Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------AtLEC2                                 <---------At4g35610      --------->ARR14(1)                                 --------->At4g35610     <---------ARR11(3)                               <---------ZAT14           <---------ARR14(2)                          ----------------------->TaNAC69(2)                         --------->YAB1                  --------->ARR11(3)                         <---------ICU4                  --------->ARR14(2)                         -------->ATHB1                  <---------GLK1(2)                         --------->ATHB12               --------->HSFB2a(1)                        <---------YAB1                  <---------HSFB2a(1)                        --------->ICU4                  --------->HSFC1(2)                        <---------ATHB12                <---------HSFC1(2)                  <---------YAB1--------->ANAC46       ----------->ARR10            --------->AHL20(2) --------->ZAT18    ---------->DOF2            <---------AHL20(2) --------->SPL7 --------->TOE2(3)                <---------DAG2 ----------DOF2<---------YAB1<---------SPL7<----------DOF2--------->GLK1(2)    <----------DOF2    <--   ttctttttaagagttttattattctaatcattgtacgctgcatgtctttcttaaaagaagattctcttctcaatttcatcgctttatacatgagttgcta  5316500                                            --------->KAN4(2)                                           <----------TaMYB80                                          <---------ARR14(2)                                     <---------At5g28300                    <-----------RAV1(1)   ---------->TaMYB80       <------------------------ANAC81    --------->ARR14(2)                    <---------DAG2  <----------DOF2 <----------DOF2   <-----------GT1         ----------->GT1     <----------DOF2 --------DOF2 ---------->ID1   <---------DAG2   <---------YAB1    <---------AHL20(1)         --------   ctttctttttgtttttgtttctttgttgtccagccttttcaccgtatattcttatagctagactgtaatatacttactatcactttttagtagacataat  5316600                                      --------->AHL20(2)                                 --------->YAB1        --------->LBD16                              <---------ICU4          --------->ANAC46                              --------->YAB1        --------->ANAC58                             --------->ICU4         --------->ANAC58                          <---------ATHB51        <---------ALFIN1                          --------->ICU4          --------->ANAC46                          <---------ATHB12      <---------ALFIN1                      <---------ZAT14 <---------AHL20(2)    ------->TEIL ----------->HVH21    --------->AHL20(1) ->ICU4   ----------->HVH21--------->YAB1 <-----------GT1                                 <---------AHL20(2)   tctatcaacctagtgaccagtgactgcaataataatcaaattttttacaaacacacccccaaaattgtctaacttccaaactatctgaattttaaaatgc  5316700                                               --------->YAB1                               <--------ATHB1                               --------->TOE1(2)                                            ---------                   --------->GLK1(2)           --------->AHL20(2)                           ---------                  <---------ARR14(2)         --------->AHL20(2)                            <---------ATHB51         --------->AHL20(2)    --------->TOE2(3)                                           <---------ATHB12         <---------AHL20(2)    --------->TOE2(2)                                       <---------YAB1         --------->YAB1      ------->TEIL    --------->AHL20(1)                     <---------YAB1      --------->YAB1 --------->TOE2(3)      --------->YAB1  <---------ANAC58     ------->TEIL <------ZmHOX2a(1)<---------GLK1(2)     --------->AHL20(2)  <---------ANAC58  <---------ATHB12   ttaggagataataatatggagattcttaatcaacctaagaaataaaaaataatatttgatgttcttgtctgtatttccaaatgaatatgatcaataatgc  5316800                                                      <----------DOF2                                               <--------ATHB1                                               <---------ICU4                            --------->At4g35610--------->YAB1                            <---------At4g35610--------->ATHB51                                   <--                            <---------ZAT2    --------->ICU4                                      <--                     --------->DAG2           <---------ATHB51                                    <-- ->DOF2       ---------->DOF2        --------->MYB52(1)            ---------->DOF2            <------ >YAB1    <----------DOF2   --------->ZAT2    <---------ATHB12  <----------DOF2      ---------->DOF2   aaaaacaattctcttttaaagaaaaattggagctgagagtaagggccaataatgggcttatatgggctataaaggcccaaatgaaacaaaagttgaagtt  5316900                                                          ------->GAMYB                                                        ------>MYB83                                                        ------>MYB46(1)                                                       --------->MYB52(1)                                                      --------->TOE2(2)                                                      ------->GAMYB                                                      --------->AtMYB61                                                      --------->TOE1(2)                                                     <---------MYB52(2)                                                     --------->MYB46(3)                                                     <---------MYB55(2)                                                     --------->DEAR3(2)                                                    ------>MYB46(1)                                                    -------->P                                                    ------>MYB83                                                    --------->ANAC58              <---------YAB1                                                    --------->ANAC58          --------->ARR11(3)                                                   ------>MYB46(1)            --------->AHL20(1)         --------->ZAT14                        *TSS--------->ANAC46   --------->TOE2(3) -------ANAC58          --------------------->WRI1 ------>MYB83    --------->WRKY38(1) -------ANAC58       --------->AtMYB61          --------->ANAC58  <-----------HVH21--------->ATHB12 -------ANAC46       <---------ALFIN1           --------->ANAC58  --------->DOF5.7(2)          <----- ---HSFC1(2)      --------->ANAC46      --------->TOE1(2)--------->MYB46(3)   <---------AHL20(1)  ---   tcgtgcttcgctgtacaaagacaccactctggttgtatcgaacgagcgaaacccaaccaacgacgagcgttcacctcaaatattttgatttgatcaaatc  5317000                                                 <---------At4g35610        --------->ANAC58                         --------->At4g35610        --------->ANAC58                         --------->ZAT2                                   <--        --------->ANAC46                <---------DOF5.7(2)                                       <--    <---------ALFIN1      ------>ZmHOX2a(1)  --------->ARR14(2)                                ------   --------->ZAT14       --------------------->WRI1                       ------>ZmHOX2a(1)    <-----  <---------ALFIN1    <---------ZAT18 --------->DOF5.7(2)  --------->TOE2(3)               --------->HSFB2a(2) ----ATHB12    <---------ATHB12  <---------CCA1(2)       --------->ARR11(3)                <---------HSFB2a(2) ------>At4g35610 <---------MYB52(1) --------->TOE2(3)   <---------ARR11(3)                --------->HSFC1(1)   atctccacactcgccaaatcgttgtgtcctcgttcatatcgttatcgtatcagctcaaaaatctcaatctctcttccttacattcttctgtttctcgaat  5317100                                                                                 --------->ANAC46                                                                               --------->ZAT6                                                                              <---------ZAT18                                                                              --------->ZAT14                                                                              --------->SPL7                                                                              --------->ZAT18                                                                              <---------ZAT14                                                                            <---------SPL7                                                     <---------ANAC58      ==========================  ---------->ARF1                                    <---------ANAC46      ------>ZmHOX2a(2)  ---------->ID1                                 <---------ANAC58         --------------->AtSPL8 -------ANAC58                                   <---------ANAC58         <---------------AtSPL8  --- -------ANAC58      ------>ZmHOX2a(1) <---------CCA1(2)            <---------ANAC58      <---------ANAC58 --->ARR14(2)  <---------ANAC58   ----------->RAV1(2)<---------ANAC58     --------------->AtSPL3  <-- ----ARR14(2)  <---------ANAC58  -------->P  ---------->ID1        <---------ANAC58      <---------ANAC58   ccttgtctccctccatggcttcctgtaagtttctctacctgtctcttgttgtcttgcttgttccagttttcttgggatcgtacactaaattgggtttgtg  5317200                                  --------->At4g35610                                        --------                                  <---------At4g35610                                       <--------                          <---------TOE2(2)                                                <---------WOX13(1)                          <---------TOE1(2)                                               <---------ANAC58                       <---------ANAC58                                       --------->GLK1(2)  ------>ZmHOX2a(1)    <---------ANAC46                                      <---------ARR14(2) --------->TOE2(3)     <---------ANAC58                                      <---------GLK1(2) ========HOX2a_HOX2a<----------DOF2                         --------->DAG2   --------->ARR14(2) ------>ARR14(2)   <---------ANAC58                 <-------TEIL      <----------DOF2     <---------ANAC58 -------ARR14(2)   <---------ANAC58            --------->YAB1   ----------->GT1  <---------YAB1   <--   tttcctcattcaaatttgaatgctttcgtagttttctgctctcatagaatcatattcatcgaaaggttgtaactttggggattctgtttattgagtgata  5317300                                                              <---------TOE2(3)                                                             ---------->DOF2                                                           ------>ZmHOX2a(2)                                                          --------->CCA1(2)                                                          <------ZmHOX2a(2)                                                         --------->ARR11(3)                                                         >>>>>>>>>GATA-1                                                         --------->AGP1                                    <-------TEIL         <---------ARR11(3)          <---------ARR11(3)                                 <------MYB83            >>>>>>>>>GATA-3             --------->GLK1(2) ->ATHB12                        <------MYB46(1)         >>>>>>>>>GATA-4             --------->ARR14(2) -ZAT6  ---------->DOF2         <---------TOE2(3)        >>>>>>>>>GATA-2             <---------ARR14(2) ----ZmHOX2a(1) <---------MYB59 --------->MYB59 --------->AHL20(2)      --------->GLK1(2)           <   ggaaaactcagaaagggacttaactttgaacaattaggttgattttggtataaattagagatctaaagttgaagaatttgtcttcagtatctgtttcaat  5317400  Previous    Next  AGI:  At3g15680.1    Description:  zinc finger (Ran-binding) family protein. similar to zinc finger (Ran-binding) family protein [Arabidopsis thaliana] (TAIR:AT5G25490.1); similar to zinc finger protein-like protein [Gossypium hirsutum] (GB:AAZ94630.1); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876) Range:  from: 5315008    to: 5316473    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g15690.1    Description:  biotin carboxyl carrier protein of acetyl-CoA carboxylase-related. similar to biotin/lipoyl attachment domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G52670.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68457.1); contains InterPro domain Single hybrid motif (InterPro:IPR011053) Range:  from: 5316948    to: 5319615    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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