Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->YAB1                                                                                          --------->TOE2(3)                                                                                          --------->TOE1(3)                                         --------->YAB1                                  ------------                                         <---------ICU4                                  ------------                            <---------AHL20(1)                                           <-----------          <---------YAB1    --------->AHL20(2)                                          ------->TEIL         ------------>CBF   <---------AHL20(2)                                   <-------TEIL        <-----------GT1    --------->AHL20(2)                                <---------TOE1(3)     ----------->GT1     --------->TOE2(3)  <---------ICU4                <---------MYB52(1)--------- ------ZmHOX2a(1) --------->GLK1(1)     <---------YAB1                   --------->TOE1(3)<---------- -------TOE2(3)   <---------GLK1(1) <---------WOX13(1)         --------->YAB1<---------TOE2(3)     <- --ARR11(3)     <------ZmHOX2a(1)  <------------CBF---------->DOF2       --------->TOE2(3)----------- ->ARR11(3)   --------->YAB1--------->AHL20(1)<----------ID1  <-------TEIL--------->DOF5.7(2)      --   taggaaatagttacaataggaattcttcattaaattagattgatcataactacaaaagttaacattcatacatatcgttaaggttcgatgaaccataaat  5212600                            >>>>>>>>>ARR1                            >>>>>>>>>ARR2                            <------------CBF                  --------->AHL20(1)                    --------->YAB1        <---------RVE1(1)  --------->ATHB12 --------->ARR11(3)                                      - ----->AGL3       <---------ARR11(3)        <---------ARR11(3)                                  ----- ----->AGL2       --------->ARR11(3)       --------->CCA1(1)                                    <---- ------AGL3  --------->AHL20(2)        <---------AHL20(1)                 <-----------GT1      ------ -->TBP<---------MYB52(1) <---------YAB1   --------->RVE1(1)           --------->ANAC46        ------ -----AGL15 --------->AHL20(2)         <---------AHL20(2)              --------->ANAC55(2) --------->AHL20(2) --------ARR11(3)--------->RVE1(1)     --------->AHL20(2)     --------->YAB1            <<<<<<<<<WRKY18 ---->AGL15 <---------AHL20(2)         --------->AHL20(1)   <---------ARR11(3)     <---------At4g35610 ------->ARR11(3)--------->CCA1(1)  --------->YAB1<---------CCA1(2)  <-----------GT1  <-----------HVH21   agatattccgatatttaaaatatcttatatgattgtattaataaaatatctcatatattcaaaatcatatttcacttaactatttcgctgtcaaaaaata  5212700      <----------DOF2      <---------DAG2   <---------ALFIN1                                   ------->MYC2                                <-- ------>MYB83                                         <-------MYC2                               ---- -------->P                                           ------->MYC3                            ------- ------>MYB46(1)                                      <-------MYC3                        <---------- ----->ZmHOX2a(1)                                    ----------->GT1              --------->ARR11(3) ---->ARR11(3)                                <---------ANAC58     <---------CCA1(2)     --------->ANAC46 -----ARR11(3)                                <---------ANAC58   --------->YAB1   <---------ARR11(3) --->RVE1(1)                          <----------DOF2--------->ANAC58         ---------->DOF2 <------ --->CCA1(1)  <---------ICU4          <---------DAG2 --------->ANAC58<---------YAB1  <-----------GT1   tcctaccacttttccaacatgacaaaaaaaaaacatactacttttctatcgtggcacgtttaaaaaatcatatcattccaaaaagatttactcgtcagat  5212800            <---------ICU4            --------->ATHB12           <---------YAB1           --------->ICU4         <---------ICU4         --------->YAB1                     --------->ANAC46        --------->ICU4                   --------->MYB52(1)  <---------ARR11(3)                     -------->P  --------->ARR11(3)                     ------>MYB46(1)  <-----------ARR10                      ------>MYB83 --------->CCA1(1)                      --------->MYB55(1) --------->RVE1(1)                     <---------MYB111(2) -------AHL20(2)                       <---------MYB111(1) ----->AHL20(2)                        <---------MYB46(2) -->At4g35610        <-----------GT1   <---------MYB59                                        ------- -HVH21 <---------ATHB12        <---------AHL20(2)<----------DOF2 <-----------GT1            -------- ---At4g35610     --------->ARR14(2)<-----------GT1        ---------->DOF2               ---------->DOF2   taaatatctaatcatcattggattcacaatttgtttatttacctaccagacactttaaaaaaaaagattaactacagaataattttgtctaaaaagaaac  5212900                                                                      <---------TOE1(2)                                                                  <---------------AtSPL3                                                              --------->YAB1                                                              <---------ICU4    <-----------GT1                  <-----------HVH21                        <---------ICU4    ----------->TBP                 --------->bZIP60(2)                       --------->YAB1  ----------->TBP        <---------ANAC55(2)                        <---------ANAC58  <---------CCA1(2)        --------->ANAC55(2)             --------->ANAC46  --------->ICU4 <----------DOF2        --------->ANAC46                --------->ANAC58  <---------YAB1--------->TOE2(3)        --------->ANAC55(1)             --------->ANAC58--------->YAB1------->TEIL        --------->ANAC58     --------->TOE1(3)     <---------ANAC46--------->TOE1(1)        --------->ANAC58  <---------CCA1(2)        <---------ANAC58--------->TOE2(1) -->MYB52(1)--------->ANAC58 --------->YAB1  <---------At4g35610  --------------->AtSPL3   *TSS ->ARR11(1) --------->ANAC58 --------->TOE2(3)<---------GLK1(2)   --------------->AtSPL8<------------CBF   