Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->AHL20(2)                                                        --------->ZAT6       --------------->AGL15                            <-----------GT1       <---------------AGL15                          <-----------GT1       ------>ZmHOX2a(1)                          <---------AHL20(2)                                <       =============================================================================================MADS_MADS      ----------------->AGL2                     <---------AHL20(2)                                 - ----------GT1                                <---------AHL20(2)                                    - ----->KAN4(2)                                --------->AHL20(2)                    <---------------AGL15 --AHL20(2)                                  <---------AHL20(2)    <-----------GT1------->TEIL  ----- >AHL20(2)         --------->AtLEC2<---------ZAT14--------->AHL20(2)  --------->AHL20(2)       ------   attcccatcctcttattagaaatgcaaacaaatagactatagttttatttatttattttcactataaaataactaaataacatgaacttattgaagaaaa  5263600                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                      <-------TEIL                                                                                     --------->ARR14(1)                                                                                     --------->GLK1(2)                                                                                     --------->CCA1(2)                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                                    <---------GLK1(2)                                                                                    --------->ARR11(1)                                                                                   <---------HSFB2a(1)                                                                                   <---------GLK1(1) ---------ZAT14                             <---------ICU4                        ----------->ARR10 -------->ZAT14                           <---------ARR11(3)                     <------ZmHOX2a(1)--- -------->ZAT18                           --------->ARR11(3)                     ==================== ---->DAG2     --------->GLK1(2)          --------->GLK1(2)    <-------MYC3<------ZmHOX2a(1)     <--- ---->DOF2  <---------YAB1               <---------GLK1(2)     ------->MYC3==========================   agtatactatagttgtgattctgtgatatactagttagaacaagaatctttacaaaaaaaaaacacatgggatgttaggagaaggagattcggattccaa  5263700                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                             --------->ARR14(2)                                             <---------ARR11(3)                                             --------->ARR11(3)         <---------WRKY12                    <---------AGP1       <-----------HVH21                     <-----------ARR10      ------->GAMYB                          <---------ARR14(2)     --------->MYB46(3)                      --------->GLK1(2)   --------->MYB52(1)                       <------ZmHOX2a(1) ------>ZmHOX2a(2)                        --------->SPL7                            <---------AHL20(2) --------->MYB46(3)                     --------->TOE1(2)   ------->GAMYB          <---------AHL20(2) ------>YAB1                           ------->GAMYB        <---------ALFIN1       --------->AHL20(2) =======HOX2a_HOX2a              <-----------GT1      --------->TOE1(3)        --------->ICU4 ------ATHB12         --------->At4g35610 <---------TOE1(2)--------->MYB46(3) <----------DOF2       - =======HOX2a_HOX2a --------->YAB1 --------->MYB46(3) --------->TOE2(3)    <---------MYB52(1)   -----   tgatccaacggtcagagaaaaatcagaagaaaatttcacaaccgtaggatctgttcccttaaccaccttgtaatgccggtctttattaattttgagaaaa  5263800                                       <---------ALFIN1                                       --------->AtMYB61                                      --------->MYB46(3)                                      <---------MYB55(2)              ------>MYB46(1)        ------>MYB46(1)            --------->MYB46(3)       ------>MYB83   --------->At4g35610            <---------MYB111(2)     --------->ORA47(1)----------->HVH21            <---------MYB111(1)    --------->MYB46(3) --------->WRKY38(1)            --------->AtMYB61      --------->DEAR3(1) --------->WRKY12    <----------DOF2            <---------MYB46(2)    --------->DEAR3(2)<---------At4g35610<---------ALFIN1            <---------MYB59    ----------->HVH21 ------>ZmHOX2a(1)    <------NtERF2   --------->ANAC46           --------->ANAC58  <---------O2 --------->DEAR3(1)         ------>NtERF2    --------->ANAC58           --------->ANAC58  <---------TGA1a <---------ARR14(2)     --------->RAP2.3(3)        --------->At4g35610  --------->ANAC55(2)--------->TOE2(3)   --------->PCF2    --------->ANAC58 -------->AHL20(2)           --------->O2--------->ANAC46   <-----------HVH21       <---------ALFIN1 ---->AHL20(2)------>MYB83   --------->TGA1a --------->ARR14(2)   ------>NtERF2     ----------->RAV1(1)   