Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ---------->DOF2      --------->LBD16     --------->RAP2.3(2)     <---------ANAC46     ----------->GT1     --------->RAP2.6(2) ------->LBD16 -->ZmHOX2a(2) ---->ARR14(1) ---->CCA1(2) --ZmHOX2a(2)        --------->HSFB2a(2)                                             ----------->GT1 ----ARR14(2)        <---------HSFB2a(2)                                          <---------ANAC58 --->ARR14(2)    <------MYB46(1)             --------->AHL20(2)     --------->HSFB2a(1)      <------- --->ARR11(1)    <---------MYB46(3)       <------ZmHOX2a(1) <---------MYB46(3)    <---------ANAC46 ----ARR11(3)    <------MYB83 --------->GLK1(2)          ------>MYB83             <---------ANAC58 --->ARR11(3)   <---------AtMYB61        --------->ICU4  --------->MYB52(1)     <---------ANAC46 -->RVE1(1)    <---------MYB52(1) ---------->DOF2        ------>MYB46(1)       <---------MYB52(1) >DOF2--------->At5g28300    <---------GLK1(2)         <---------MYB59       <-----------RAV1(1)    <   ccgagagccgtaaaagcgttggtcgagaaccgattctaaagtgaggattatataagacctaatggttcgaagagtccaactgttgtgtggaatataaaca  5341000                                                                  ------>NtERF2                                                               --------->LBD16                                                          <---------GLK1(1)                                                          --------->GLK1(1)                                                     --------->ANAC58   <---------WOX13(1)                                --------->ANAC58  >>>>>>>>>ARR2                                      --------->ANAC46 --------->ATHB12             <---------YAB1       --------->MYB46(3) ----GT1                  <---------ANAC46         <---------MYB52(2) ---------YAB1      --------->GLK1(2)            ----------->RAV1(1)             <---------REM1(1)   gtttgattgtttttgcagtgagaatgtgacttatgagagtctacttgggagcaacaagcgatttccgaggcctatacctcttgatgtaagttcaactcca  5341100                                                                                 <---------ANAC58                                                                      <-----------RAV1(1)                                                                  <------ZmHOX2a(1)                                                                 --------->ANAC58<---------ANAC58                                                                 --------->ANAC58<---------ANAC46              <---------MYB52(2)                          --------->YAB1  --------->ZAT18            <-----------GT1               <---------YAB1  <---------ICU4  <---------ZAT14         ----------->GT1                <---------MYB46(3)--------->ATHB12<---------ZAT18           >       <------ZmHOX2a(1)            <---------YAB1       <---------YAB1   --------->ZAT14     <------   tgaactggaggaagtaactatccattctcatccaaattttgtttgttattgaaagttttatcattgcaggaaatggtgcagtttcttgttgaagtttggg  5341200                                                                              ----------->RAV1(1)                                                                              ------>MYB46(1)                                                                              ------>MYB83                       <---------ARR11(3)                                   --------->MYB46(3)                       --------->ARR11(3)                           <---------ARR11(3)<---------ARR11(3)                       <---------GLK1(2)                            --------->AHL20(1)--------->ARR11(3)          <---------REM1(2)                             <---------ZAT2      <---------MYB55(2)          <---------ARR14(2)                            --------->ZAT2     --------->ANAC58      --------->ARR11(3)   <----------DOF2              --------->At4g35610--------->ANAC58      <---      <---------ARR11(3)--------->GLK1(2)     --------->YAB1        --------->ARR11(3)--------->AHL20(1) >>>>>>>>TBF1      ---------->DOF2        <---------YAB1<---------At4g35610--------->ANAC46<---------MYB46(3) ---HSFB2a(2) ----------->GT1   <-----------GT1  ---------->DOF2   --------->AHL20(2) <---------AHL20(1)   aagaagaaggtctatacggctaaaagattcttttttacacatttacaattgtaaagagagctgagaaaaatatatacacccaacaaaaaatatttgttga  5341300                                                                         <-------MYC2                                                                         <-------MYC3                                                                         ------->MYC4                                                                         <-------MYC4                                                                         ------->MYC2                                                                         ------->MYC3                                                                        --------->TGA1a                                                                        <---------TGA1a                                                                        <---------O2                                                                        --------->O2                                                                   <---------SPL7                                                                  <---------ANAC58             <---------AHL20(2)                                   <---------ANAC46            --------->AHL20(2)                                    <---------ANAC58        <---------AHL20(2)                                   <------------CBF       --------->AHL20(2)                                  <---------AHL20(2)              --------->GLK1(1) <------ZmHOX2a(2)                                        --------->AHL20(2)           --------->YAB1 ------WOX13(1)        --------->ATHB12 --------->LBD16   <---------AHL20(2) ------->TEIL  <---------GLK1(1)   tggatcaaattttataaaattctcttgatttggagtaatttccacaaaaatgttttttttttaaattgtcgtacacgtgtatgtctgaatcagaaacccc  5341400                                                           <---------ETT(1)                                                        -------->P                                                        ------>MYB46(1)           --------->AtMYB61                                                --------------------->WRI1  --------->TOE2(3)                                 *TSS           <----------DOF2    --------->ANAC58    <---------AHL20(2)          <------ZmHOX2a(1)       ------>MYB83      -------->P   --------->YAB1    <---------AHL20(2)        <---------ANAC58    --------->ANAC58  --------->AHL20(2)--------->AHL20(2)         <---------ANAC58--------->AtMYB61  --------->ZAT6   ttaaataaaaatgagttcttaattttatcgtcgaggaaaaatggcgatggctttgtccaacccgaccacaagcactaacctctaccactactcaattctc  5341500                                                                      --------->ABI4(1)                                                                      <---------ATERF1(1)                                                                      ------>NtERF2                                                                     --------->RAP2.3(3)                                                                     --------->RAP2.3(2)                                                                     --------->DEAR3(1)                                                                    --------->RAP2.3(1)                                                                    --------->ATERF1(1)                                                                    --------->ERF1                                                                    --------->DEAR4(2)                                                                    --------->ORA47(2)                                                                <---------DOF5.7(2)                                                               --------->ARR14(2)                                                               <---------ARR14(2)                                                              --------->DOF5.7(2)                                                           <------NtERF2<---------ALFIN1                                                          --------->LBD16                                                          ------>NtERF2<------NtERF2   <---------MYB46(3)                                                         <---------ALFIN1       <---------DEAR3(1)                                                         --------->ANAC46      <------NtERF2               <---------CCA1(2)                        <---------LBD16--------->ATERF1(1)  =========              <---------SPL7                            --------->ATERF1(1)   ------>NtERF2 ------>ZmHOX2a(1)           --------->ABI4(1)                            --------->MYB46(3)    <-----------HVH21           ------>NtERF2 <---------At5g28300     <---------ANAC58  <---------RAP2.3(1)<---------AtMYB61          --------->ANAC46                 ------>ZmHOX2a(1)<---------ANAC46  <---------ATERF1(1)          --------->DEAR3(1)           --------->ORA47(1)--------->DEAR3(1)  <---------DEAR3(1)======         --------->MYB46(3)           --------->DEAR3(1)<------NtERF2--------->RAP2.6(2) --------->PCF5         --------->DEAR3(2)        <---------ALFIN1    <---------ATERF1(1)   --------->DEAR3(1)------        <---------At5g28300--------->DEAR3(1)    <---------ANAC58 --------->ANAC46<---------ANAC46   tcgccgttctcaccgccgtatcaccttcaccgtcgaaacaccgtcctactagcgagtccccgccgtttacgccgcctcgccgtcgctggtggtcctcctt  5341600                       ----------->RAV1(2)                      ------>NtERF2                      --------->LBD16                     --------->DEAR3(1)                    --------->ATERF1(1)                   <---------ATERF1(1)                   ------>NtERF2                  <---------ALFIN1                 --------->ATERF1(1)                <---------ATERF1(1)                ------>NtERF2              ======================HOX2a_HOX2a--------->HSFC1(2)              ------>ZmHOX2a(2)                --------->HSFB2a(1)            <---------ARR14(2)          <---------At4g35610          ----------->HVH21             <---------ZAT2          ----------->ARR10  <------ZmHOX2a(1) <---------HSFC1(2)                               -----     --------->ANAC46<---------ALFIN1   --------->At4g35610                                     ----- ====================HOX2a_HOX2a        --------->ZAT2                                          <---- ------>ZmHOX2a(1)--------->DEAR3(1)--------->ANAC46     <---------YAB1             <----------DOF2 ====================HOX2a_HOX2a  <---------ALFIN1<-------TEIL                      ------>ZmHOX2a(1) ====================HOX2a_HOX2a  --------->AtMYB61  <---------GLK1(2)        --------->MYB59------>ZmHOX2a(1) >ZmHOX2a(1)--------->ARR14(2)--------->ZAT18  <---------HSFB2a(1)   <---------WOX13(1)      <-------   ctcctccaggccctgatccgcctccgcctgaggacaccactcagctagaaggttcgattcttcttgcccagattgatattttggtcctttgaatcctact  5341700             <-----------RAV1(1)       <------MYB83       <------MYB46(1)      <---------MYB46(3)      <---------AtMYB61     <--------P    <-------GAMYB   <------MYB46(1)   <---------MYB46(3)   <------MYB83--------------->AtSPL8             <---------ANAC46  --------->MYB59                      <---------DAG2  <---------AtMYB61                    <----------DOF2 ---------->AGL15        <----------DOF2        <---------ANAC46 ---------------->WRI1  <---------ANAC58       <---------MYB52(1) ------DOF2<----------DOF2          <-----------GT1 -----------------ANAC81<---------ANAC58     <-----------RAV1(1)                  <---------MYB52(1)   ttgtttggttggtctttgttgtacttgcttttcagttttcactttaactgttgtgttttgggtcgaaagtttcaatttttatccgatagtttgatataag  5341800                                                                 --------->HSFB2a(2)                                             <---------YAB1      <---------HSFB2a(2)             <--------P            <---------ZAT2           --------->HSFC1(2)          <---------TOE1(3)        --------->ZAT2           <---------HSFC1(2)          <---------TOE2(3)        <---------At4g35610     ------->TEIL        --------->ATHB12          --------->MYB59       <---------ANAC58        <---------YAB1        <---------YAB1      <----------DOF2           <---------ANAC58      --------->YAB1        <------ZmHOX2a(1)   <----   tatggagtcttttaggttagtacttggtattgaatcgtgctgagattgttattgtatcatgaaacttccaaaacatgaggatgatttcatccaattagtt  5341900  Previous    Next  AGI:  At3g15770.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25360.1); similar to unknown [Populus trichocarpa] (GB:ABK94402.1) Range:  from: 5340105    to: 5341346    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g15780.1    Description:  unknown protein Range:  from: 5341433    to: 5342564    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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