Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->DOF5.7(2)          ---------                                                               <---------MYB52(1)           ---------                                                          <---------WRKY18(1)        <---------WRKY12                                                         --------->WRKY12           --------->WRKY18(1)                                                         ----------->HVH21         <-----------HVH21                                                   --------->GLK1(1)  <---------ANAC58 --------->At4g35610                                                   <---------GLK1(1)  <---------ANAC58 <---------At4g35610                                       <---------ZAT14   --------->WRKY38(1)    --------->SPL7                --------->AHL20(2)     --------->ZAT14 <---------ANAC58        --------->MYB52(1)         --------->ANAC58  --------->ANAC58   --------->At4g35610 <---------At4g35610<---------WRKY38(1)         --------->ANAC58  --------->ANAC58----------->HVH21  <-------GAMYB  ----------->HVH21 ------DOF2    --------->AHL20(2)    --------->ANAC46  <---------ANAC58      <---------ETT(1)     ---   ttgagcccctccagcaaataaaaaacaaaacgctaatccacagaactgacctgaattccttgaccgttatctgcttgttccgaccggtcatcggaagcca  5376800                                                                                                    <                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                             <-----------GT1               <---------                                                         ------->TEIL                    <---------DEAR3(2)                                                      --------->ANAC55(2)                <---------MYB46(3)       ----------->HVH21                              --------->ANAC58                  <---------TOE1(2)  --------->ANAC46                <---------ANAC46    <---------ANAC55(2)               <---------DEAR3(1) >ANAC58              --------->LBD16    ----------------->AGL1--------->ZAT6           <---------TOE2(2) >ANAC58          ---------->ID1 <---------LBD16      --------->ANAC58        <---------At4g35610---- ------->DOF2<---------MYB52(1)----------->HVH21  <-----------HVH21   --------->YAB1  <-----------HVH21   taacgcgaaatgaccgttttgtccctgaacagtttgacgggtttcgaaaactggtcacgaatttgacactactcatagtcatcttcttcgtcggttctaa  5376900                                                  <---------ANAC46     <---------ZAT14                              <---------LBD16     --------->ZAT14                      ------->GAMYB                         <---------CCA1(2)  --------->LBD16                 <---------GLK1(1)--------->ANAC46    <<<<<<<GRF7 ---------LBD16                   --------->GLK1(1)--------->LBD16   ----------->HVH21 ------ZAT2                  --------->ALFIN1    <---------LBD16 <---------ARR14(2) ----->ZAT2 --------->ZAT2 <---------ANAC58     --------->MYB52(1) ----------->RAV1(2) ------At4g35610           <---------ANAC46   <---------SPL7     --------->ARR14(2) --ARR10    <---------ZAT2 <---------ANAC58 ----------------->AGL1--------->GLK1(2) ----->At4g35610       ---------->DOF2   --------->MYB46(3)      <---------GLK1(2)  <----------DOF2<-   gctccggtgaacagagctcgaacgagaaagcgtgggaactccaatcgccataccgggaacgaagacagaacctgacatctctctatcttttctctctaat  5377000                                     --------->REM1(2)                                     <---------ZAT14                                  <---------ANAC58            --------->ANAC58             <-----------HVH21    <---------ANAC58            --------->O2                         <-  <---------ANAC58                <---------ANAC46            <---------O2                    <------  <---------ANAC58           <---------AtLEC2                 --------->ANAC58                <------  <---------ANAC46         <---------YAB1                     --------->ANAC46                <------ ---------->ID1        <---------ANAC58                   --------->CCA1(2)            --------->ANAC55(2) ----------RAV1(1)     <---------ANAC58      <------ZmHOX2a(1)----------->HVH21       <---------TOE1(2)   tctgtcgtattttgtggtcacacaggcttgtgaatggcgtgaacagaggataagagagagagacacgacgcttaccaaaaacacatctcacgttttgcgt  5377100                                              <---------ANAC58                                              <---------ANAC58                                         ------->MYC3                                         <-------MYC3                                        ==============================bZIP_DOF                                        <---------TGA1a                                             <                                        <---------O2                                               --                                        --------->TGA1a                                       <------                                        --------->O2                                          -------                                        ==============================bZIP_DOF                -------                                      <---------ALFIN1                                        -------                                     --------->TOE2(2)                                        -------                                --------->MYB46(3)                                           <-------TEIL                                <---------MYB52(2)                                   <------ZmHOX2a(1)                              --------->ANAC46<---------ANAC46                       *TSS  --------->ARR14(2) --------GLK1(2)       --------->ANAC58<---------TOE1(2)                      --------->GLK1(2)   --- ---ANAC46             --------->ANAC58<---------TOE2(2)      --------->YAB1 --------->ARR11(3)   --- ---ANAC58       --------->ANAC58    --------->TOE1(2)     <----------DOF2   <---------GLK1(2)------- ---ANAC58       --------->ANAC58--------->AtMYB61  <-----------GT1      ---------->DOF2   <---------ARR14(2)   cgattcttgaaactttagaacgcaaacgctccccacaaacccacgtttgcgttttcactcactttcataacaaactaaagattctgaggaacaaatacgt  5377200         ----------->GT1        --------->TOE2(3)        --------->TOE1(3) ------ZmHOX2a(1)                                                                            <------- --------->GT1                 <---------AHL20(2)                                        --------->AHL20(2) ---ANAC55(2)           <---------AHL20(2)                                               --------->ATHB51 -->ANAC55(2)     --------->TOE2(3)             --------->ARR11(3)                       <---------AHL20(2) -->ANAC55(1)   --------->ARR11(3)              <---------ARR11(3)                       <---------ICU4 -->ANAC58      <---------ARR11(3)    <---------ANAC58                            ----------->GT1 -->ANAC46      --------->GLK1(2)     <---------ANAC58      <---------AHL20(2)   --------->MYB59 ------>ANAC58  <-----------ARR10     <---------ANAC46      --------->AHL20(2)   <---------TOE2(3) ------>ANAC58 --------->RVE1(1)    <-----------GT1      <---------AHL20(2)      <---------TOE2(2)<-- -->ANAC58     --------->CCA1(1)<---------AHL20(2)      --------->AHL20(2)--------->YAB1--------->ICU4   aaggaaaaaacctgaaaaaatcttagtttattttttatttgcctgtttaatatctatattatataatttgtccaaataatacttaggttaattattttct  5377300     --------->ARR11(3)                                                                             <     <---------ARR11(3)                                          <-----------GT1                  ---     --------->GLK1(2)    ----------->GT1                    <----------DOF2                      <--    --------->RVE1(1)<---------AHL20(2)                      <---------DAG2    ----------->GT1  <---- ----GT1            <---------AHL20(2)          --------->MYB52(1)<-----------GT1             ------- --------DOF2       --------->AHL20(2)--------->GLK1(1)   <-----------GT1  <---------YAB1 <----------   ctttaaaaatcttcattttgtattaatttggcaaaatcagacatccaacttaacggatgttaactttttaacagatgtttatagttaaaatttaactcat  5377400           --------->AHL20(2)   <-----------GT1                                                                          --------- ---------ICU4 <-----------GT1                                                              --------- ------>ARR11(3)                                  --------->TOE2(3)         <---------AHL20(2) -------ARR11(3)          <-----------GT1         --------->TOE1(3)        --------->AHL20(2) -----YAB1<---------AHL20(1)                   <-----------GT1--------->At5g28300           <-------- -->YAB1  --------->AHL20(1)               --------->AHL20(1)----------->GT1--------->AHL20(2)    xxx -GT1    --------->AHL20(2)           --------->AHL20(2)     <---------MYB46(3)            ----------   gatatttacaaatatatatacaatctattttctatattctataaatatgttaccttagtctagcggttaaacacagatttaattttctgatatacctggg  5377500                                                              ---------->DOF2                                                             --------->AHL20(2)        <---------ANAC58                             --------->HSFB2a(2) >TOE1(2)                                        <----------DOF2  <---------ARR11(3) >TOE2(2)      <---------ANAC46      ---------->ID1  <---------LBD16 -LBD16 <---------ANAC58         <------------------------ANAC81  --------->ARR11(3) xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <-----------GT1  <---------HSFB2a(2)  --------->HSFB2a(2)       < ->RAV1(2) --------->SPL7   <----------DOF2 <<<<<<<<<TBF1    <---------AHL20(2)          <-------TEIL   ttcgaaactttcttacgacgtttatagtctcttttttttttccttcttcttctttctcggaatttaaagatttcatccagacaaaattaagttcatcttc  5377600                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   --                                                        <---------ZAT2                            <--                                                       ------->TEIL                       <---------AHL20(2)                   <-----------GT1                  <---------REM1(1)                    --------->AHL20(2)         <---------TOE1(1)                  --------->ANAC46                             <---------AHL20(2)         <---------TOE2(1)                  --------->ANAC58                         <---------AHL20(2)        --------->SPL7                      --------->ANAC58   <----------DOF2       --------->AHL20(2)    <---------------AtSPL8      <----------ID1      <XXXXXXXXXXXXXXXXXXXXMIR843   <----------DOF2 <-- ---------YAB1    <-----------GT1         --------->ZAT6--------->ZAT2    ---------->DOF2<---------AHL20(1)   ttcttattggtacgatgtttttaacttctcaagagagacaaataacacgaattgatgaagctcggcttaacttcgacaaagctacttttaatttttttcg  5377700  Previous    Next  AGI:  At3g15900.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK95820.1) Range:  from: 5376257    to: 5377185    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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