aaataaaaacagcaccaaacttatgtctctcatgtgaccgaccaccgcatcctcagttgacctgtctctgcccccactttgtctccccacacaaactgaa  5263900                                     <-------MYC2                                     ------->MYC3                                     ------->MYC2                                     <-------MYC3                                     <-------PIF5                                     --------->ANAC58                                     ------->MYC4                                     --------->ANAC58                                     <-------MYC4               <---------ANAC58  ------>MYB46(1)                                     ------->PIF5               <---------ANAC58  ------>MYB83                                    <---------TGA1a             <---------ANAC46--------->TOE1(2)                                    --------->TGA1a  <------MYB46(1)           --------->DEAR3(2)                                    <---------O2     <------MYB83              --------->MYB46(3)                                    --------->ANAC46<---------AtMYB61       --------->ZAT18                                    --------->O2   <---------WOX13(1)  <---------ANAC46                            <---------ATHB12 <------------CBF  <---------MYB46(3)--------->MYB52(1)                    <---------ARR11(3)   --------->ETT(2)   <------------CBF--------->WRKY38(1)                   <<<<<<<<<RAP2.2  --------->ANAC55(2)    --------->ATHB12--------->ALFIN1        --               ===============================bZIP_DOF    <---------YAB1 <---------ANAC46         ---               <----------DOF2    <---------ALFIN1<------------CBF     <---------ANAC58        ------       >>>>>>>>>TBF1--------->ARR11(3)--------->ALFIN1 <<<<<<<<<MYB2   <---------ANAC58  ----------->RAV1(1)   taacaagaagaagaagactttagatatcaaatgactccacgtgtcgatattggattggttttcattggttgtatcgtgtggaccaacgaagcaacatata  5264000                  <---------ICU4                 --------->ICU4              <------NtERF2                                   <---------ICU4         <---------DEAR3(1)                       --------->ARR11(3)         --------->ALFIN1                         <---------ARR11(3)        ------>NtERF2                           <---------HSFC1(2)    --------->ANAC58    --------->YAB1          --------->HSFB2a(1)    ----------->HVH21 ------------>CBF          <---------HSFB2a(1)    --------->ANAC46 --------------->AGL15      --------->HSFC1(2)                                 --    --------->ANAC58 <---------------AGL15    ---------->DOF2 --------->ATHB51                     -- ------->DAG2--------->ABI4(2)          <------ZmHOX2a(1)    <---------YAB1             ---------->DOF2 ------->DOF2------>NtERF2         --------->ALFIN1          --------->ICU4        <------ZmHOX2a(1) ----->TBP<---------ATERF1(1)  *TSS<---------REM1(1)       --------->YAB1         ----------->GT1  --   aaaagcacgacgcggtgccattactacaataagagaagtgtaggagaagaaagttctcatttcataattgtatcaaattgtgagaggaaaaaaagaagtt  5264100                                                                 <---------O2                                                        <---------LBD16                                                        --------->LBD16                                                       <---------LBD16                                                       --------->HSFB2a(2)                                      <---------At4g35610        --------->ALFIN1                                      --------->At4g35610        <-----------RAV1(1)                                      <---------ZAT2   <---------ANAC46                                      --------->ZAT2  <---------LBD16                                <---------DOF5.7(2) <---------SPL7                                --------->MYB52(1) <---------ANAC58     <------NtERF2               - ------->ANAC46         <---------ANAC58      --------->ALFIN1   <---------bZIP60(2)               <- ------->ANAC58         <---------ANAC58  ----------->ARR10      <---------REM1(1)              <---- ------->ANAC58 <------ZmHOX2a(1)  ------->GAMYB   <---------ANAC58--------->ALFIN1            <-----   caagaaatggagaaggaaggactcgggcttgagataacggagctgagattggggcttccggggagagatgtggcagagaagatgatgaagaagagagctt  5264200                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                 <---                         <--------P                                                              <---                      --------->MYB55(2)                                                         ----                      <---------MYB46(3)                                                         <---                    <------NtERF2                                                                <---                   <---------SPL7                                                                ----               --------->O2                                                                      <---               --------->bZIP60(1)                                                              -----               <---------bZIP60(1)                                                              <----               <---------ANAC46                                                                 <----               <---------TGA2(1)                              <---------At4g35610               <----               <---------O2                             <---------DEAR3(2)                      -----               --------->TGA2(1)                      <------NtERF2                            ------               <---------bZIP60(2)                   ------>NtERF2 <---------AtMYB61     -------->HAHB4               >>>>>>>>>>HY5                        <---------DEAR3(1)                   <---------ICU4            ----------->TGA1                        --------->DEAR3(1)    <---------At4g35610  <-----         ------->TEIL<---------ANAC46               <---------ANAC46<---------MYB46(3)   <--------ATHB1    --------->At4g35610 <---------MYB52(1)         --------->RAP2.3(1)   <---------ANAC46--------->ATHB12 --------->LBD16   <-----------HVH21               --------->ATERF1(1)----------->TGA1  --------->ICU4 -------->ANAC46  <---------DEAR3(1) <---------YAB1<------NtERF2<-----------RAV1(1)     <---------YAB1 --------LBD16----------->STF1    <---------ZAT6  <---------RAP2.3(1) ----------->HVH21 <---------ATHB12 -------HVH21<---------TGA2(2)  --------->YAB1   <---------DEAR3(1)--------->ALFIN1    <---------TOE2(3) -----DOF2  ----------->HVH21  --------->ICU4---------->DOF2  ----------->RAV1(2) ----------->GT1<---   tcacggagatgaatatgacgtcgtcgggtagtaatagtgatcaatgtgaaagcggcgtcgtttcatctggtggtgacgctgagaaggttaatgattcgcc  5264300       --------->ANAC58       --------->ANAC58      --------->DAG2     ---------->DOF2 --------->RAP2.3(1) <------NtERF2 ---------DEAR4(2) ----->NtERF2 ---------ORA47(2) ---------ERF1 ---------ATERF1(1) ---------RAP2.3(1) --------RAP2.3(3) ------->ATERF1(2) ------->DEAR3(1) --------DEAR3(1) --------ATERF1(2)          <------NtERF2 --------RAP2.3(2)     <---------ATERF1(1) ----NtERF2 --------->O2 --------->ATERF1(1) ------>RAP2.3(1)     --------->ALFIN1 -------ABI4(1)     <---------ANAC58 ------>ATERF1(1)   <---------ANAC46 ------ERF1 --------->ZAT2 --------->MYB52(1) ------RAP2.3(1)    <---------bZIP60(2) -->NtERF2  <---------O2<------NtERF2 ------RAP2.6(1)    <---------ANAC58                               --------->HSFC1(2) ------DEAR4(2)    --------->ALFIN1                                --------->At4g35610 ----->LBD16<---------ZAT2 ------>NtERF2                           <---------ZAT2 ------ORA47(2)    <------NtERF2                                   <---------HSFC1(2) ---->DEAR3(1)<---------AtMYB61             --------->LBD16        <---------At4g35610     <---------TOE1(3) -----ATERF1(2)    <---------AtMYB61       --------->HSFB2a(2)     --------->HSFB2a(1)  <--------P -----DEAR3(1)--------->ALFIN1             <---------HSFB2a(2)     <---------HSFB2a(1) <-------GAMYB -----RAP2.3(2)  <---------ANAC46         <---------LBD16 <----------DOF2      ---------->DOF2 ---->ATERF1(2)<---------MYB46(3)        --------->MYB52(1)     <------ZmHOX2a(1)  --------->ALFIN1 --->ATERF1(1)<---------DEAR3(1)<---------MYB52(1)      <---------At4g35610  --------->ANAC58 ----LBD16<-----------RAV1(2)  <---------MYB52(1)       --------->ZAT2       --------->ANAC46       - ------ATERF1(1) --------->ALFIN1 <---------MYB46(3)    --------->At4g35610  --------->ANAC58     ---   ggcggcgaaaagccaggtggtggggtggccaccggtttgttcttaccggaagaaaaacagctgtaaggaagcttcgaccacgaaagtggggttagggtat  5264400                                          ------>ZmHOX2a(2)                                        ------->TEIL                      <---------ANAC46  <---------AGP1                      <----------DOF2   --------->ARR14(2)           ------>ZmHOX2a(2)                 <---------ANAC58       <---------ARR14(2)         <-----------ARR10                 <---------ANAC58       --------->ARR11(3)         --------->ARR11(3)                 <---------ANAC46       <---------ARR11(3)         <---------ARR11(3)              <---------AtMYB61    <XXXXXXXXXXXXXXXXXXXXMIR165A/B<---------YAB1        <---------AtLEC2        =================HOX2a_HOX2a   --------->YAB1 --------->DOF2<------MYB83     <------ZmHOX2a(1)             --------->ICU4              <---------ARR11(3) -------->HVH21<------MYB46(1)<---------TOE2(3)               <---------YAB1              --------->ARR11(3)   gtgaaagtgagcatggatggtgtgccttatttgaggaagatggatcttggttcgagccaaggctatgatgatctagcctttgctcttgataagctcttcg  5264500  Previous    Next  AGI:  At3g15540.1    Description:  IAA19 (indoleacetic acid-induced protein 19); transcription factor. Identical to Auxin-responsive protein IAA19 (IAA19) [Arabidopsis Thaliana] (GB:O24409;GB:Q8L8X3;GB:Q9LDL6); similar to IAA6 (indoleacetic acid-induced protein 6), transcription factor [Arabidopsis thaliana] (TAIR:AT1G52830.1); similar to Auxin-induced protein AUX22 (GB:P13088); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525) Range:  from: 5264031    to: 5265685    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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