Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------ANAC58                                                  <-------TEIL                           ------------>CBF      --------->ARR14(1)                          --------->TOE2(3)      --------->CCA1(2)               ----------->GT1                         --------->REM1(1)      <---------ARR14(2)             <------------CBF                    --------->ANAC58            --------->ARR11(1)            ------>MYB83          <                    --------->ANAC58            --------->ARR14(2)            ------>MYB46(1) <------                    --------->ANAC46            <---------GLK1(2)   --------->AHL20(2)        -------     --------->ALFIN1  ----------->RAV1(1)<---------AtLEC2<---------ANAC58  <---------MYB59  -------- --------CBF    <-----------GT1          <-------TEIL <----------DOF2    <-----------GT1     <------- ---YAB1       <---------YAB1   --------->YAB1----------->ARR10     <---------AHL20(2)      ---------   ttgaagggtatgggcttattactagcaacatcaatgacaaatgtgcatgagattcgctttgtgtgccaaattatataaccaaattgtaagaaaacattat  5464400      <---------YAB1                                                                              <--    --------->YAB1                                                                               <---   --------->ICU4                                                                                <---   ----------->GT1                                                               <------MYB83<------MYB46(1) ------ZmHOX2a(1)                                                                <------MYB46(1)<---- ---ICU4                                                                        --------->ALFIN1----- -->ATHB12                 ------>ZmHOX2a(1)                                   <--------P    <------MYB83 ->ICU4               <------MYB83                         <XXXXXXXXXXXXXXXXXXXXMIR407      <-------- --YAB1<---------ICU4 <------MYB46(1)         <---------YAB1                   --------->ALFIN1<----- >TOE2(3)         <-----------RAV1(1)---------->DOF2    <---------ATHB12 ---------->DOF2    ---------   taggaatgataatttcatttttgttggtcctagttgctataaagtattcttatttcaaatcaaaaatgtatgacttaaagggttgggccttagtttggtc  5464500           <---------MYB52(2) ----NtERF2--------->MYB46(3)                                            <---------GLK1(2) ------DEAR3(2)                                                       --------->YAB1 ------ATERF1(1) --------->ANAC46                               <---------------AGL15 -----DEAR3(1)   --------->ANAC58                              ----------------->AGL2 ---->ETT(1)------->GAMYB                              <---------HSFB2a(2) -AtMYB61----------->RAV1(1)--------->ANAC58 <-------MYC3  --------->GLK1(1) ----ORA47(1)    --------->ANAC58     <---------YAB1   --------->HSFB2a(2)--------->GLK1(2)         - >MYB59 <----------ID1      --------->ANAC58 ------->MYC3  <---------GLK1(1)             ------->TEIL   ggcccatttagcaacaaacaagaaacagagacgcattattctgatcacatgcaggtttcagaactcccaaaatcagaatttgatatatatgagcctctcc  5464600                                          <-----------HVH21                                          <-----------TGA1                                         --------->O2                                         --------->TGA1a                                         --------->ANAC55(1)                                         --------->ANAC46                                         --------->bZIP60(2)                                         <---------TGA1a                                         <---------O2                                         --------->ANAC58                                         --------->ANAC58                                       <---------ALFIN1                              --------->ANAC58              --------->YAB1     --------->ALFIN1                                    --------->ANAC58             <---------ATHB12  --------->TGA1a                                    <---------ZAT18           --------->WOX13(1)  <---------ANAC46                     --------->At4g35610         <---------ATHB12      --------->O2                    --------->ZAT14  <---------At4g35610       ------>ZmHOX2a(1)       <---------O2                ------>ZmHOX2a(1)    --------->At4g35610 --------->DOF5.7(2)           <---------bZIP60(2)   <---------ICU4 <---------At4g35610     <-------- <---------MYB52(1)            <---------TGA1a    --------->bZIP60(2)        <---------At4g35610    < -------->TOE2(3)              ====================bZIP_bZIP   <---------ZAT14  --------->ZAT2  <----   atcgttatcctatcaatcagaggtctgaaaacgacgtggacacacgtcagacacatcattcctactactctgatgactcatcagctcaccctattttctt  5464700                                                <---------bZIP60(1)                                           --------->YAB1        --------->YAB1                     <---------ICU4 -AHL20(2)   --------->ICU4          <------ZmHOX2a(2)                     *TSS                     < ---------ZAT18 <---------YAB1      <---------ARR14(2)           ------->TEIL                      -- -------GT1<---------TOE1(2)        --------->ARR14(2)       --------------->AtSPL8          --------   actgctcttatcgtagttatcaaactcacaacatagccgatccatttatgacttcagacttactatgtactctcttcaaaaattgtgaccaaaacaaaag  5464800                                               <---------ARR11(3)                                               --------->ARR11(3)                                               --------->ARR14(2)                               <---------ARR14(3)                               --------->ARR14(3)            --------->YAB1                               <---------GLK1(2)             -------->HAHB4                               --------->ARR11(3)           --------->ICU4                               --------->ARR14(2)      ----------->GT1                             ----------->ARR10 <---------ARR14(2)                         --------->ANAC46     --------->GLK1(1)                        ---------->DOF2    --------->CCA1(2)    --------->ANAC58     <---------GLK1(1)                   <------ZmHOX2a(1)  --------->YAB1         --------->ANAC58     --------->RVE1(1)         ------>ZmHOX2a(1) ---------TOE2(3)     <---------KAN4(2)      <---------ARR11(3)        --------->TOE1(3)          --- -------->DOF2       --------->YAB1          --------->ARR11(3)<-----------GT1 <---------LBD16   <--- -->DOF2          >>>>>>>>>TBF1<---------ARR11(3)   <---------AtLEC2   --------->TOE2(3) ----------->GT1   ttaaagataagaagaacgaagaagaataagcaagattttcttatctagatatctgcaaggtaataatacagttccttaaactcaggaagaaaagagaaaa  5464900                                                      <-------TEIL                                                    <---------SPL7                                                   <---------ANAC58                                                   <---------ANAC58                     --------->GLK1(2)             <---------ANAC55(2)                    <---------ARR14(2)             <---------ANAC46                    --------->ARR14(2)            --------------->AtSPL8                    <---------GLK1(2)             --------------->AtSPL3               --------->ALFIN1                  <---------TGA2(2)              <-------MYC3                      ----------->HVH21           ------>ZmHOX2a(1) -------->RAV1(1) ----------->ARR10           --------->ANAC55(2)  <-----------GT1 -------ID1   ------->MYC3                    <---------ANAC55(2) <-----------GT1    --------->ARR11(3)   cgacagaggcagaacatgtggagattctctccctaaaacctgtccaaaacgtgacgtacaattcatttttatcttctccttacgagttatcttctctatt  5465000                                     --------->ARR11(3)                                     <---------ARR11(3)                                         -----                                 ---------->DOF2           --------->ALFIN1            <-------TEIL   --------->AHL20(2)       ----------->GT1             <---------AtMYB61   <---------ANAC58    -----   <---------AHL20(2)   <----------DOF2          ---------->DOF2            <---------ANAC58    -----   tttgttttaatatagaaattttgagtctttgagtaaaaagatgttggaagggaaagcgaaggtggaagagacagacatgcctgtgaagatgcaaatgcaa  5465100          <---------ANAC58          <---------ANAC58    <---------YAB1  --------->YAB1 --------->ICU4                        <----------DOF2      <---------At4g35610                ------ <---------ATHB12           <----------DOF2                 <---------ZAT2    --------->MYB52(2)  <-- ---->ANAC58               ------>ZmHOX2a(2)                --------->At4g35610            <---------ANAC46 ---->ANAC46             <---------ARR11(3)                 --------->ZAT2  <--------P     <---------ANAC58 ---->ANAC58             --------->ARR11(3)      <---------CCA1(2)        ----------->GT1  <---------ANAC58   gcaatgaagattgcttctcaatctctcgatctttttgatgtctttgattctatatccatcgctgctcacatcaagaaggttagtagtcttgtttcttgtt  5465200                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                 <---                                                                                            =========                                                                                            <--------                                                                     --------->CCA1(2)      <--------                                                                    --------->ARR11(1)      ---------                                                                    --------->ARR14(2)      <--------                              <---------ZAT6                        <---------ARR14(2)      <--------                            <------MYB46(1)           <------ZmHOX2a(1)                     <--------                      ---------->DOF2<---------AHL20(2)             <---------ARR11(3)      <-------- ---->ID1           <---------AHL20(2)             <-----------RAV1(2)       --------->ALFIN1  <----- --------DOF2 --------->YAB1<------MYB83      --------->AHL20(2)    --------->ARR11(3)    <----------   cttttctagctaaaaatcatatataaaagttggtgttattttttttaaaaaaatcaggagttcgatgagagatatggaagtggatggcaatgtgtcgtgg  5465300  Previous    Next  AGI:  At3g16117.1    Description:  unknown protein Range:  from: 5464549    to: 5464716    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g16120.1    Description:  dynein light chain, putative. similar to dynein light chain type 1 family protein [Arabidopsis thaliana] (TAIR:AT1G52250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45886.1); contains InterPro domain Dynein light chain, type 1 and 2; (InterPro:IPR001372) Range:  from: 5464775    to: 5465537    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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