Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <---------ANAC58                                           ---------->DOF2                                 <---------ANAC46                                         --------->ANAC58             <----------DOF2      <---------ANAC58 ------>At5g28300                 ----------->GT1              <---------ARR11(3)    --------->ATHB12 --ZAT14                        ---------->DOF2                --------->ARR11(3)  <----------DOF2 ->ZAT14     <-----------GT1>>>>>>>>>TBF1--------->ANAC58  ---------->DOF2  ------>ZmHOX2a(2)   agtgactatatcaaataacaaattgcagaagaagaaaagaaacaagaaagagagacagagagaaaggtcttactttgatctactgcttcattgccttgga  5402300                        --------->YAB1                       <---------ATHB12                     ------>MYB83                   ------->GAMYB                                                         <----------DOF2                  --------->MYB46(3)                                     --------->ARR11(3)                 --------->ANAC58                                        --------->AHL20(1)                 --------->ANAC58                           --------->KAN4(1)    --------->ANAC58           --------->ZAT2 <---------YAB1                   <---------YAB1<---------AHL20(1)           --------->At4g35610                            <---------GLK1(2)      --------->ANAC58<---      --------->ZAT6 ------>MYB46(1)                  ---------->DOF2   --------->AHL20(2)  ---------   gagaattgacactagctgcaaccaaatgataattttaagagaattgtgtttcatctaaaagattattcagacaaatatatcgtaagccttactttgatat  5402400               ---------->DOF2             ------>ZmHOX2a(2)                                                                -------            <------ZmHOX2a(2)                                                                 -------           --------->AGP1                    ------>ZmHOX2a(1)               --------->At4g35610           <---------AGP1                   --------->TOE2(3)   <---------ANAC58         <----------DOF2 ----TEIL  --------->ARR11(3)     --------->ARR14(2)            <---------ANAC58   <---------ICU4 >YAB1     <---------ARR11(3)     <---------ARR14(2) ---------->DOF2         <---------At4g35610   tcatgctcaattagatctaaagtactcaaacttccagttccttcatcctaaaaccaaaagtcaaatgcgtttgaatatcagttgatcatttctttatcgt  5402500              --------->ANAC58              --------->ANAC58    --------->AHL20(1)                      --------->ANAC58    <---------AHL20(1)         --------->ZAT14    --------->ARR11(3)         <---------ZAT18  --------->AHL20(1)           --------->ZAT18                          --------->ANAC58  <---------AHL20(1)           <---------ZAT14                          --------->ANAC58 --------->AHL20(2) --------->YAB1   ----------->RAV1(2)                --------->ANAC46 -->YAB1     --------->DAG2  --------------->AtSPL8         <---------ANAC58              --------->LBD16 ---->GT1   ---------->DOF2 <---------ANAC46--------->ANAC58<---------ANAC58    <----------ID1   aaaatatatattggtaaagcaattgtatttttgtgtactacctggcaagaaacttgatagaagcttgagagaacaagacacagagacaaacccagagcta  5402600                                                     <---------ANAC46                                     ====================================HOX2a_HOX2a                                     <------ZmHOX2a(2)      <---------ANAC58                                    <---------ARR11(3)      <---------ANAC58    --------->AHL20(2)                                    --------->ARR11(3)    *TSS  <---------TOE2(3)                                ---------->DOF2    --------->ZAT14            <----------DOF2--------      ---------->ID1         --------->YAB1        <---------ZAT14<------ZmHOX2a(1)        ----------   aaaactttgttcccatggtggaagattgttatcacaaagatcaaaatacactgtgttgtgaagcttgaggaaaaacaagactttaaataaaaccaaagta  5402700                                       <-------MYC2                                       <-------PIF5                                       ------->MYC2                                       ------->PIF5                                       ------->MYC3                                       <-------MYC3                                      --------->TGA1a                           --------->YAB1                           -------->HAHB4                 <---------ARR11(3)                          <---------YAB1                  --------->ARR11(3)                        --------->YAB1<---------TGA1a--------->AHL20(2)                       <---------AHL20(2)          --------->AHL20(2)                       --------->AHL20(2)        <---------YAB1                  <---------AHL20(2)  --------->ANAC55(2) --------->AHL20(1)              ==================================bZIP_DOF ----------->TBP              <----------DOF2         --------->ANAC46 <-----------TBP   <---------ICU4             <---------ANAC46         <---------bZIP60(2)<---------AHL20(2)             <---------ANAC58         <---------O2 <---------AHL20(2)   ------>ZmHOX2a(1)             <---------ANAC58         =================bZIP_DOF        <---------MYB59         <-------MYC3 --------->AHL20(2)    <----------DOF2        ------->MYC2                    <-         ------->MYC3 <---------AHL20(2)   <---------ANAC58        ------->MYC3                    -- <-----------GT1  --------->AHL20(2)  --------->O2 <-----------TBP <-------MYC3           --------->ANAC58 --->GT1<---------O2  <---------AHL20(1)   <---------ANAC46        <-------MYC2           --------->ANAC46 >DOF2  --------->O2  --------->AHL20(1)   <---------ANAC58       --------->ANAC46        --------->ANAC58   aaataactcaacgtggctttttaatttaataatagaattcacgtggcttttatttttatatatattccacgttcctaattacaaagaattcaacgctatt  5402800                                                      --------->YAB1             ---------->ID1                          <---------YAB1       <---------YAB1                                --------->ICU4    <---------AHL20(2)                             <---------ICU4    --------->AHL20(2)                             --------->YAB1   --------->AHL20(2)           ------->TEIL      --------->ICU4   <---------AHL20(2)      <---------ANAC46    --------->AHL20(2) --------->YAB1   ---------->DOF2  - --------AHL20(2) --------->TOE2(3)     --------->ANAC58      <---------ALFIN1 ---------->DOF2      < ------->AHL20(2)--------->ATHB12       --------->ANAC58<---------YAB1  <---------ICU4             --   tttaattttattcttgtcttcattagtttctgtgtatgtgaaacgcctataaattatgattatcccactcttaatcttgccaaaagaaagactaagaaaa  5402900                                              <---------ARR11(3)                                              --------->ARR11(3)               ----------->GT1     --------->ATHB51         --------->ZAT18            --------->DAG2         --------->ATHB12       --------->ARR14(2)           ---------->DOF2        <---------YAB1    --------->YAB1 <---------RVE1(1)         --------->DAG2    <---------CCA1(2) <---------CCA1(1)        ---------->DOF2   <---------ARR11(3) -------->ARR11(3)     <----------ID1       --------->ARR11(3)                       <---------YAB1 ---------ARR11(3)   --------->MYB52(1)     <---------AHL20(1)             --------->GLK1(1)    <---- ------->YAB1----------->GT1----------->GT1 --------->AHL20(1)         ----------->GT1 --------->WOX13(1)   atgatatttttaaaaaagtgaaaaaacgaaaagtttattattgaaatatatctataatggaatccactaatgctggtaaatccaactattaatcagttta  5403000                                                          --------->ANAC46                                <---------YAB1            --------->ANAC58                               --------->TOE2(3)     ------>ZmHOX2a(1)                              <--------HAHB4         <---------YAB1                              --------->ATHB12      --------->TOE2(3)         <---------ZAT18                              <---------ICU4     <-----------GT1      --------->ANAC58                              --------->YAB1<---------AHL20(2)        --------->ANAC46             --                             <---------YAB1 --------->AHL20(1)        --------->ANAC55(2)          <-                             <---------ATHB12   --------->YAB1        --------->ANAC58         <-----          <---------YAB1--------->YAB1  <---------YAB1    --------->ANAC58    --------->ZAT18  ------         --------->AHL20(2)  --------->ICU4 <---------AHL20(1)     <---------WRKY38(1)  <---------At4g35610 -------GT1  <---------YAB1--------->YAB1   --------->AHL20(2)     <---------ZAT18   <----------DOF2-   acttactacaatattatgaaatagaagtataatcattagagtataattaattatcctcataggccatagtccacgtattgtgaactactttgctgatata  5403100                                          <---------MYB52(1)                                     <---------ARR11(1)                               ------>MYB83    ---------->DOF2            ------>MYB46(1)                                          --------->REM1(1)   <---------AHL20(2)        <---------MYB59                                      --------->ZAT18   <---------ATHB51 --------->ZAT6   --------->ARR14(2)                           <---------ZAT18 ------->AHL20(2)  <---------ZAT18   <---------ARR14(2)                          <---------ANAC58 --------AHL20(2)  <---------ZAT14   ------->TEIL                      <---------ARR11(3) ----AHL20(2)    --------->ANAC46   <---------ARR14(1)                 --------->ARR11(3) --->AHL20(2) --------->ZAT18<---------MYB111(1)        --------->AHL20(2)       <---------ANAC58  <- -------->AHL20(2) --------->ZAT14  <---------CCA1(2)   <---------AHL20(2)       <---------ANAC46  --   aataaataatgcgatgttcactacactactaccaaatcgtatctgttagacttggtatttatttatactataagataatattagcgtgctacatgagaaa  5403200  Previous    Next  AGI:  At3g15950.1    Description:  (TSA1-LIKE); protein binding. similar to TSA1 (TSK-ASSOCIATING PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G52410.2); similar to viral A-type inclusion protein, putative [Trichomonas vaginalis G3] (GB:XP_001319569.1); contains InterPro domain t-SNARE; (InterPro:IPR010989) Range:  from: 5397575    to: 5402658    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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