Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <-----------GT1           --------->AHL20(2)                                 <---------AHL20(2)             --------           <---------AHL20(2)                     <------MYB83--------->AHL20(2)            <--------          --------->AHL20(1)                      <------MYB46(1)                         <---------ICU4          <---------AHL20(1)                      ----------->GT1                         --------->YAB1          --------->AHL20(2)             <---------AHL20(2)--------->ARR11(3)            --------->ICU4          <---------AHL20(2)--------->AHL20(2)   --------->MYB46(2)        <----------DOF2<--------HAHB4      <---------AHL20(2) <----------DOF2 --------->AHL20(2)<---------ARR11(3)   <---------YAB1     --------->AHL20(2)  --------->TOE2(3)       <---------MYB46(3)  <---------TOE2(3)   <---------YAB1   aaaactattaaataaaattagtttttactttaaaatagaccaaaaaattgtttggtgataagatttatattaagaaacttttattaataccatcattata  5454400                              <---------ICU4                           <---------ICU4                           --------->YAB1                        <---------ICU4                        --------->YAB1                       --------->ICU4                       <---------YAB1                     <---------ICU4                     --------->YAB1                    <---------YAB1                    --------->ICU4                  <---------ICU4                  --------->YAB1                 --------->ICU4                                  <---------ANAC46               --------->YAB1 --------->YAB1                     <---------ANAC58              <---------YAB1 --------->ICU4                      <---------ANAC58   --------->DAG2<---------YAB1  --------->YAB1              ------->MYC3 ->YAB1     --------->YAB1--------->ICU4<---------At4g35610  <-------MYC3                           < -YAB1     <---------YAB1 <---------YAB1--------->At4g35610 <---------O2                            -   aacaaaaattgatatgataataataataataataatcaaaactgctgaaaataggttgcaaaacgtggcttatatataaaacagttcccaaattgaatcg  5454500                                              <------MYB83                                              <------MYB46(1)                                           --------->CCA1(2)                                           --------->ARR14(1)                                          --------->ARR11(1)                                          <---------ARR14(2)                                          --------->ARR11(3)              <---------YAB1              --------->ARR14(2)             <---------AHL20(1)           <---------ARR11(3)        <---------AHL20(2)             <---------AHL20(2)        --------------->AGL15       --------->AHL20(2)           <---------YAB1        --------->ANAC46                 <---------YAB1        <---------AHL20(2)    <---------ARR14(2)          <---------ICU4                  <---------TOE2(3) <---------AHL20(2)           --------->ARR14(2)       --------->YAB1                  <---------YAB1 ---------AHL20(2)          --------->REM1(2)--------->MYB59   <---------YAB1         --------->TOE2(3) -------->AHL20(2)   ---------->DOF2  <-----------------AGL1 ----------->GT1    --------->AHL20(2)   aatttaatagtttattattttttaaaagtgtgtataccctacaagatttggtatcaataaacattgttattatatgtttcaaaaaaattcttaatgtttc  5454600                                              -------->P                                    <---------TOE2(3)                                    <---------TOE1(3)                                   <---------DOF5.7(2)                                 --------->DOF5.7(2)                                            -----                --------->HSFB2a(2)--------->MYB52(1)                                          ------                <---------HSFB2a(2)<-----------GT1                   <---------AHL20(2)       -------         <-----------GT1 <------NtERF2--------->ATHB12       <-----------HVH21  --------->AHL20(2)  -   aaaaatttgtttaaccttctctaaggccgaagtaagttaacgatttgcaaccaggcccatttatgtcacatataatggcccataaattcacttcaatcct  5454700       --------->ARR11(3)                 ------>ZmHOX2a(2)       <-----------ARR10                 <------ZmHOX2a(2)       --------->GLK1(2)        <---------AHL20(2)       <---------ARR11(3)       <---------AHL20(1)   --------->YAB1               --------->AHL20(1)  --------->AHL20(2)<---------ICU4    <---------YAB1                                        ------->GAMYB ->ZmHOX2a(1)      --------->ICU4   <-----------GT1                                <---------------AtSPL8 --->TOE2(3)     --------->YAB1 --------->AHL20(2)    ----------->RAV1(1)          --------------->AtSPL3 -->YAB1      --------->TOE2(3)--------->AHL20(2)  --------->PCF2  ---------->DOF2 --------------->AtSPL8 -------->YAB1--------->TOE1(3)<---------AHL20(2) <-----------TCP11(1)         <----------DOF2   aaaaataaaaatctaaccttcataatgggcaaaataaattacgatcgtattcaggcccacaaatacaaacaaaggcccatgcttttaagtacaaccctag  5454800                                                                 <---------TOE1(2)                           --------->YAB1                       ------>ZmHOX2a(1)                        *TSS   <---------AHL20(2)           <---------ARR11(1)                      --------->At4g35610                   <---------ARR14(2)  --------->ANAC58                      <---------At4g35610                   --------->ARR14(2)  --------->ANAC58               ----------->TBP--------->AHL20(2)           <---------ARR14(1)   --------->ANAC46    -               --------->AHL20(2)                  ----------->HVH21            --------->ZAT6      <               <---------AHL20(2)     <---------At4g35610  <---------CCA1(2)   --------->ZAT18  -----        --------->TOE2(3)<-----------HVH21  <<<<<<<<<TBF1--------->RAP2.6(2)   <---------ZAT18 <-----   aattagaaaacgttgatataaataagctgtcataaaattgagcttcttcttctctgaagccgtatcctagggttttctttgcacactactcgctccaatg  5454900        ------>ZmHOX2a(1)  ------>ZmHOX2a(2)        <---------WRKY18(1)  ===================HOX2a_HOX2a  =============HOX2a_HOX2a--------->WRKY38(1)         --------->ATHB51                           ---- -------->ARR11(3)       <---------WOX13(1)          <---------YAB1                              ---- ---------ARR11(3) <---------ANAC46               <---------AHL20(2)          <---------AtLEC2   <--- ---->YAB1      <----------DOF2                   --------->ICU4 <---------DAG2                  <--- ----ATHB12   ------>ZmHOX2a(1) --------->AtLEC2  <---------YAB1 <----------DOF2   ---------->DOF2   gtgatctctcctcttcctctttcgtcgattgaccatgaaaaccatctctgatattattattgtggaactttttgagtattgcagggaaagggaacaggga  5455000                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                          ----------------->AGL1          <---------ANAC58                                                        <-----------GT1        <---------ANAC58   <--             <------ZmHOX2a(1)                        --------->HSFC1(2)       <---------ANAC58 <----          <------ZmHOX2a(1)                      <------NtERF2    --------->LBD16         <---------ANAC58 ----->HSFC1(2)                    <-----------HVH21 <---------TOE1(2)    <---------MYB46(3) -------- ----->HSFB2a(1)           <---------ALFIN1    <---------DEAR3(1)--------->HSFB2a(2)<---------ANAC58 ------HSFB2a(1)         <---------ALFIN1  --------->ALFIN1--------------->AGL15    <---------ANAC58 ------HSFC1(2)      <-----------HVH21     <---------AtMYB61     <---------HSFB2a(2)<---------ANAC46   gtttcggtaagaggaggaacaagagtcacacactctgtgtgagatgtggtcgtcgtagtttccacatccagaagagtcgttgctcggcttgtgcttaccc  5455100    --------->ANAC58                                                                          <------    --------->ANAC46                                                                        <-------- --------->ZAT2                                                                          <----------DOF2 --------->At4g35610                                                                    <---------ANAC58 ------>At4g35610                                                                  <---------GLK1(2) -------ZAT2                                                              <---------HSFB2a(2) <------ ------>ZAT2<------ZmHOX2a(1)                                             --------->HSFB2a(2) <------ -------At4g35610              --------->ATHB12               <---------ANAC58     --------->ARR14(2) -------RAV1(2)       --------->ARR11(3)                      <---------ANAC58     <---------ARR14(2) >P --------->ANAC58  <---------ARR11(3)                     <-------TEIL<-----------GT1<---------ANAC58   agctgctcgcaagaggacttgtaagaactctcttcattgttttaaaaaaacattctctgaagatgcgtttcattttctcgatctagatttgcttttgtgt  5455200     <-------TEIL                 --------->GLK1(1) <---------YAB1        <---------ANAC58 ---ANAC58             <---------ANAC58                                                           --- -ANAC46           ------>ZmHOX2a(2)                                                             <--- ---ANAC58       <---------ARR11(3)                                                            ------ ---ANAC46       --------->ARR11(3)    ------->TEIL      --------->KAN4(2)                ------->TEIL   gttaatattcattctccatgatcgtgcttgagtctgatatgcatttggaccaatttgtatattcgttctctaacagaagaagcttatctatgtagctcga  5455300  Previous    Next  AGI:  At3g16080.1    Description:  60S ribosomal protein L37 (RPL37C). Identical to 60S ribosomal protein L37-3 (RPL37C) [Arabidopsis Thaliana] (GB:Q8LEM8); similar to 60S ribosomal protein L37 (RPL37B) [Arabidopsis thaliana] (TAIR:AT1G52300.1); similar to unknown [Populus trichocarpa] (GB:ABK95278.1); similar to unknown [Populus trichocarpa] (GB:ABK93758.1); contains InterPro domain Ribosomal protein L37e; (InterPro:IPR001569); contains InterPro domain Ribosomal protein L37ae/L37e, core; (InterPro:IPR011331); contains InterPro domain Ribosomal protein, zinc-binding; (InterPro:IPR011332) Range:  from: 5454824    to: 5455933    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version