Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->YAB1             --------->YAB1            ----------->GT1         <----------DOF2              <---------AHL20(1)     <---------------AGL15       ---------->ID1                  <---------AHL20(2)     --------------->AGL15 --------->ATHB51                      --------->AHL20(1)    <-----------------AG   --------->ATHB12          --------->At5g28300    <-----------------AGL1 <---------AHL20(2)        <------NtERF2         <---------HSFB2a(2) ------    <-----------------AGL3 --------->AHL20(2)       ----------->GT1        --------->HSFB2a(2) ------    <-----------------AGL2--------->AHL20(2)       <---------ANAC46  <-------TEIL       <---------ZAT14   <---------At5g28300    <---------AHL20(2)    --------->ALFIN1--------->YAB1  <------ZmHOX2a(1)  <-----------GT1         <---------AHL20(1)  <---------O2      --------->AHL20(2) --------->ICU4   agttttactgcaaatggtaatcaaacaaattatttgttctttcatgagaagtggcggtaaattctattatattcattctagaggaatgagtaaacttaag  5362700                                                                                           --------->AHL20(2)                                                                                           <---------AHL20(2)                                                                                   --------->ATHB12                                                                  <---------ZAT2   <---------ICU4                                                                  --------->ZAT2   <--------HAHB4                                                                  --------->At4g35610  --------->AHL20(2)                                                                  <---------At4g35610  <---------AHL20(2)                                 --------->LBD16                 ------>ZmHOX2a(1)<---------ATHB12                               <-----------RAV1(2) --------->AHL20(2)           --------->YAB1                           --------->KAN4(1)      <---------AHL20(1)         --------->TOE2(3)      - --->ANAC58               <---------KAN4(2)       <---------ARR11(3)         <----------DOF2       <- --->ANAC58               <---------TOE1(2)       --------->AHL20(1)      <---------ARR11(3)     ----   caaaatacccatgcattaatgcatatcgaatgttcaggggttttttgcacaatatatatacttagtcctgctgcaatttctttaatcatttatataaatc  5362800                              --------->ANAC46                           <---------At5g28300     <-----------GT1       --------->MYB52(1)                                        ---------->DOF2 -------->YAB1            <-----------GT1                ----------->TBP         ------->TEIL       < --------ATHB12      --------->AHL20(2)                 ------->TEIL            <---------AtLEC2    - ----->WOX13(1)      <---------AHL20(2)              ----------->GT1  <------------CBF           <---   tatcatttttcgcatcttgttttttaatttaccggccatggataagtttttagtcatgtatatatagtagcacattgaatatgcatgtaaaggcataaac  5362900                                                                                               ------                                                                     ---------->DOF2       --------->ZAT6          --------->ANAC58                                           ================================          --------->ANAC58                                      ----------->GT1           -----------        ---------->DOF2                                  <-----------GT1                 --------->MYB52(1) ---------HSFB2a(2)                          <----------DOF2 <----------DOF2           <---------MYB52(2) -------->HSFB2a(2)                          <---------DAG2 <---------DAG2      ------->GAMYB  <----- -------DOF2   --------->ICU4 --------->REM1(1)        <-----------GT1          =====================   ttttagaacattaagccatgatgtctctatctacaactctcaaaccgctttctcatttttcaccttttgttaaaagacataaccccaaaactaacaatac  5363000                                                                     <------ZmHOX2a(1)                                                                    --------->ANAC58                                                               ----------->HVH21                                                            <XXXXXXXXXXXXXXXXXXXXXXXMIR836                                                        ------>ZmHOX2a(2)                --------->YAB1                          ====================HOX2a_HOX2a         ----------->HVH21                             =====================HOX2a_HOX2a       --------->O2                                    <------ZmHOX2a(2)       ==========================bZIP_DOF             <---------ARR11(3)       ==========================bZIP_DOF             --------->ARR11(3)       <---------TGA1a                                --------->GLK1(2)          --------->MYB52(2)       <---------O2                                   <---------AGP1--------->ANAC58  <---------ZAT18                                     <---------ARR14(2)         <---------MYB46(3) --->ARR11(3)   --------->ANAC46                      <-----------ARR10          <---------ANAC58 ================bZIP_DOF                             --------->ARR14(2)         <---------ANAC58   < ->CBF --------->TGA1a<----------DOF2                <------ZmHOX2a(1)         <-----------HVH21    < ----ARR11(3)   --------->ANAC55(1)               <------ZmHOX2a(1) --------->ANAC46                < ================MYC_MYB         <----------DOF2  =============HOX2a_HOX2a --------->MYB52(1)      --   cttgttcacacttgacacacataactttacaaactctttttggtccaaacgaggaggatctgtgtctcacaggaaacacacggtcgtggctgtttatgag  5363100                                                  <---------MYB46(3)                                                 --------->ALFIN1                                                 <---------ANAC46                                                 <---------AtMYB61           <---------ETT(2)                   <-----------RAV1(1)           --------->ETT(2)                   --------->ALFIN1     <------ZmHOX2a(2)                        <---------AtMYB61                                   ---    <---------ARR14(2)                     --------->ALFIN1                                       ---    --------->ARR14(2)                    <-------GAMYB                                           <--   <---------ARR14(1)                    <---------MYB46(3)                                       <--  --------->LBD16                       <---------TOE1(2)                                         <-- ------NtERF2   --------->At4g35610     <---------TOE2(2)                                         <-- ---------LBD16 <---------At4g35610    <------NtERF2                        ========================= ---------At4g35610                  --------->ETT(1)                       ---------->DOF2       <-- ------->MYB52(1)                  <-----------HVH21                 --------->ICU4               <--   gcaccggatcatgtcgagagctcatggagaagactcttgtcggaggttgtggtggtgagaacgaagaggtcattttgggaaaggagttggacttcttggg  5363200 ------>O2 ------>TGA1a -------O2----------->GT1 -------ANAC55(2) -------TGA1a -------ANAC46 =======bZIP_DOF                                                        <---------DAG2 -------ANAC58                   <---------MYB46(3)            <-------GAMYB   <--------------------- -------ANAC58          <------NtERF2                   <-----------GT1 <----------DOF2<---------MYB52(1)   acgtgagcaagttagtaatattcgtcgggactcatttgttgagcctcttggctccattttacttcagttggaggctttttgggttttcccttggctcgtt  5363300                                                                                                  <--                                                                                                  <--                                                                                                -----                                                                                               ------                                                                                           --------->SPL7                        ---------->ID1--------->HSFB2a(1)        <---------RAP2.6(3)      --------->MYB52(1)         --------->ARR14(2)           <---------HSFB2a(1)     --------->At4g35610        <---------SPL7         <---------ARR14(2)        ================================HOX2a_HOX2a          <---------ANAC58         --------->GLK1(2)         <------ZmHOX2a(1)        ------>ZmHOX2a(2)  --------->ARR11(3) <--        <---------GLK1(2)      --------->TOE1(2)           <---------At4g35610 <---------ARR11(3)<--- <---------YAB1<----------DOF2--------->YAB1               --------->At4g35610--------->GLK1(1)<----- ---ANAC81--------->At4g35610<---------YAB1     --------->DEAR3(1)      <---------ANAC46<---------ANAC58   ttcatcaatggaatctgcattaccttgtcttatcataggaacctttctcaccgaagttttgatctgccgaaatggctcgaatatctatttgcttacggtg  5363400                                                                                      --------->TOE2(3)                                                                                      <----------DOF2                                  <---------GLK1(2)                                ------->TEIL                                --------->AHL20(1)                              --------->ANAC55(2)       <----------DOF2          --------->ARR11(3)                              <---------ANAC55(2)      <---------ANAC58          <---------ARR11(3)                           <---------AHL20(2)      <---------ANAC58         <---------AHL20(2)                         <---------AHL20(1) -------ANAC46             --------->AHL20(2)                             --------->AHL20(1) -------ANAC58             <---------AHL20(2)                          --------->AHL20(2) ->NtERF2                --------->AHL20(2)                           <---------AHL20(1) --->ALFIN1 <---------TOE2(3)--------->AHL20(2)                       --------->ARR11(3) -------ANAC58           <---------AHL20(2)                      <---------TOE2(3)<---------CCA1(2) ---NtERF2  <---------TOE1(3)<---------AHL20(2)         --------->TOE2(3)<---------AHL20(2) --------- ----DEAR3(1)          --------->AHL20(2)             ------->TEIL    <---------ARR11(3)<---------AHL20(2)   gcgttctggcttttcaggtttacatatatatatatatattctcactgtttgatatgaacattagattaagaatatatatattatgtatctttaatcgcaa  5363500                                                 --------->MYB52(1)                                                --------->AtMYB61                                                ------->GAMYB                                               <---------MYB55(2)                                               --------->MYB46(3)                                              -------->P                --------->ANAC46           <---------At4g35610               --------->ZAT18        <---------ANAC58                                     ----------              <---------ANAC58        <------MYB83                                         ==========              <---------ANAC58        <------MYB46(1)                                     --------->ANAC46             --------->ZAT18          <---------ANAC58                                    <---------ALFIN1             <---------ZAT18         --------->MYB55(2)         --------->ANAC58        <---------ALFIN1          <---------ANAC58           <---------MYB46(3)--------->SPL7                   ----------->RAV1(1)          <---------ANAC58          --------->ALFIN1<---------DEAR3(2)               --------->PCF2        <---------ANAC58  --------->ANAC58 --------->At4g35610  --------->ANAC58   ----------->HVH21        <---------ANAC46  --------->ANAC58--------->ANAC58  --------->YAB1       <---------O2       - >ANAC46<---------ANAC58--------->GLK1(1) --------->ANAC58 <---------YAB1        --------->O2--------   cttctaaattgtgtgtgcgcgcagggagacccaatagagtgggtgagcaaccatcggtaccatcataagcattgtgagacacaacgtgacccacacagcc  5363600  Previous    Next  AGI:  At3g15870.1    Description:  fatty acid desaturase family protein. Identical to Probable lipid desaturase ADS3.2, chloroplast precursor (ADS3.2) [Arabidopsis Thaliana] (GB:Q9LVZ3;GB:Q5IGR4); similar to FAD5 (FATTY ACID DESATURASE 5), oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G15850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62719.1); contains InterPro domain Fatty acid desaturase, type 1, core (InterPro:IPR015876); contains InterPro domain Fatty acid desaturase, type 1; (InterPro:IPR005804); contains InterPro domain Fatty acid desaturase, type 1, C-terminal; (InterPro:IPR001522); contains InterPro domain Fatty acid desaturase, type 1, N-terminal Range:  from: 5363124    to: 5364550    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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