Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                         <------NtERF2                                                                                       <---------ANAC46                                                                                      <---------LBD16                                                                                      <------NtERF2                                                                                      --------->ATERF1(1)                                                                                     <---------ERF1--                                                                                     <---------ORA47(2)                                                                                     <---------RAP2.3(1)                                                                                     --------->LBD16                                                                                     <---------ATERF1(1)                                                                                     ------>NtERF2 --                                                                                    --------->RAP2.3(2)                                                                                    --------->RAP2.3(3)                                                                                    <---------RAP2.3(2)                                                                                    --------->ATERF1(2)                                                           --------->At4g35610      <---------DEAR3(1)                                                           <------ZmHOX2a(2)        --------->DEAR3(1)                                                           <---------At4g35610      <---------ATERF1(2)                          <---------SPL7                  <---------ARR14(2)       <---------LBD16 <-                       --------->LBD16           <------ZmHOX2a(2)                 --------->DEAR3(2)                     ------>ZmHOX2a(2)     ------>NtERF2  <---------AGP1           --------->ORA47(2)                     <---------LBD16       --------->LBD16--------->GLK1(2)        --------->RAP2.3(1)                    <------ZmHOX2a(2)      <------NtERF2  <---------ARR11(3)       --------->ERF1  <-                   --------->ARR14(2)   --------->ABI4(1) --------->ARR14(2)       <------NtERF2 <---                 --------->LBD16        ------>NtERF2     <-----------ARR10        --------->ATERF1(1)               <---------LBD16         --------->DEAR3(1)<---------CCA1(2)         --------->DEAR4(2)           ----------->ARR10--------->SPL7--------->DEAR3(1)------>ZmHOX2a(2)     <---------RAP2.3(1)    <----------DOF2<---------ARR14(2)  --------->ANAC46  <---------ARR14(1)       <---------ATERF1(1) ---------GT1 --------->MYB52(1)    <---------ALFIN1    --------->LBD16       --------->TOE1(2)<-----   ttacctctttgatgagaaccggatccggcatacgacgaacaccgccgcgagatcgaaccggatctgagacgattacagaacatgcgccggcggattcagc  5444900                                                 --------->MYB52(1)                                           --------->ANAC58                                           --------->ANAC58                                       ------>NtERF2                                       <---------ATERF1(1)                                       --------->ABI4(1)                                      --------->DREB2C(2)                                      --------->RRTF1(2)                                      --------->RRTF1(3)                                      --------->ANAC58                                      --------->RAP2.3(3)                                      --------->RAP2.3(2)                                      --------->DEAR3(1)                                      <---------ATERF1(2)                                      --------->RAP2.6(2)                                      --------->ATERF1(2)                                      --------->ANAC58                                      --------->ANAC46                                     --------->RRTF1(1)                                     --------->RAP2.6(1)                                     --------->DEAR4(2)                                     --------->ERF1                                     --------->ORA47(2)                                     --------->RAP2.3(1)                                     --------->ATERF1(1)                                     <------NtERF2                                    <---------ATERF1(1)                                    ------>NtERF2------->TEIL                                    <---------RAP2.6(1)        <------MYB83                <---------RRTF1(1)        <------MYB46(1)             <---------ORA47(2)     <---------ANAC58               <---------RAP2.3(1)     <---------ANAC58               <---------DEAR4(2)    <---------ZAT2                 <---------DEAR3(1)    --------->ZAT2                 <---------RAP2.3(2) ------->At4g35610                 <---------RAP2.3(3)                             <------MYB83 ------->ZAT2         --------->HSFC1(2)  ------>NtERF2           --------->TOE2(3)----------->GT1 --------ZAT2         <---------HSFC1(2)<------NtERF2             --------->TOE1(3)<------MYB46(1) --------At4g35610 <------ZmHOX2a(1)<---------ERF1----------->RAV1(2)--------->MYB52(1)           <-- ------ZAT18--------->MYB52(1)     <---------RRTF1(3)  <---------At4g35610        <---------AtMYB61<- ----At4g35610 ------->GAMYB       <---------RRTF1(2)  --------->At4g35610  --------->MYB52(1)   <---   gagcttagcttggttaaccgaggaaacttcaacaatggcgccgccacgaagtacctgagctaatccgaccttaacagagaacggatggtttttcttcgcg  5445000                                                               --------->LBD16                                                              --------->ANAC58                                                              --------->ANAC46                                                              --------->ANAC58                              <---------At4g35610      <---------ANAC58                          --------->MYB52(1)           <---------ANAC58 --------->MYB59                 <---------ZAT14                <-----------HVH21       <---------TOE2(3)              ------>NtERF2   --------->At4g35610  --------------------->WRI1              <---------At4g35610              --------->ANAC55(2)      <---------TOE1(3)              --------->At4g35610              <---------ANAC55(2) --------->ICU4            <---------RAP2.6(2)         ------>ZmHOX2a(2)    ------>ZmHOX2a(2) -------DEAR3(1)<----------DOF2       --------->ARR11(3)   <---------ARR14(2) --------DEAR3(2)--------->ZAT14      <---------ARR11(3)   --------->ARR14(2)               --------- ---NtERF2--------->ALFIN1<-----------GT1     ------>ZmHOX2a(2)------>NtERF2  <---------ANAC46 ------   tcggtaatggctgtgccgctgtagagagtaacagctccttgatcttgatccgtcatagcttgatccgccatttttaggttctgtgagtttttagtaacag  5445100               --------->MYB52(1)              <---------ARR14(2)                               <-------GAMYB           <------NtERF2              <------ZmHOX2a(2)       <---------ANAC46         --------->DEAR3(1)          <---------ARR11(3)      <-------TEIL   ----------->GT1        <---------LBD16              --------->ARR14(2)   <---------At4g35610  <---------DAG2        <---------MYB46(3)                --------->At4g35610  <----------DOF2   --------->ALFIN1 <---------ARR14(2)   <---------ZAT2   <------ZmHOX2a(1) >MYB52(1)--------->LBD16        --------->ZAT6        ---------->DOF2 --------->ALFIN1 --------------->WRI1<---------MYB46(3)------>ZmHOX2a(2)  --------->ZAT2  ----------->GT1 --------->MYB52(1)   agagcttttcgccggagaaacggtgtttgttagtaacacgatctgagacgagaacgagaaagctgcgttgaaggtgaggagaaatatagagagaacggag  5445200                            <---------HSFB2a(1)                            <---------HSFC1(2)                            --------->HSFB2a(1)                       <---------HSFC1(1)                       <---------HSFB2a(2)                                           <---------SPL7                       --------->HSFC1(1)                                           <---------ANAC46                       --------->HSFB2a(2)                                         <------NtERF2                   <------MYB83----------->RAV1(2)                                ------>NtERF2                   <------MYB46(1)                                                <-----------HVH21                  <---------AtMYB61                                              <---------ANAC46                  --------->MYB59                                           --------->MYB52(1)    ---                <---------ANAC46                                    <---------ARR14(2)          -----              <---------MYB46(3)            <-----------HVH21       --------->ARR14(2)         ------             <---------AtMYB61----------------------->TaNAC69(2) --------->ALFIN1<---------DEAR3(1)           --------->ALFIN1 --------->HSFC1(2)                 <---------ANAC46  --------->DEAR3(1)   aagacgaagaagagtgtggtttggtctagaaacttctgagactgttcgtcactgagaaatggttagggtggaatcgcaaaacggcgtcgtatgcagaaaa  5445300                                                                                                    <                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                             ------->MYC3                                                                                             <-------MYC2                                                                                             ------->PIF5                                                                                             ------->MYC4                                                                                             ------->MYC2                                                                                             <-------MYC3                                                                                             <-------PIF5                                                                                             --------                           <---------WOX13(1)                                                <-------MYC4                         --------->ATHB12                                                   ---------                      --------->YAB1                                                        ---------                     --------->ICU4                                                         ---------                     <---------YAB1                        <---------YAB1                   <--------         --------->ZAT18<---------YAB1                 ==============================================         <---------ZAT18--------->ICU4                 <----------DOF2                      <-------- -------->GT1      <---------ICU4                <---------DAG2             <---------MYB46(3)------- ---->DAG2         --------->YAB1                <----------DOF2          <---------MYB52(1)<-------- ---->DOF2        --------->ICU4   *TSS    --------------->AtSPL3       <---------MYB46(3)  ---------   aggaaactaagtgggcttccatgatgatgattgatgacccaagtagacggactttttctttatttttgtaagagccgttggatgtgaatagaacacgtgg  5445400 ---------ARR14(2) ------ANAC58 ------ANAC55(2) ------ANAC46 ------bZIP60(1) ----->bZIP60(1) ----->ANAC55(2) ------ANAC58 --NtERF2 >ABF1                                                                                         ------ >ANAC55(2)                                          =================bZIP_DOF                ------- >TGA1a                                        <---------WOX13(1)                       --------->ANAC46 >ANAC46                                    <---------YAB1                              --------->ANAC58 -ANAC55(2)                           <---------WOX13(1)   ---------->DOF2              --------->ANAC55(2) =bZIP_DOF                          -------->HAHB4   <---------O2                       --------->ANAC58 -TGA1a                             --------->ATHB12 <---------TGA1a               <---------ICU4 -->ALFIN1                         <---------ATHB12  =================bZIP_DOF    --------->ICU4 -O2                               <---------YAB1    --------->TGA1a              --------->AHL20(2) >O2 <---------ANAC46              --------->ICU4    --------->O2      ---------->DOF2<-----------GT1   cgtaatcgtgtgtaattctcgtccaaagtattttgaaatgattgttttgatggacacgagtcaaagaagaaaacaaagcatgaaatatttacgaaataaa  5445500                                                                                                    <                                                                                                 <---                                                                                                 <---                                                       --------->bZIP60(1)                <-------MYC3                                                       --------->ANAC46                   ------->MYC3                                                       --------->TGA1a                    <-------MYC2                                                       --------->bZIP60(2)                ------->MYC2       --------->REM1(1)                               <---------bZIP60(1)               <---------ANAC46      <-------TEIL                                     <---------TGA1a                   --------->TGA1a   ----------->GT1                                     <---------O2                      <---------TGA1a  --------->ALFIN1                                     --------->ANAC58                  <---------O2  --------------->AtSPL3           <---------ALFIN1    --------->ANAC58                  --------->O2  <---------ZAT6  ------->GAMYB  --------->PCF5        --------->O2 <---------O2         <---------ANAC55(2)  <---------------AtSPL8         --------->TCP15(2)  <-----------GT1<---------bZIP60(1)  --------->ANAC55(2)  --------------->AtSPL8        <---------PCF5<---------AHL20(2)    --------->O2         ============  <---------------AtSPL3       <-----------TCP11(1)<-----------HVH21--------->bZIP60(1)  ============ --->DAG2         ===============================================MYC_MYB              ------>ZmHOX2a(1) --->DOF2     --------->MYB46(3)--------->PCF2--------->AHL20(2) --------->ANAC46<---------ZAT18<----   gggagtggtacatctaacaactgtcttacttagtggcccaccatgttataaattgtcacgacactagacgacgtcgtttgtagtgctcctcacgtgtttc  5445600                                                   --------->ANAC58                                                   <---------ANAC55(2)                                                   --------->ANAC58                                                   ----------->GT1                                                   --------->ANAC55(2)                                              <---------------AtSPL8                                              <---------------AtSPL3     <------MYB83                         -------->HAHB4     <------MYB46(1)                      --------->ATHB12     <---------MYB46(3)                   <--------ATHB1  <-------GAMYB                           --------->ATHB51 --------->MYB55(2)                       <---------ICU4 --------->MYB111(1)                     --------->AHL20(2) <---------MYB46(3)                      <---------ATHB51 --------->MYB111(2)                  <---------AHL20(2)                 ------->GAMYB --------P                           <---------AHL20(2) <---------ARR11(3) ------TOE1(3)                    --------->WOX13(1)    --------->ARR11(3)<-----------HVH21        -- ------TOE2(3)                 --------->ANAC58<---------ANAC58         <------------AtMYB77   <----- ========MYC_MYB               --------->ANAC58<---------ANAC58        --------->ZAT2    <------ZmHOX2a(1) =========MYC_MYB    <---------At5g28300 <---------AHL20(2) <-----------GT1 --------->ZAT6 ---------- -------RAV1(2)     <-----------GT1  --------->AHL20(2)<---------CCA1(2)<<<<<<<<<TAC1  <---------TOE2(3)   aggttgttggttctatacatttttacagttttgaagcaattaaataattgagtacgtaaatcttactcttcccaactgtcactaccactgaggatgttta  5445700                                   <---------YAB1                                  <---------AHL20(2)                                            <----     --------->DAG2               <---------AHL20(1)                                     <----------DOF2    ---------->DOF2    --------->ATHB12                                               <---------ARR11(3) ------->YAB1         <---------YAB1        <----------ID1          ---------->DOF2   --------->ARR11(3) ----AHL20(2) ------->TEIL        --------->AHL20(1)             --------->AHL20(2)--------->DAG2   < ->GT1       <---------CCA1(2)    --------->AHL20(2)       <------NtERF2          ---------->DOF2   <   atcatataaagttctgaatcttgtatgatttgatattatattagatgagacaaaatcagtcggcaaaataaaaagatggaagaaaaaagttcttttttaa  5445800  Previous    Next  AGI:  At3g16050.1    Description:  A37 (PYRIDOXINE BIOSYNTHESIS 1.2); protein heterodimerization. Identical to Probable pyridoxal biosynthesis protein PDX1.2 (PDX12) [Arabidopsis Thaliana] (GB:Q9ZNR6;GB:Q0WS48); similar to PDX1 (PYRIDOXINE BIOSYNTHESIS 1.3), protein heterodimerization/ protein homodimerization [Arabidopsis thaliana] (TAIR:AT5G01410.1); similar to pyridoxine biosynthesis protein [Lotus corniculatus var. japonicus] (GB:AAZ67141.1); contains InterPro domain Ribulose-phosphate binding barrel; (InterPro:IPR011060); contains InterPro domain Vitamin B6 biosynthesis protein (InterPro:IPR001852) Range:  from: 5443956    to: 5445335    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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