Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->ANAC58                                                       <---------ANAC55(2)                                                       --------->ANAC46                                                       ================================MYC_MYB                                                       --------->ANAC55(1)                                                       --------->ANAC55(2)                    <------                                                       --------->ANAC58                       -------                                                       <---------TGA1a                     --------->YAB1                                                       <---------O2             --------->MYB52(1)                                                       --------->O2            ------->GAMYB  <------      --------------->AGL15                            --------->TGA1a        <---------MYB52(2)     <-----------------AGL3                            --------->bZIP60(1)    --------->MYB46(3) ---- -----ICU4                      --------->ANAC55(2)    ========================================bZIP_DOF ----YAB1                       --------->ANAC46 --------->ANAC58            <---------At4g35610 ---- ->YAB1                <-------TEIL              --------->ANAC58      --------->LBD16   --------->GLK1(2) -YAB1<---------------AGL15   <-----------GT1   --------->SPL7       <---------LBD16---------->DOF2   aataccatcttctattggaaacaaattcattttcacataattcaaaaccatacgctcacgtaactatctaatccggttcaactaacaaaagaatcagaac  5309200                                                                     --------->TOE2(3)          <---------AHL20(2)                                       <---------ATHB12   ----------->GT1                                     <----------DOF2     --------->CCA1(2) ---GLK1(2)---------->DOF2                             <---------------AGL15  --------->TOE2(3) -->ARR14(2)                                           ============================================== ---ARR14(2)                                           --------------->AGL15<-------TEIL ----->TOE1(3)             --------->ANAC55(2)----------->GT1      --------->ICU4           --------- ----->TOE2(3)       --------->ICU4         ---------->DOF2    <---------At4g35610<---------YAB1-----   ctcaaatgttatataaaggagcaatttttaagtgattcaagatgggaaaagagaaaactttattgagcaaacattagatacatcaaaattgagtaaaagg  5309300                                                                                    <---------ALFIN1                                                                                   <------NtERF2                                                                                  ------>NtERF2                                                                                  <---------RAP2.6(3)                                                                                 --------->RAP2.6(2)                                                                                 --------->DEAR3(1)                                                                                 --------->RAP2.3(2)                       --------->HSFB2a(2)                                       --------->ANAC46                       <---------HSFB2a(2)                                       --------->RAP2.3(3)                 ------>MYB83                                                   --------->ERF1                 --------->ARR14(2)                                             --------->RAP2.3(1)                 ------>MYB46(1)                                  <---------At4g35610                 <---------ARR14(2)                               --------->At4g35610              --------->MYB46(3)                      <---------------AGL15     --------->ATERF1(1)        --------->GLK1(2)                             ==============================MADS_MADS        <-----------ARR10                         <---------ARR14(2)--------------->AGL15        ---- <---------YAB1 --------->WOX13(1)  <----------DOF2   <----------DOF2          --------->At4g35610 =====================================================================MADS_MADS<---------ATERF1(1)  < ->DOF2<---------GLK1(2)  <<<<<<<ZML2   <---------TOE2(3)--------->YAB1  ---------->DOF2         ---- ------>GT1 <-----------GT1   --------->MYB52(1)  --------->GLK1(2) <---------------AGL15        ----   gttatgagagaatctaaccaatctgctagaacgaacagctttgagattagcgattccttttataagtctgctcgataaagaagccgccatctctaaatca  5309400                        <---------MYB52(1)          ---------->DOF2   <---------GLK1(1)    <---------ARR14(2)    <---------HSFC1(1)                                  <--   --------->GLK1(1)    --------->ARR14(2)    --------->HSFC1(1)                                  <--  <---------ARR14(2)--------->LBD16           <---------HSFB2a(2)                              ------  --------->ARR14(2)<<<<<<<<<<AtSR1           --------->HSFB2a(2)                             ------- ----->ANAC46       <---------LBD16    --------->GLK1(2)                     ---------->DOF2  <------ ---------TOE2(2)  <---------ANAC46   <---------GLK1(1)                ----------->GT1       -------- ----->ANAC58     <---------LBD16  --------->YAB1                    ----------->GT1         -------- ----->ANAC58 --------->ALFIN1 <---------AHL20(2)                 <------ZmHOX2a(1)         <--------P   cgcagatttcttcaaagtgttccgcggttttgtttaatcgaaatctgtctagaaaactatcaagaacaggaatgagaaaaaaagattagagagggtagct  5309500                         <----------DOF2                        ------>ZmHOX2a(2)                       <---------RVE1(1)         ======================HOX2a_HOX2a         =====================HOX2a_HOX2a         <------ZmHOX2a(1)                                        ------>MYB83  <-----------HVH21  <------ZmHOX2a(1)    <------ZmHOX2a(2)                          ------>MYB46(1)  =============================HOX2a_HOX2a                      --------->DEAR3(1)  ============================HOX2a_HOX2a                       <---------MYB59<---------O2 -------TOE1(1)       --------->ARR11(3)                        --------->MYB46(3)<---------ANAC46 -------TOE2(1)       <---------ARR11(3)                        *TSS  --------->LBD16 --->TOE1(2)          --------->AGP1        <----------DOF2     ----------->HVH21 <---------ANAC58 -->At4g35610        <---------GLK1(1) ------>NtERF2           --------->DEAR3(2) <---------ANAC58 ---At4g35610  <---------ZAT2        ----------->HVH21      ----------->HVH21  --------->bZIP60(1) ->MYB111(1)   --------->ZAT2    <-----------HVH21   --------->At4g35610       --------->O2   ------- --->ARR10 <---------DEAR3(1)   <-----------RAV1(1)  <---------At4g35610       <---------bZIP60(1)  -   acgaggaagaaggacggagctagagatctttacaatgtcgcgaccgcttctcttcatctccagtgaccgacccagagaacgacgtcgtgtcattactcat  5309600                                                       --------->O2                                                       <---------O2                                                      ----------->STF1                                                     <---------DOF5.7(2)                                                    ----------->HVH21                                                    --------->WRKY12                                                   <---------MYB52(1)                                                   --------->DOF5.7(2)    <------MYB83                                                  <---------At4g35610--------->AHL20(2)                                                  <-------GAMYB     <---------AHL20(1)                                                  --------->At4g35610<---------AHL20(2)                                                 --------->MYB52(2) <---------AHL20(2)                                                 <---------MYB46(3) --------->AHL20(1)       ----------->GT1        <------MYB83      <-------TEIL        --------->AHL20(2)      <---------ARR11(3)      <------MYB46(1)--------->ANAC46   <---------AHL20(2)      --------->ARR11(3) <---------ANAC46 --------->ARR14(2)    --------->AHL20(2)                <-- -->YAB1            <---------ANAC58      <---------ARR14(2)----------->GT1                     <---- -------->TOE1(3)   <---------ANAC58 ---------->DOF2--------->WRKY38(1)   <------MYB46(1)   ---------   aaccctaagatgttatacgatgtcgtttcggatggtcaccaaagtatacgtccgttgacgtcttgataaatttatttggtttgctcggtttagataaatt  5309700                                            <---------AHL20(2)                                       ------>ZmHOX2a(2)        <---------AHL20(2)            <------ZmHOX2a(2)       <---------AHL20(1)            <---------AGP1       <---------AHL20(2)            --------->ARR11(3)          --------->TOE2(3)       --------->AHL20(2)            <---------ARR11(3)         ----------->GT1   <---------AHL20(2)                --------->AGP1             <---------ANAC55(2) -------YAB1                         <---------ARR14(2)  ----------->GT1 -------GT1              <---------------AGL15          <-------TEIL---------->DOF2                <- >AHL20(2)               --------------->AGL15     <---------------------WRI1         <---------AHL20(2)   actattcaatttttttggtttacttctctcattttagtagatctatgaaattgaacgattcgtaaaacgtaaaagcagacacaaatgttttattgaaatt  5309800                                                                                         <---------ZAT18                                                                                         --------->ZAT18                                                                                --------->TOE1(2)                                                                              ------>MYB83                                                 <---------ARR11(3)           ------>MYB46(1)                                                 --------->ARR14(2)<---------ANAC58     --------->ALFIN1        --------->ARR11(3)                      <---------CCA1(2)  <---------ANAC58--------->ANAC46    ---------->DOF2             <---------MYB52(1)          --------->YAB1   ----------->RAV1(1) --------YAB1        ----------->GT1        --------->At4g35610  <---------YAB1 --------->TOE2(2) <--   tttgataaaagaaattgaaagattagtaaaacccgtttggattagcagctatatctgtataatgctaatgcttgatgaccaacatacgaagtggaccatg  5309900                   --------->YAB1            ============================MADS_MADS            <---------------AGL15            --------------->AGL15                                  <-----------ARR10           <------------MYB.PH3(1)                             <------ZmHOX2a(2)         <-----------GT1<---------------AGL15                <------ZmHOX2a(1)      ----------->GT1      --------->YAB1   ----------------->AGL2           <-----------GT1           <---------ANAC46 -------ANAC46     ----------->GT1                   <---------REM1(1)      --------->ATHB12        <   atgtgtattaataactgtttattgtaacaaaaatagaaatttgagaacacataagttgtaacaggatcaaatctaaacttattggctggaaattagaagt  5310000                   --------->ANAC58      --------->TOE2(3)          <-----------TGA1               --------->TOE1(3)                                          -          <-----------HVH21              --------->YAB1                                            <-         --------->ANAC46         --------->MYB46(3)                                               <-         --------->DEAR3(1) ----------->RAV1(2)                                                    <-       <---------At5g28300  --------->At4g35610                                                    <-     <------ZmHOX2a(2)      <---------ZAT2                                                         --    <---------ARR11(3)      <---------At4g35610 ---------->DOF2                                    <-   <------ZmHOX2a(1)        --------->ZAT2  ---------->DOF2------->GAMYB                          --- --------->LBD16   --------->ANAC46  --------->MYB46(3) --------->MYB52(1)                ---------->DOF2 ---------LBD16    --------->ANAC58--------->AtMYB61 --------->ANAC46            --------->ANAC46 ---   ctccaggatcaccgtcacaacaagaaacacagctgaaccacaaccataaagaaagacacaacggaaattacaaaaacacaaacacaaaactcaaaagacc  5310100  Previous    Next  AGI:  At3g15660.1    Description:  glutaredoxin family protein. Identical to Monothiol glutaredoxin-S15 (GRXS15) [Arabidopsis Thaliana] (GB:Q8LBK6;GB:Q9LW13); similar to thioredoxin family protein [Arabidopsis thaliana] (TAIR:AT4G04950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46047.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Glutaredoxin-related protein (InterPro:IPR004480) Range:  from: 5307951    to: 5309564    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g15670.1    Description:  late embryogenesis abundant protein, putative / LEA protein, putative. similar to late embryogenesis abundant protein, putative / LEA protein, putative [Arabidopsis thaliana] (TAIR:AT1G52690.1); similar to late embryogenesis abundant protein, putative / LEA protein, putative [Arabidopsis thaliana] (TAIR:AT1G52690.2); similar to late embryogenesis-abundant protein [Brassica napus] (GB:BAB88877.1); contains domain PTHR23241 (PTHR23241) Range:  from: 5309893    to: 5310995    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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