Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        <------ZmHOX2a(2)                                                                                     --------->ARR14(2)                                                                             --------->LBD16                                                                            --------->ANAC55(2)                                                                            <---------ANAC55(2)                                                                            <---------ANAC58                                                                            <---------ANAC58                                                                      <---------HSFB2a(2)                                                                     <---------LBD16 <---------ARR14(2)                                                                <---------ICU4----------->HVH21                                                               <---------YAB1<-----------HVH21                                                         --------->ATHB12   <---------ANAC55(1)                                                         -------->ATHB1    ------>ZmHOX2a(2)               <---------YAB1                            --------->ATHB51 <------ZmHOX2a(2)        ---------->DOF2                                 <---------ATHB51 --------->ARR14(2) ---->YAB1----------->GT1                               --------->ICU4--------->HSFB2a(2)           < ----YAB1--------->DAG2      ---------->DOF2         ------------>ATHB5  <---------ARR14(2)<---------MYB52(1)   atcgtaaacaaaaagttattcttcatcccataaaagagagacattttaagttcgacgaattattgattatttctggatccgtgacccgatccagttactt  5297200                                                                                         <---------ZAT2               --------->ANAC58                                                          --------->ZAT2               --------->ANAC46                                                     <---------LBD16               --------->TGA1a                                                     ------>ZmHOX2a(1)               <---------TGA1a                                              <-------GAMYB--------->At4g35610               --------->ANAC58                 --------->MYB52(1)         <---------MYB46(3)           <-----------RAV1(2)          <---------------AtSPL8             <---------DEAR3(2)         <-----------HVH21       ------>ZmHOX2a(2)                        <---------DEAR3(1)---------        --------->ANAC58        <------ZmHOX2a(2)    <---------ANAC46  <---------DEAR3(1)<---------At4g35610        --------->ANAC58    ------>NtERF2    <---------ANAC55(2)   --------->HSFB2a(1) <-----------RAV1(2)       ------->TEIL        --------->ANAC58  --------->ANAC55(2)   <---------HSFB2a(1)--------->LBD16       --------->SPL7      --------->ANAC58 <-------TEIL           <---------HSFC1(2) <---------At4g35610 ---------WRKY18(1)     ----------->HVH21----------->GT1           --------->HSFC1(2)--------->ANAC46   cttgacccgaacgtcagacgcgagtcgcgacgcgatcgcagaatggtacataacgtcgtggaatgtagaagcttcggcggttttcctccgcagctgctta  5297300                                                                  <---------LBD16                                                    ------>ZmHOX2a(2)                                                   --------->CCA1(2)                                                   <------ZmHOX2a(2)                                                  <---------ARR11(3)                                                  --------->AGP1 <-----------GT1             --------                                                  <---------AGP1<-------TEIL   <---------ANAC55(2)                                                  --------->ARR14(2)           --------->ANAC55(2)                                                  --------->ARR11(3)           --------->bZIP60(1)  -                                                  <-----------ARR10           <---------TOE2(3)     -                                                  <---------ARR14(2)          ----------->STF1      -         <-----------HVH21               <---------DAG2        --------->CCA1(2)             <-------         --------->LBD16                 <----------DOF2      <---------ARR14(2)         --------->ARR14(2)        <---------ANAC46               --------->At4g35610    --------->ARR14(2) --------->TGA2(2)<--      ------>ZmHOX2a(1)                <---------At4g35610    <---------GLK1(2)--------->ANAC46------ >At4g35610                      <----------DOF2 <---------CCA1(2)<---------At5g28300    <---------ARR14(2)   gccttctcctccgtgagacaacatcgcagagacctcttttcagctttatccagatctgattccagattcacggttttgttgacgtaatcaggttccgatg  5297400       --------->DAG2      ---------->DOF2                                                                         <------   <---------------AGL15                                    <---------ARR14(2)     <------ZmHOX2a(1)   --------------->AGL15                                 ------>ZmHOX2a(2)     ======================  ----------------->AGL1       --------->ANAC58          =================================HOX2a_HOX2a  ----------------->AGL2    --------->DEAR3(1)          ==================================HOX2a_HOX2a  ----------------->AGL3    --------->TOE1(2)           <------ZmHOX2a(2)      ------>ZmHOX2a(2) ->At4g35610   --------->ATERF1(1)         <---------ANAC58 --------->ARR14(2)======================= -------->ANAC58           --------->DEAR3(2)          <---------ARR14(2)     <------ZmHOX2a(2) -------->AtLEC2--------->DEAR3(1)         <---------ANAC58 <---------GLK1(2)<---------ARR14(2)   <-- -------->ANAC58--------->ZAT18--------->ANAC58        --------->ARR14(2)    --------->ARR14(2)<----- --At4g35610  --------->PCF2--------->TOE2(2)  --------->ANAC55(2)       <---------LBD16      ------- -------bZIP60(2)          --------->MYB46(3)  <---------ANAC58     <---------At4g35610  --------->At4g35610 ----->HVH21<------ZmHOX2a(1)  --------->ANAC46<---------ANAC58    ----------->ARR10---------->DOF2   acatgccaaaaagaggagcccaccatgaaaccgacgaaacaggtttcttacgggctggatccgattcggaagatgctcggatcgaggaaagagcggagca  5297500                    <------MYB46(1)   --------->ATHB12 <------MYB83  <---------YAB1    ----------->GT1  --------->ICU4    <---------ANAC55(2) ---ZAT2           --------->MYB59 --------->At4g35610                                 ----------->GT1 ====HOX2a_HOX2a   --------->MYB46(2)                           <------ZmHOX2a(1)   --------->ARR14(2) ====HOX2a_HOX2a   --------->MYB111(1)            ---------->DOF2                   <---------ARR14(2) ----ZmHOX2a(1)   <---------MYB55(1)       ---------->DOF2    <---------TOE2(3)    <------ZmHOX2a(1) ------RAV1(2)   <---------MYB52(1)<---------At4g35610    <----------DOF2        <---------TOE2(3) -->ZAT2  >>>>>>>>>>>>>>>>>LFY <-------GAMYB  --------->At4g35610                <---------TOE1(3)   ggagatgattgtagccattgttaggtaaaatgtggttatctgagagaaagctcaaagctgtttttaggaagaagagaaagattaaggatttgtaaatttt  5297600                                           --------->ZAT2 ----------->GT1        --------->MYB52(2)                                           <---------At4g35610               <---------KAN4(1)                                           --------->At4g35610               <---------HSFC1(2)                                 <---------ANAC46      --------->ALFIN1      --------->HSFC1(2)                                <---------TOE2(3)      <---------ANAC46      <---------HSFB2a(1)                           <---------RVE1(1)         <---------ANAC58        --------->KAN4(1)                           <---------CCA1(1)         <---------ANAC46        --------->HSFB2a(1)                  <---------ARR14(2)       <---------ZAT2<---------AtMYB61  <---------KAN4(2)       ---------->DOF2    <---------ARR11(3)         <---------ANAC58 <---------ANAC46<-----------GT1      *TSS        --------->ARR14(2)     <-----------RAV1(2)    <---------YAB1  <-------TEIL    <---------TOE2(3)     --------->ARR11(3)    <----------DOF2<-----------TBP--------->KAN4(2)   tggattaagaaaagaaaatggatatgtagatatttaggtggaatcagctgctatgcggtgtggttttttatagtgtggaatgttcgtttcactggttttt  5297700                                               <---------ZAT14                                               --------->ZAT14              --------->ZAT14                                 ----------->GT1                            <---------ZAT14 <--------                          <---------ZAT18      <---------ZAT18              <---------ZAT18 ---------                          --------->ZAT18<---------ANAC58        --------->ALFIN1      <---------YAB1               <---------LBD16   ------->GAMYB --------->ZAT18 <---------ANAC46      ----------->GT1<     --------->MYB52(1)  --------->ALFIN1<---------ANAC58    <---------ZAT14--------->ZAT18<---------AHL20(2)  --------->ANAC46 ---------->DOF2--------->At5g28300<---------YAB1  <---------At4g35610   --------->AHL20(2)   atcaacgtaagggtattttcggaaagagtgtgcaacggtaaatgcgttgtgcactacgataagtacggtggagatgagagcactggattataaaaaaatt  