Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->ANAC46                             ----------->RAV1(1)             <---------At4g35610                                                ----------------->AG  --------->KAN4(2)       --------->PCF2                                     --------->GLK1(1) -------TEIL --------->At4g35610                                       <------ZmHOX2a(2)    --------- -----------AtSPL8    <---------ICU4                   >>>>>>>>>TBF1  --------->AGP1 <---------ATHB12   agtacattccattttagctgaaactaatgacccacaaaacaaaatggtacaagggaagaagaaaatgagatagatccaaatatccaaatgatgcaaaagc  5248700                                                   <---------YAB1                                                  <---------AHL20(2)                                                  --------->AHL20(2)                                                 --------->YAB1                                                <---------YAB1                                              <---------ICU4                                              -------->ATHB1                                              --------->YAB1                                              --------->ATHB51                          --------->YAB1      <--------HAHB4                       --------->YAB1         --------->AHL20(2)                      <---------AHL20(2)     <---------ATHB12                    --------->CCA1(2)        <---------ATHB51    <-----------GT1<---------ARR11(3)        --------->ICU4          <---------YAB1              <--- ->DOF2            --------->ARR11(3)      --------->WOX13(1) ------->TEIL                     ------   ccattttttcaatcccaataagatataatgacaatagtacaataccaattattaaaattacatggacctctattatggaggtgagaaactttctatggac  5248800                                      ---------->DOF2                                              <-                   <---------------AGL15             ------>ZmHOX2a(2)                  <---------ANAC58                   --------------->AGL15           <---------ARR14(2)                   <---------ANAC46                  <-----------------AGL1           --------->ARR14(2)                   <---------ANAC58 ------MYB59      <-----------------AGL2     --------->ATHB12                       <----------DOF2-- ->TEIL           --------->TOE2(3) --------->ANAC46<------ZmHOX2a(2)        <----------DOF2       <-   ctcactaaatttcaattcattctcaatatggtctatacactaaagatagattggatccaaaaaaacccagcctatatagctttggcctttgtgtgagagt  5248900                                                                                                <----                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                               <-----              <---------AHL20(2)                                                              <------             --------->AHL20(2)                                                             <--------          ----------->GT1                                                               <---------WRKY18(1)          --------->ATHB12                                                             --------->WRKY38(1)          -------->HAHB4                                                               --------->WRKY12         --------->ICU4                                                                ----------->HVH21         <---------YAB1                                                                --------->WRKY45  ----------->GT1                                                                     <---------MYB52(1) --------ZAT2<---------AHL20(2)                                                      <-------GAMYB <- ------->At4g35610                            <---------AtLEC2                       --------->At4g35610 --------At4g35610                ---------->DOF2                                    <---------At4g35610   aagctggtaaaatgattaaataagttgaatttggcagaaagcatgtttgcattgaattttctcattttgtttcttctaaagtttctccgttgacctgttg  5249000                                                                     --------->At4g35610                                                                    ------->GAMYB --MYB46(1)                                                        --------->MYB46(3)          <----- -----MYB46(3)                                                    ------>MYB46(1)             ------- --MYB83                                                          -------->P                  ------- ----MYB46(3)                                                    --------->MYB55(1)           ------- ----AtMYB61                                                    --------->AtMYB61        <-----------GT1 --P                                             --------->GLK1(2)------>MYB83        --------->ANAC55(1) ---RAV1(1)  --------->WRKY18(1)                <---------GLK1(2)--------->MYB52(1)   <---------ANAC55(2) --------ZAT18   <---------ATHB12            --------->YAB1     --------->MYB46(3)    --------->ANAC55(2)   gtgaacttggaattggtcaaacattcaaactttgacaaatagagcattcagaatttgaaaattagaccaaccgctccattacaaaaacatgtaaccaagt  5249100                                                                                       --------->AtLEC2        ---------->ID1                                                               <---------ANAC46 <---------ZAT18                                               <---------ZAT2        <---------ANAC58 ------HVH21                                              ----------->HVH21          <---------ANAC58 -->ANAC58            <----------DOF2           --------->WRKY38(1)                 --------->MYB52(2) -->ANAC58            --------->TOE2(3)         --------->WRKY12         ============================ -->ANAC46         *TSS           ---------->DOF2<---------WRKY18(1)     ---------->DOF2   cagtggtcttgttctcttgtgtttctttaatatagagaaagaagactcccttgactctctctcacagctagtttataaagaaacgtttcttgcaaaattc  5249200                                                                                              <------ZmHOX2a(2)                                                                                             <-------                                                                                        -------->P                                                                                        ------>MYB46(1)                                                                                        ------>MYB83                                                                                        =============                                                                                        --------->MYB52(1)                                                                                       --------->MYB52(1)                                                                                       --------->MYB55(1)                                                                                 --------->LBD16                     <---------ANAC58                                          ------>ZmHOX2a(2)                     <---------ANAC58                                         =======================                     <---------ANAC55(2)                                      --------->CCA1(2)                  <---------MYB52(1)                                          <------ZmHOX2a(2)                 <-------GAMYB                                                --------->ARR14(1)                --------->MYB52(2)              ----------->RAV1(2)          --------->ARR11(1)             <-----------TGA1               ====================================HOX2a_HOX2a  <-------             ------------>AtMYB77           ------>ZmHOX2a(2)                <---------ARR11(3)             <-----------HVH21             =====================================HOX2a_HOX2a--------->LBD16            --------->ANAC55(1)            <------ZmHOX2a(2)                 <---------ARR14(2)            --------->ANAC46              <---------ARR11(3)                 --------->ARR14(2)            --------->bZIP60(2)           <---------ARR14(2)                 --------->ARR11(3)            <---------TGA1a               --------->ARR14(2)             =============HOX2a_HOX2a            --------->ANAC58             <------ZmHOX2a(1)               ============================HOX2a_HOX2a            <---------O2                <---------HSFB2a(1)              <------ZmHOX2a(1)------->GAMYB            --------->TGA1a             --------->HSFB2a(1)           <---------LBD16 --------->AtMYB61            --------->O2                --------->HSFC1(2)       <---------At4g35610  --------->MYB46(3)            =============MYC_MYB   <---------HSFB2a(2)        ----------->ARR10======================            --------->ANAC58       --------->HSFB2a(2)       <------NtERF2  --------->HSFB2a(1) -----          <---------ALFIN1         <---------HSFC1(1)      <---------ANAC46 <---------HSFB2a(1)<-----         <-------TEIL<---------ANAC46   <---------HSFC1(2) <---------ANAC58 <---------HSFC1(2)=======        --------->CCA1(2)          --------->HSFC1(1)      <---------ANAC58----------->ARR10 -------- =====================bZIP_DOF    <---------ANAC46   <---------REM1(1)<-----------RAV1(2) ===========   ttagcaagagatacacgtcagttacttatgcaggtttcgagaaggatcccatctggtgaaggcgtagagatgccaggaagatccgagaccaaccggatca  5249300          <---------O2          --------->TGA1a          ================================MYC_MYB          <---------TGA1a         <---------LBD16       --------->ATERF1(1)    --------->ATERF1(1)    <------ZmHOX2a(1)                                                          <---------SPL7   <---------ATERF1(1)              <---------ANAC58                         --------->ANAC58  --------->ALFIN1                  <---------ANAC58                         --------->ANAC46 ----HVH21--------->O2              <---------ANAC46                         --------->ANAC58     --- ===================MYC_MYB        <---------At4g35610                     <---------AtLEC2    <----- ==========HOX2a_HOX2a           <--------P<-------PIF5                   <---------REM1(2)   ------>NtERF2 --ARR14(2)                   --------->HSFB2a(2)                         --------->ZAT14    <------- ==========HOX2a_HOX2a       <---------ANAC46        <---------RAP2.6(2)  <---------ZAT14  <---------ANAC58 ------>HVH21   --------->MYB59 <---------MYB52(1)  --------->RAP2.6(3)   --------->ZAT18  <---------ANAC58 ------RAV1(2) <-----------RAV1(2) --------->At4g35610                  <---------ZAT18   <---------- ==========HOX2a_HOX2a    <---------ARR14(2)        --------->SPL7      --------->ZAT18 --------->MYB52(2) ->ARR14(2)  <-----------HVH21<---------HSFB2a(2)  <------ZmHOX2a(1)   --------->ALFIN1<---------AtMYB61 ===================MYC_MYB <-------TEIL   ------->PIF5        <---------WRKY12----------->HVH21  ---   gacggaggagccacgggtcaggtctgagggttcgggtagcttgcacttgctcaggacggcctggttcaacgaagtgtgcacggcacgggtttgtggtgcc  5249400                                                                                    <---------GLK1(1)                                                                              <-------GAMYB                              <---------ANAC46                                --------->At4g35610                              --------->ANAC58                                <------NtERF2                              <---------ANAC55(2)                            <---------MYB46(3)                            --------->MYB52(1)                             <---------LBD16                       <---------ANAC58                                <------ZmHOX2a(2)     <-------GAMYB                       <---------ANAC58                    ----------->HVH21<---------ANAC46---------                   --------->SPL7                        <----------DOF2  --------->LBD16   <-------- ------>ANAC58   --------->LBD16   --------->At4g35610--------->ARR11(3)<---------LBD16<---------LBD16 -NtERF2        --------->ANAC46   <---------At4g35610<---------ARR11(3)------>ZmHOX2a(2)   --------- --PCF2   <---------ANAC58 ----------->TGA1 <---------REM1(1)         <---------ARR14(2)  <---------MYB52(1) -RAV1(1) <---------ANAC58 ----------->HVH21--------->ALFIN1          --------->ARR14(2) --------->LBD16 ------>ANAC58 <---------LBD16--------->ANAC58   <---------ANAC46--------->DEAR3(1)------->TEIL     <   aagcgatgagaggcttatgcggaaggcgagtgacggaagcagagaggtgttgcgaagagctttgacacctccgatccggcggatgaatctccggtggtta  5249500     ------>NtERF2    ------>NtERF2 --------->RAP2.6(2)    --------->LBD16<---------RAP2.6(3)                                                        -------   <---------RAP2.6(2)                                                                  <-------GAMYB  <---------LBD16 --------->DEAR3(1)            <---------YAB1                         <---------MYB46(3) -->GT1 ----------->RAV1(1)                   <---------ICU4                      <---------DAG2----- -MYB46(3)     ------>MYB83                   --------->YAB1                      <----------DOF2 >MYB55(2)<---------ALFIN1      <---------ARR11(3)   --------->TOE1(2)         <---------ARR11(3) -----------GT1------>MYB46(1)  --------->ARR11(3) ------->TEIL                --------->ARR11(3)   aatttccggccaacacctagccgtctctgtaaaatgtcttctgtttgatcatgaaactgggactcaaaaaatcaaggctgagaactttttggttgaatgt  5249600  Previous    Next  AGI:  At3g15518.1    Description:  similar to hypothetical protein [Nicotiana benthamiana] (GB:BAF02554.1) Range:  from: 5249119    to: 5249761    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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