Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        <---------STY1(2)                                      --------->STY1(2)                                     ------>MYB83                                     ------>MYB46(1)                             --------->YAB1                             <---------ICU4                            <---------YAB1                           <---------AHL20(2)                           --------->AHL20(2)                          --------->YAB1                         <---------YAB1                      <---------AHL20(1)                      --------->AHL20(1)                                                 ----------->GT1 ------>At4g35610     --------->AHL20(2)                                    --------->YAB1         <- -------At4g35610     <---------AHL20(2)                                  ----------->RAV1(1)  ------   agcacaagaagttgagcatcaaaatttattataatcacctagctagtcaccctcacgactagactcttactcatcccaacataattttaagaagaaaaaa  5348900                        --------->MYB52(1)                        <-----------GT1           <---------ANAC58                      <---------At4g35610                   <---------ANAC58               <---------ANAC58                      --------->At4g35610                   <---------ANAC46              <------NtERF2                         --------->MYB59                   <---------ANAC58           <-----------HVH21                        >>>>>>>GRF7                   ----------------->AGL1   --------->LBD16                           <-----------RAV1(2)               <---------DAG2         --------->HSFC1(2)                 --------->DOF5.7(2)        <---------TOE2(3)             <---------HSFC1(2)                 <---------MYB52(1)    ------ -----ZmHOX2a(1)<----------DOF2  <------ZmHOX2a(1)<---------ANAC46      --------->TOE2(3)  <-------TEIL ---->DOF2  <-----------GT1------->GAMYB   <---------LBD16  <------ZmHOX2a(1)       <-----------HVH21   aggatgaattaagtttacctttcgtttaacggtaaggagacacttcccggtcgcgtccatgaggacaatctcatcgttatctcttgtgtcaggtccataa  5349000                                       --------->RAP2.3(1)                                       --------->ATERF1(1)                                       <------NtERF2                                      <---------ERF1                                      <---------ORA47(2)                                      <---------RAP2.3(1)                                      <---------DEAR4(2)                                      ------>NtERF2  --------->LBD16                               --------->YAB1       <---------DEAR3(1)                          --------->ZAT14          <---------LBD16                        --------->ANAC46         --------->DEAR3(1)                        --------->bZIP60(2)--------->ANAC58                                  --------                        --------->ANAC58   --------->ANAC58                              <---------ANAC58                        --------->ANAC58 <---------ATERF1(1)                           <---------MYB46(3)                      <---------ALFIN1<---------ATERF1(1)                          --------->MYB55(2)                --------->bZIP60(1)  <---------RAP2.6(2)                           <---------MYB46(3)                <---------GLK1(1)    <---------RAP2.3(2)                         --------->At5g28300   -------->P   --------->TGA2(1)    <---------RAP2.3(3)--------->ZAT14        <---------DEAR3(1) --->YAB1       <---------bZIP60(1)  <---------DEAR3(1)--------->ALFIN1  --------->AtLEC2<---------ANAC58   gaatcaaccctgaagatgatatcaccacggcagtcataggcggcgaagccatcgccggtgtagaagagagaagtcttgcagacggtgagtggtttgtctt  5349100                                                                                                 <---                                                                                                 <---                                                                                               <-----                                                                                           <---------AHL20(2)                                                       --------->HSFB2a(2)                <---------YAB1                  --------->ETT(2)                  <----------DOF2                      <---------AHL20(2)             <----------DOF2                    <-----------------AGL3                 <---------YAB1      --------->YAB1  --------->AtMYB61      <-----------GT1                         <---------AHL20(2)   ---------->DOF2<---------ETT(2)           ---------->ID1                         <---------YAB1 -->ID1 --------->CCA1(2)                <----------DOF2    <---------AtMYB61      --------->AHL20(2)   cttggtaaagataagctttgtcgaccacaattctttctcccatctttttcccttcttttggaatggtctcttcaactaattccatttttatttttatttt  5349200                              --------->ARR11(3)                            ----------->ARR10              <---------AHL20(2)    ------->TEIL<---------ANAC58                    <---------ATHB12 <---------ANAC46 --------->ALFIN1            --------->MYB52(1) ------ANAC58   <---------ANAC46            <---------WOX13(1)     --------->YAB1                ---- ------ANAC58   <---------ANAC58    <---------TOE2(3)--------->ATHB12--------->CCA1(2)         *TSS ----AHL20(2) <---------ANAC46<---------GLK1(2)<---------TOE2(3)  <---------YAB1             <-------   cttgtgtatgtgtgttttgtgtgtggaagttagattttgtggtttgattaacgaatgatttttaatctatgatatggacactcttctcttccttcctttg  5349300                                                             <---------ARR11(3)                <---------WOX13(1)                           <---------AHL20(1)                <--------P                 <---------ANAC55(2)  <----------DOF2               <-------GAMYB      --------->ANAC46           --------->ARR11(3)              ----------->GT1     --------->ANAC58          --------->CCA1(1)       <---------AHL20(2)    <-------TEIL  <---------ANAC46 --------->RVE1(1)         ----------->GT1       --------->AHL20(2)<-------TEIL ----------->HVH21 --------->AHL20(2)        --------->DAG2    <     <-----------TBP  --------->CCA1(2)  <---------ANAC46<---------AHL20(2)      ---------->DOF2 <--- ------>ID1   <---------MYB46(3)  --------->ANAC58   --------->AHL20(2)  <---------At4g35610     <--- ---DOF2   <-----------RAV1(1)  <---------ALFIN1    --------->ICU4       --------->At4g35610  -------   tctctctatttatatgtggttgatatatacgtacacacgcttgacgcgtatgtaatgaattaatatctttaagtctgcttcaaaaaagtcgtaacatata  5349400                                              <---------ICU4                                             --------->AHL20(2)                                             <---------ATHB51                                             --------->ICU4                                             <---------AHL20(2)       <-----------GT1                 --------->YAB1   <---------YAB1              <-----------HVH21      <-----------GT1 ---------YAB1        --------->YAB1  <-------TEIL<---------AHL20(2) ------YAB1------>ZmHOX2a(1)---------->DOF2--------->YAB1                                  --------->AHL20(2) ------AHL20(2)       -------->HAHB4<-------MYC3 <---------AHL20(2)                        <---------AHL20(2) -->AHL20(1)          <---------ICU4------->MYC3 --------->AHL20(2)           --------->MYB52(2)    <   ttattgttatttcctattggctaataataccaaagtcacatgcataaataattaaataacatgctataacttaaaaatgttagtttaatctgttttatta  5349500                                          <---------CCA1(2)                                     <----------DOF2                                   ------>NtERF2                        <------ZmHOX2a(1)                                  --------->DEAR3(1)                   <------MYB83                               --------->ANAC58                        <------MYB46(1)                               --------->ANAC46                       --------->MYB59                               --------->ANAC58                      <--------P                     < ----------DOF2             <---------REM1(2)          ---------->DOF2--------->MYB111(2)    <-------   ggctttattctaaactatttttagactgtttacacgccgcttttatatccaagttgcaaaagaagaaacaggtaggaagattgtttgaagtttttatggt  5349600                                                                        --------->ARR11(3)                                                                        <---------AHL20(2)                                                                        --------->AHL20(1)                                                                        <---------ARR11(3)                                                                        --------->AHL20(2)                                                                        <---------AHL20(1)                                                                      --------->GLK1(2)                                                                   <---------TOE2(3)                                                              --------->ATHB12                                                             <---------AHL20(2)             ---------              ----------->GT1                                <---------YAB1            --------->YAB1   <---------TOE2(3) <---------YAB1                       <---------AHL20(1)       --------->AHL20(2)  <-----------GT1  <--------HAHB4                         <---------AHL20(2)       <---------AHL20(2) <-----------GT1  <---------YAB1       ---------->DOF2    --------->AHL20(1)      --------->AHL20(2) ---------AHL20(2)--------->ICU4  <---------AHL20(2)      --------->AHL20(2)  <---------YAB1--------- --TOE2(3)<---------TOE2(3)       --------->AHL20(2)   --------->AHL20(2)   ----------->GT1 <--------   attttaacattttaggtggtattattagtttgggatttaaataaagttttaatgacttaaaatattattgagaatatattgttatttaatcaaatttttt  5349700                   --------->AHL20(2)               <---------AHL20(2)               --------->AHL20(2)              <---------AHL20(2)              --------->AHL20(2)             <---------YAB1      ----------->GT1                    --------->ICU4      <------MYB83 <---------AHL20(2)    <---------YAB1      <------MYB46(1)           <---------AHL20(2)     --------->MYB46(2)        <---------AHL20(2)                    --------->AtLEC2     --------->MYB59    --------->AHL20(2)--------->ATHB51          --------->WOX13(1) >AHL20(2) <--------HAHB4      --------->AHL20(2)             ---------->DOF2 >AHL20(1)--------->ICU4--------->AHL20(1)--------->ATHB12 --------->YAB1        <---------ZAT6 -AHL20(2)<---------YAB1<---------AHL20(2)-------->ATHB1<----------DOF2        <---------ANAC46   aaaaagtttggtattattaatttaaattttttataaatttagaattattgaattcatacttttataaagtcattcaaagttttgtgttattcaactaaaa  5349800  Previous    Next  AGI:  At3g15810.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G80120.1); similar to unknown [Populus trichocarpa] (GB:ABK95691.1); contains InterPro domain Protein of unknown function DUF567 (InterPro:IPR007612) Range:  from: 5347829    to: 5349295    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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