Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         ---------->DOF2  ----------->RAV1(1) ------>ZAT18 -------ZAT14 ---------->AtSPL8 -----------AtSPL8 ----ANAC58                                                                                     <---- ----ANAC58                                                                                   <------ ----ANAC46                                       --------->CCA1(2)                           ------- --ANAC46                                <---------ANAC46                     <----------DOF2 <------ -MYB52(1)                   <---------YAB1      <---------ARR11(3)   ------->GAMYB  ---------->DOF2 -RAV1(1)   --------->DEAR3(1)        <---------MYB52(1) --------->ALFIN1 <----------DOF2     -------   tgtacaacaaaacgcagacgatagaccaagtatgttagacgttgtgtccatgatatacggtgatggaaacaacgctctttctttgcctaaagagccagct  5442700                         --------->DEAR3(1)                   --------->ZAT2                   --------->At4g35610              <---------HSFB2a(2)              --------->LBD16                  --------->LBD16   --------->YAB1 --------->GLK1(2)          <------NtERF2  <---------YAB1---------->DOF2              <---------LBD16 ------DOF2 --------->LBD16<------NtERF2    --------->MYB52(1) ---At4g35610 --------->HSFB2a(2)           ------>NtERF2                 ----------->GT1      ------ -->At4g35610--------->LBD16               --------->DEAR3(1) ------->TEIL<---------ZAT6       ------ ---ZAT2   <---------LBD16--------->LBD16  <---------ALFIN1   <---------ARR14(2)    <---------At5g28300 -->ZAT2--------->PCF5  <---------LBD16   --------->MYB46(3)  --------->ARR14(2)   --------->YAB1   ttctatgatggtcccccgagaagctcgccggagatggaagttgagccaccggagatggaaaatgtatcggcaaatagagttacaatcacagtgatggaag  5442800                                                  <---------WOX13(1)                                             --------->YAB1                                             -------->HAHB4                                            --------->ICU4                                          --------->YAB1                                          <---------ICU4                                         --------->ICU4------>ZmHOX2a(2)                               --------->YAB1<---------ICU4        <---------YAB1        <-----------GT1 --->ANAC58                  <---------WOX13(1)<---------YAB1   ------->TEIL       <---------TOE2(3) --->ANAC58                --------->ATHB12 <---------YAB1<---------TOE1(2)       <-----------GT1   caagatgagctactgaatttgaagaaaactgattgataatggaataatgatgactgatcgtatgtgaatctcattgtttactataaacgttttacttcta  5442900                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    -                 <---------YAB1                                                                     <               <---------ICU4                                                                      <-               --------->YAB1                                                                      --              --------->ICU4         ---------->DOF2                                               ==              <---------YAB1       <-------TEIL                                                    <-            <---------ICU4        --------->CCA1(2)                      ------->TEIL              <-           --------->ICU4------>ZmHOX2a(2)                            <---------YAB1               --    <---------ICU4  <---------WOX13(1)                    <-----------HVH21                    <-----   gttggataatggcattatgatgactgatcgtataagattcaaagtatcgttttctcgttctgtcactcgcttatgaatttgaatacaaaattagacattt  5443000                              --------->TOE1(2)                  <---------AHL20(2)                              <---------LBD16                  <---------AHL20(2)         <---------GLK1(2)   ------>ZmHOX2a(2)                 ----------->TBP       --------->ICU4    ----------->HVH21                     --------->AHL20(2)       <---------YAB1 <------NtERF2                          --------->AHL20(2) ------>PIF5        <----------CDC5                          ----------->TBP -------PIF5        <------NtERF2                            <---------AHL20(2) -------MYC2       ------>NtERF2                           ----------->TBP ------>MYC3       <---------LBD16                         <---------AHL20(2) ------>MYC2      <---------ANAC58                         --------->AHL20(2) -------MYC3      <---------ANAC58                     ----------->TBP --------ANAC46   <---------ANAC46       --------->ANAC58<---------AHL20(2) ------->TGA1a <---------DEAR3(1)        --------->ANAC58--------->AHL20(2)                      *TSS ==============================MYC_MYB   --------->ANAC46----------->TBP                     -------- --------O2    --------->ALFIN1<---------ANAC46      ----------->TBP  --------->YAB1    --------->AHL20(2) --------TGA1a ----------->HVH21    --------->ARR14(2) --------->AHL20(2)  --------->ANAC46  <------- ------->O2    <-----------RAV1(1)  <---------ARR14(2) <---------AHL20(2)  --------->ANAC58 --------- ------HVH21 <-----------RAV1(1)--------->LBD16    --------------->AGL15   --------->ANAC58 ---------   cacgtggacatgattctgtggcgcggagtgatcgcgcgaattcacgcctactactatatatatatatatatatgatcacgcagaacagaatcaaatatct  5443100                                                 --------->ANAC58 ->ARR11(3)                                      --------->ANAC58                         --------->TOE1(3) --ARR11(3)          ------>ZmHOX2a(1)         <------ZmHOX2a(1)                          --------->TOE2(3) >RVE1(1)        --------->ARR14(2)          <---------TOE2(3)                           --------->ZAT6 >CCA1(1)        <---------ARR14(2)          <---------TOE1(3)               --------->AGP1   gaaactcgaagaaacagaggttcctcttgtgtttttgttttgggattaaggaagctatttctgttctcttcgagtttcaggtctagccctaaccctaaaa  5443200                                                                                              <------                             <-----------GT1                                                 <-------                          <---------AHL20(2)                                                 <-------                        <---------YAB1                                                   <---------ANAC58                        --------->ICU4                                                   <---------ANAC58                   ----------->GT1                                             ------>ZmHOX2a(2)              --------->ANAC58                      --------->ARR11(3)        <---------At4g35610              --------->ANAC58                    <---------MYB52(1) <---------ATHB12  --------->ARR11(3)              --------->AtLEC2              <---------CCA1(2)      --------->WOX13(1)  <---------ARR11(3)              --------->ANAC46         ------>ZmHOX2a(1)         <---------ATHB12     <---------CCA1(2)   ttcagccatgtcttccaagcaaggttattattttccttctcctctcatctctgttatcttggttcgaatcaatcgttttgatctgtctatatcttgcttt  5443300                                                                                 <---------ZAT14                                                                     <---------YAB1         ------->TEIL                                                                  <---------AHL20(2)     --------->ANAC58                                                                  --------->AHL20(2)     --------->ANAC58                           --------->AHL20(2)                    <---------WOX13(1)      --------->ANAC46                   <---------ANAC58                         --------->At4g35610  --------->ZAT18                   <---------ANAC58                         <---------At4g35610  <---------ZAT18                ------->MYC2                                --------->ZAT2     <---------ZAT18                <-------MYC2         ------>ZmHOX2a(2)      <---------ZAT2     --------->ZAT18 ----DOF2       <-------MYC3       --------->ARR11(3)     <-----------RAV1(2) <---------ANAC58 --ANAC58       ------->MYC4       <---------ARR11(3)    <------ZmHOX2a(2)    <---------ANAC58 --ANAC58       ------->MYC3<---------AHL20(2)          <-----------HVH21     <---------ANAC46-------   cacatttttgtgtttacatgtgcttgctattttatatgatctcatgaattcatcgatcgatcagctgatttattaatcttgtgtgctcttaacgcatcga  5443400                                      --------->HSFB2a(2)                                   ------>ZmHOX2a(1)                            ----------->GT1     <                                  <---------ANAC58                            <------ZmHOX2a(1)     -       ------->TEIL               <---------ANAC58                         <---------LBD16       ----       -------->P       --------->AHL20(2)                                 <-----------RAV1(2)   ==== <-------TEIL           <---------AHL20(2)    ----------->RAV1(1)    <---------YAB1           <------ ---->GT1   <-----------HVH21     <---------ANAC46             --------->AHL20(2)             =======   aaattcatcaaccttgtcatttgaatttatatggttccttatggaatccaacattttctgcaaaatgaaatatgatttcaggagggaaattgaagccttt  5443500        ================MYC_MYB        --------->TGA1a     ----------------->AGL1     <-----------------AGL1           --------->YAB1   --------->At4g35610               <---------YAB1 ---------At4g35610   <------ZmHOX2a(1) -------->At4g35610   <---------------AtSPL8                         <---------At4g35610 ------>DOF2   <--------P  <---------TOE1(1)                         --------->At4g35610 =================bZIP_DOF <---------TOE2(1)               <----------DOF2 ----DOF2    ----------->GT1    <---------TOE2(3)         <---------DAG2       --------->AHL20(2) =================bZIP_DOF--------->SPL7          ------->TEIL   <----------DOF2         <-----------GT1   gaagcagcccaagtctggtaagaaggagtacgatgaggtatgatagcaattgtacccttgcctttttctttagctcaacgttttaatggttttactctgt  5443600  Previous    Next  AGI:  At3g16030.1    Description:  CES101 (CALLUS EXPRESSION OF RBCS 101); carbohydrate binding / kinase. similar to B120, protein kinase/ sugar binding [Arabidopsis thaliana] (TAIR:AT4G21390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45907.1); contains InterPro domain Apple-like (InterPro:IPR003609); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (In Range:  from: 5439615    to: 5442808    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g16040.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G15270.1); contains InterPro domain Translation machinery associated TMA7 (InterPro:IPR015157) Range:  from: 5443097    to: 5443958    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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