ggataagaacacgtaagacatgtcagtcttatcttaaaatccaagtcagcatctcgtgtaataataatctcgtacctttataaaacccctcattgtcttc  5213000                                                                                                -----                                                                                                <----                                                                                         <---------LBD16                                                                                        --------->MYB52(1)                                                                                        ------>MYB46(1)                                                                                        -------->P                                                                                        ------>MYB83                                                                                       <---------ALFIN1                                                                                       --------->MYB55(1)                                                                                      <---------MYB55(2)                                                                                      <---------MYB111(2)                                                                                      --------->DEAR3(1)                                                                                     --------->ANAC58                                  ---------->DOF2                                    --------->ANAC58                              --------->WOX13(1)                                <---------At4g35610                   --------->ANAC58                   <-----------RAV1(1)   <----------DOF2--------->LBD16     --------->YAB1--------->ANAC58     ---------->DOF2                ---------->DOF2--------->MYB46(3)   aacaaaaacataacacatttcaagcattggattaatcaaagacaaagaaaacgaaaatgttggcaatatttcagaaagcttttgctcacccaccggaaga  5213100           <---------GLK1(2)         --------->LBD16                       <------NtERF2        <---------RAP2.6(2)                   --------->LBD16       --------->SPL7    --------->LBD16      ------>NtERF2       --------->RAP2.6(3)                   <---------LBD16       <---------LBD16   ------>NtERF2       --------->LBD16    ------->GAMYB       --------->ANAC46    <---------LBD16   --------->MYB46(3)   <---------ETT(1)    --------->HSFB2a(2)          --------->YAB1 ---->ARR11(3)         <---------LBD16      <---------HSFB2a(2)     ------>ZmHOX2a(1)     <----------DOF2 -----ARR11(3)    <---------CCA1(2) ------>ZmHOX2a(1)        ------>NtERF2     --------->AtMYB61   actcaacagtccggcttctcatttctccggcaaaactcctaaacttcccggcgaaactctctccgacttcctctctcatcaccaaaacaatgctttctct  5213200                         <---------ANAC58                         <---------ANAC58                  ------>NtERF2                 --------->DEAR3(1)                 --------->RAP2.3(2)                 --------->RAP2.3(3)                --------->ORA47(2)                --------->RAP2.3(1)               <---------ATERF1(1)               --------->LBD16               ------>NtERF2              --------->ANAC46            <---------ATERF1(1)           <---------ARR14(2)           --------->ARR14(2)          --------->ATERF1(1)         --------->ANAC58         <---------ATERF1(1)          --------->ANAC58       ---------->TaMYB80         ------>NtERF2  --------->At4g35610               ----------->GT1                         <--        --------->DEAR3(1)       --------->ANAC58      ---------->DOF2                       --------        <---------DEAR3(1)<---------SPL7              <---------WRKY12                       --------     <---------DEAR3(1) <---------At4g35610         --------->TOE2(3)        ---------->DOF2 -------- ------->TEIL --------->DEAR3(1) --------->ANAC58   <-----------HVH21    <-------TEIL    <-----------GT1   atgaacttcggcgactccgccgtcttagcttacgctcgccaagaaacctctcttcgtcaaaggtatatactaatatacataaaacacatatatacaagtc  5213300                                                           <---------ZAT14                                                           <---------ZAT18                                                           --------->ZAT14      ------->TEIL                                    ---------->ID1 <---------MYB46(3)    ------>ZmHOX2a(2)                                  <-----------RAV1(1)   <---------ANAC46<------ZmHOX2a(2) -------CCA1(2)           <---------ICU4          <--------P           --------->ARR11(3) ->ANAC58                --------->ICU4        <---------TOE1(3)       --------->ARR14(2) ->ANAC58              --------->YAB1         <-----------RAV1(2)      <---------ARR11(3) ->ANAC46             <-------TEIL========================RAV          <---------ARR14(2)           <   aaatctctaaatccaattcatagattcataatggttttgttgttttgctcaggttgttctgtggactagatgggatctactgtatgtttctagggagatt  5213400                                                                                   <---------ALFIN1                                                                              --------->HSFB2a(2)                                                                         <---------HSFC1(2)                                   <---------LBD16         --------->ICU4--------->HSFC1(2)   ======= --------->KAN4(2)          ----------->GT1<---------ARR11(3)        ------>ZmHOX2a(2)        ------>ZmHOX2a(2) ---------KAN4(1)       <---------ARR14(2) --------->ARR11(3)    <---------YAB1    --------->ZAT6   gaataatctctgtacattgaatcgacaatacggtttatctgggaagaactcaaacgaggcaatgtttgtgatcgaagcttatcgaacacttcgtgatcgt  5213500  Previous    Next  AGI:  At3g15450.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27450.1); similar to unknown [Populus trichocarpa] (GB:ABK93866.1); contains domain PTHR11772 (PTHR11772); contains domain G3DSA:3.60.20.10 (G3DSA:3.60.20.10); contains domain SSF56235 (SSF56235) Range:  from: 5212991    to: 5214128    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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