5297800                                                                           <---------ICU4                                                                           --------->AHL20(2)                                                                           <---------AHL20(2)                          <---------At4g35610                              --------->ATHB12                          --------->ZAT2                                   --------->ATHB51                          <---------ZAT2                                  --------->ICU4                      --------->ALFIN1                                  --------->YAB1     <---------RVE1(1)                      <------NtERF2                                    <---------AHL20(2)  <---------CCA1(1)                    <---------ANAC58                             ---------->ID1           --------->ARR11(3)                    <---------ANAC46                          <---------DAG2       --------->ATHB12 -AHL20(2)<---------TOE2(3)                     <---------ARR11(3)     --------->AHL20(2) <---------ARR11(3) >AHL20(2)<---------YAB1  --------->At4g35610   --------->ARR11(3)   <----------DOF2     <------ZmHOX2a(1) ------ZmHOX2a(1)   <---------ANAC58     <-----------HVH21    <----------DOF2  <---------MYB46(3)   taggagatggataagattgaaggcgtggagcagcgttgccaattgtcaaatgtcttcgtcttcacttttcgctttaattatttgttgattaggatatttt  5297900                                                            --------->ATHB12                                                       --------->ZAT18                                                       <---------ZAT18                                                       --------->ZAT14                                                    <---------ANAC58                                                    <---------bZIP60(2)                                                    <---------ANAC46                            -----                            ---------->ID1          <---------ANAC55(2)                        ------                        <---------ANAC58            <---------ANAC55(1)                     ---------                        <---------ANAC58            <---------ANAC58                       --------->KAN4(1)                        <---------ANAC46            <---------O2                           <---------HSFB2a(1)                     ----------->HVH21              <---------TGA1a                        --------->HSFB2a(1)                   <---------ANAC58                 --------->O2                           <---------                   <---------ANAC58                ----------->STF1                        <---------KAN4(1)               <---------ANAC46          <---------ARR11(3)--------->ICU4                 ---------->TaMYB80               <---------ANAC58 ==============================bZIP_DOF                <---------TOE2(3)               <---------ANAC58 <----------DOF2  ----------->TGA1                  <---------YAB1        <-----------GT1 <---------bZIP60(2)    <---------ICU4            <---------ZAT6   <---------KAN4(2)   tgtttggattttacattgcttgtgtgacttgtcgctttgacaatatccaaaatgacgtgtactcattggaaaatagagttcaactattatggaatattct  5298000                <---------DEAR3(2)        --------->KAN4(1)        <---------KAN4(1)       <---------ARR11(3)                                                  <        --------->ICU4          --------->ARR11(3)                                                  <       <---------KAN4(2)       <---------CCA1(2)        ----------->GT1                 ----------->GT1     <------ZmHOX2a(1)    <-----------GT1               --------->ANAC46               --------->ANAC58 ---------->AGL15   <---------ARR11(3)                  <---------ANAC55(2)            --------->ANAC46 --->TOE2(3)   <---------At1g77200                      --------->ANAC55(2)            --------->ANAC58 >KAN4(2)      <---------DEAR3(1)    <----------DOF2    --------->ANAC55(1)  <----------DOF2      --- -TaMYB80--------->YAB1   >>>>>>>>>>WRKY63    ------->TEIL         <-----------HVH21 --------->MYB52(1)   taaatcaggaataatcgtcggtgatatttgactatatctctttcaacgtatttcgaactcgtaacaaaatgtcagtcttcttttatcaaacggcaaaatg  5298100  Previous    Next  AGI:  At3g15630.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G52720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46032.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71657.1) Range:  from: 5296854    to: 5297606    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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