- -----RAV1(2) --------->YAB1          --------->ARR11(3)     --------->ANAC58           <-----------GT1   gtttcctaggttataatgagaaattcactagagaccaagttatcttgagattccgtggattgcaagctaagtcgtgttattttgcatatgttacagaatt  5466800  Previous    Next  AGI:  At3g16130.1    Description:  ATROPGEF13/ROPGEF13 (KINASE PARTNER PROTEIN-LIKE); Rho guanyl-nucleotide exchange factor/. similar to ATROPGEF12/MEE64/ROPGEF12 (MATERNAL EFFECT EMBRYO ARREST 64), Rho guanyl-nucleotide exchange factor/ [Arabidopsis thaliana] (TAIR:AT1G79860.1); similar to pollen-specific kinase partner protein [Lycopersicon esculentum] (GB:AAW57535.1); contains InterPro domain Protein of unknown function DUF315, plant (InterPro:IPR005512) Range:  from: 5466252    to: 5468780    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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