Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     ------>ZmHOX2a(2)                                                  <------ZmHOX2a(2)                                                 --------->ARR14(3)                                                 <---------AGP1                                                 <---------ARR14(3)                                                 <---------ARR14(2)                                                 <---------ARR11(3)                                                 --------->AGP1                                                 <-----------ARR10                                                 --------->ARR14(2)                                                 --------->ARR11(3)                                                <---------CCA1(2)             <---------ANAC46        --------->LBD16<----------DOF2  --------->ANAC58                  --------->HSFB2a(2)  --------->ANAC58                  <---------HSFB2a(2)                                           --- ------>ANAC58                     --------->LBD16<---------RVE1(1)   --------->YAB1              --- ------>ANAC58           <----------DOF2        <---------ARR14(1) --------->YAB1      --------->TOE2(3) ->YAB1 <-----------RAV1(1)       ----------->RAV1(1)             <---------YAB1       --------->TOE1(3)   acgcaaacaaatgttgctcatagagagctttaaaacccccagaaaacaccagatcttttcaaaacacgatgatcaaaatccaaattcaacctcaaaaacc  5418100                                                                                                 ----                        --------->ANAC58                                                        <----                        --------->ANAC58               ---------->DOF2                         <-----           --------->ZAT14                      --------->ANAC58       <-----------GT1 <---------ARR14(2)    --------->ANAC46    --------->ANAC46        --------->ANAC58  ----------->GT1      --------->ARR14(2) --->MYB83 <---------ZAT14                   <---------SPL7   <------NtERF2        <---------LBD16 --->MYB46(1)     >>>>>>>>>>GATA-1           --------->ZAT18<---------DEAR3(1)<---------YAB1   ------   aaatgccagacactatactcgatttcacgaaaactacaatctataggcgcacgaacacaaagacggcgatgttaaaccatatgatttcggattccacgat  5418200                                                                             ----------->GT1                                                                           ------>ZmHOX2a(2)                                                                          --------->CCA1(2)          <---------ANAC55(2)                             --------->YAB1  <------ZmHOX2a(2)          --------->ANAC55(2)                           --------->ANAC58 <---------AGP1          --------->ANAC58                              --------->ANAC58 --------->AGP1---------->DOF2          --------->ANAC58                     ------>ZmHOX2a(2)         --------->ARR14(2)          --------->ANAC46                    <------ZmHOX2a(2)          --------->ARR11(3) -->ZmHOX2a(2)                           --------------------->WRI1      <---------ARR14(2) --ZmHOX2a(2)                         <---------ARR11(3)--------->ANAC46 <---------ARR11(3) ----ARR11(3)            <---------At4g35610 --------->ARR11(3)         <---------GLK1(1) --->ARR11(3)            --------->At4g35610 <---------ARR11(3)        ----------->ARR10   ctcacttgaattacgcaaaactactacagatgaaatgcaatatccaagatcgcatcgcaagcaaaattcaattgagatctggagaaaaataaagaatgcg  5418300                                                     --------->ANAC55(2)                                                     --------->TOE1(1)                                                  <------ZmHOX2a(2)                                                 --------->ARR14(2)                                                 --------->ARR11(3)                                                 <---------ARR14(2)                                               <---------DEAR3(2)                                              <---------TOE1(2)                                      ------>ZmHOX2a(2)                                     <------ZmHOX2a(2)                              ------>ZmHOX2a(2)                                     --------->CCA1(2)                             <------ZmHOX2a(2)                                     --------->ARR14(1)                       --------->LBD16                                    <---------ARR14(2)  <---------ARR14(2)   ------->GAMYB                                    <---------ARR11(3)  <-----------ARR10    --------->TOE2(2)                                    --------->ARR14(2)  --------->ARR14(2)   --------->TOE1(2)                                    --------->ARR14(3)  ------->TEIL        --------->DEAR3(2)                                    <---------ARR14(3)  <---------ARR11(1)  <------------AtMYB77                                    --------->AGP1--------->GLK1(1)         --------->MYB46(3)                                    <---------AGP1<---------GLK1(1)    <---------At4g35610                                    <-----------ARR10<---------ANAC55(2)   -------->P                                    --------->ARR11(3) <---------CCA1(2)  --------->MYB52(1)                                  ----------->ARR10------>ZmHOX2a(2)   --------->At4g35610           -------->P        <---------At4g35610 <---------AGP1    --------->ARR14(2)           <----          <-----------GT1 ---------->DOF2   <-----------HVH21      ------->TEIL   <---------ARR14(2)         <---------MYB111(1) --------->At4g35610<---------CCA1(2)  <---------ARR14(2)    ---------->DOF2   agatgcgactacttaccatgtttacagattaagcagaagatctgctcgtcggatctcgtatctcgcttgaatctgctaaccggcgatcggagaaagacgt  5418400                                                      -------->ATHB1                                                     --------->ICU4                                                     <---------YAB1                                                     --------->AHL20(2)                                                     --------->AHL20(1)                          <---------ANAC58           <---------AHL20(2)                          <---------ANAC58     ----------->GT1               <---------ANAC58              --------->At4g35610                                    <               <---------ANAC58            <------NtERF2                                            -           <---------ANAC58              <---------DEAR3(1)                           --------->ANAC58           <---------ANAC58              <---------ANAC46  ---------->DOF2            --------->ANAC46      <---------ANAC46  --------->ARR11(3)--------->LBD16 <---------AHL20(2)   <---------YAB1       <  <-------TEIL<---------ZAT18           <---------LBD16 <---------YAB1      <---------ATHB51--------- -----MYB52(1)--------->ZAT18         --------->ANAC46<---------ICU4  <-----------GT1 --------->ANAC58   taggctcgtcgtagagtgcgttcagagagcttgtattaatacggcggagatgaaaattattaaaagaaaatttcacaaattatgcttcaaggaactgatg  5418500     <-----------GT1                                                                 ---------->ID1 <---------RVE1(1)                                                    <---------AHL20(2) <---------CCA1(1)                       ----------->GT1              <---------ATHB51 <----------DOF2 ---------ARR11(3)                      <------NtERF2                 --------->AHL20(2) -------->ARR11(3)                    <---------DEAR3(1)    --------->DAG2          <-----------GT1 ---------ARR14(2)                ------->TEIL  ----------->GT1 ----------->GT1 <----------DOF2     - >ICU4                         <---------YAB1  *TSS        ---------->DOF2  <----------DOF2       <--   aagatatttacgagagtgccactggttctgtttatgaacgtcgtcgtaaaatgaaaaaaaaaaaagtagtaaataattctttcttttttctttttctgct  5418600                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                               ------                                                                                            <--------                                                                              --------------->AGL15 -                                             --------->ATHB12              <-----------GT1 --------->ANAC58                        <---------YAB1      <---------YAB1             --------->AHL20(2)  --------->ANAC58  ----------->GT1  <------ZmHOX2a(1)      --------->YAB1          <---------ARR11(3)   <------ZmHOX2a(1) --------->DOF2   --------->ICU4         --------->ICU4           --------->ARR11(3)  <----------ID1- -------YAB1 <---------ZAT6    ----------->RAV1(2)     <-------TEIL<---------YAB1--------->REM1(2)---   atgaaagtgaaattagtgtgaggattatttttagcctgaagtatttatgatttaagtttcatcaacaatatcattttatactatgtagaggacaagtcag  5418700                                                        <---------YAB1                          -----                                                     <---------AHL20(2)                         <----       <---------AHL20(2)                         --------->ARR11(3)                       --------->O2      --------->AHL20(2)                          <---------ARR11(3)                       <---------O2      <---------AHL20(2)                          --------->AHL20(1)                       <---------TGA1a ------>CCA1(2)                                   <---------AHL20(2)                   <-----------HVH21 ------ARR14(2)                                   --------->AHL20(2)       <----------DOF2 --------->TGA1a ----->ARR14(2)                                   <---------AHL20(1)       ==========================bZIP_DOF ----->ARR10 ----------->HVH21                   --------->AHL20(2) <---------ANAC58  --------->ANAC58 ---HVH21  ----------->GT1                <---------MYB59           <---------ANAC46  --------->ANAC46 -------->ANAC58               <-----------GT1 --------->AHL20(2)   <---------ANAC58  --------->ANAC58 -------->ANAC58  <-----------RAV1(1)     --------->TOE1(3)     --------->KAN4(2) --------->ANAC46 ------>GLK1(1) <---------bZIP60(2)       --------->TOE2(3)----------->GT1 ==========================   atatgcaattaaatcgtgacatgttgcattttttgacaattcaacctaaaaatatattatgttgaaaattccttgcacttttaaacacaagtcacttgtg  5418800              ------->MYC3              <-------MYC3             --------->O2             <---------TGA1a      --------->YAB1      <---------ICU4                                              <---------AHL20(2)     --------->ICU4                                               --------->ARR11(3) <---------AHL20(1)                                               <---------AHL20(1) <---------TOE2(3) --------->AHL20(1)                                          --------->AHL20(1)      <---------TOE1(3) --------->AHL20(2)                                     <------ZmHOX2a(1)------>NtERF2 <---------AHL20(2)   <---------AHL20(2)      --------->TOE2(3)--------->AHL20(2)   <-----------GT1 ---->ZAT18  --------->ALFIN1 --------->AHL20(2)       ----------->GT1  <---------RAP2.6(2) -----ZAT18  <---------O2 <---------AHL20(2) ----------->GT1 --------->AHL20(2)    <-----------GT1 ======================bZIP_DOF          --------->AHL20(2) --------->YAB1     <----------DOF2      -   caataaaatgatgacatgtggcatttattcaattttttcaaaaaaaaatgttaaacgaggaaaaataatatatggcgacttctttttaacgtttctctaa  5418900                                                                 ------>ZmHOX2a(1) --------->AHL20(2)                                         --------->GLK1(1)                       - --------->AHL20(1)                                         <---------GLK1(1) <---------DOF5.7(2)   < <---------AHL20(2)             ---------->DOF2       --------->ARR14(2)     <---------WRKY12      <- -------->AHL20(2)            <---------YAB1          <---------ARR14(2)   <-----------HVH21      ---   aaaaaaattagtttgtattttgcctctaaaatatgaaagaaaacacaaatgcctcatatacgaattcctatatttcatgtcaacgatttatggtgatgga  5419000  Previous    Next  AGI:  At3g15980.1    Description:  coatomer protein complex, subunit beta 2 (beta prime), putative. Identical to Coatomer subunit beta'-3 [Arabidopsis Thaliana] (GB:Q8L828;GB:Q9LW87); similar to coatomer protein complex, subunit beta 2 (beta prime), putative [Arabidopsis thaliana] (TAIR:AT1G79990.2); similar to coatomer protein complex, subunit beta 2 (beta prime), putative [Arabidopsis thaliana] (TAIR:AT1G52360.1); similar to coatomer protein complex, subunit beta 2 (beta prime), putative [Arabidopsis thaliana] (TAIR:AT1G79990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45935.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59846.1); similar to Range:  from: 5411369    to: 5418547    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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