Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------ICU4                                                                <----------DOF2      --------->YAB1                                                                   <---------DAG2     <---------YAB1                  <------ZmHOX2a(2)                    ------>ZmHOX2a(2)        -- ---->TOE1(2)                       --------->AGP1                        =========================== ----->RAV1(2)                 ------->TEIL                             <---------ARR11(3)        --- --->At4g35610                <-----------GT1                           --------->ARR11(3)      -----   tgagactataatcgttgcagagagtagcaaatgtaccagatcaaggtccaagagagacagagtttcttctagttgatctccattgctcccttttttttgt  5186700                                                                      <----------DOF2                                                                    ------>ZmHOX2a(1)                                                                  ------>ZmHOX2a(2)                                                                 <------ZmHOX2a(2)                                                                ------->TEIL                                                                --------->ARR14(2)                                                                <---------ARR14(2)        --------->TOE2(3)    ----------->HVH21             --------->YAB1                        ---- ---->ZmHOX2a(1)            <-----------HVH21              <---------ICU4                        ---- =====HOX2a_HOX2a           <---------MYB52(1)            <---------ATHB12                     ------ ------>TOE2(3)            ----------->GT1                --------->ICU4                       <----- ----->ID1              --------->MYB52(1)  <-----------GT1<------------ATHB5        <---------ICU4   ccttaatttttcttaatttctgaagaaaccggtgacttaattagtttctcccttcttacaatcatggatcctctttttttctcttaactatgacataaat  5186800                                                                                             <-------                                                                                       -------->P ---------->DOF2                                     --------->WOX13(1)                --------->MYB52(1) ----->TOE1(3)                                 <----------DOF2   --------->YAB1     --------->ZAT2 ----->TOE2(3)                                 <---------DAG2   <---------YAB1      --------->At4g35610 --->ARR11(3)                                ----------------->AGL1    --------->TOE2(3)     -------- ----ARR11(3)                              <---------ZAT18   --------->AHL20(2)     <---------At4g35610   cttaaaagactattgagaactgagaagtcactctcatatgtacagttccctttatcagtcagatttattatagcctcaattttctgagctaccagagaag  5186900                                                                                                  ---                                                                                                =====                                                                                                -----                                                                                                =====                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                            ---------              --------->CCA1(2)                                                         <---------DAG2           --------->ANAC46                                        ==================================         <---------DOF5.7(2)                    <-----------GT1    ---------->DOF2      <----------DOF2        <---------WRKY38(1)                   <---------YAB1--------->YAB1              =============   ---------->DOF2                        <----------DOF2   <---------ICU4           <-----------GT1 --ZAT14<---------WRKY45               <---------TOE1(3)   <---------ATHB12       --------->ARR14(2) ->ZAT14<---------WRKY12          <----------DOF2       ------>ZmHOX2a(1)         <---------ARR14(2)   tgagtaaaagtcaacgatacaaggtttggattttgacttttaagctttattatccctcctaatcaagacaaaagatgtgaaccagatttactttaccgac  5187000                                                               ------->MYC4                                                               <-------MYC2                                                               ------->MYC3                                                               <-------MYC3                                                               ------->MYC2<-------MYC3                                                               <-------MYC4------->MYC3                                                              <---------TGA1a                                                              <---------O2 ------->PIF5                                                              --------->O2 <-------MYC2                                                              --------->ANAC55(2)                                                   --------->TOE2(3)       ------->MYC4                                                  --------->ANAC55(2)      <-------PIF5                                                  <---------ANAC55(2)      ------->MYC2   <---------------AtSPL8                         --------->ANAC55(1)      <-------MYC4   --------------->AtSPL8                         --------->ANAC58        <---------TGA1a   <---------------AtSPL3                         --------->ANAC58        --------->ANAC55(2) <---------MYB46(3)                              <-------TEIL ======================bZIP_bZIP ------>ALFIN1                                  --------->CCA1(2)         --------->ANAC46 =======================MYC_MYB                --------->ARR11(1)         --------->O2 ---->TGA1a          --------->GLK1(2)         <---------ARR14(2)         =========================== ===================bZIP_DOF                   --------->ARR14(2)         --------->TGA1a -----ANAC46         --------->ARR11(3)       --------->CCA1(2)-------->ABF1 -----TGA1a          <-----------ARR10       <---------------AtSPL8       <---------O2 -----O2             <---------ARR11(3)  ---------->DOF2      --------->TGA1a<-----------HVH21 ---->O2 <----------DOF2                 ===============================bZIP_DOF                ----- >DEAR3(2)      ------->GAMYB            ===========================================bZIP_DOF    ----- =====bZIP_DOF<---------At4g35610    <---------HSFB2a(2)      <---------ANAC55(2)     ------>ZmHOX2a(1) =====bZIP_DOF--------->At4g35610    --------->HSFB2a(2)      --------->ANAC46   <---------At4g35610   gtgttgttgtactttcaactgaaaatctaaactacagttctgaaaaagagatacgtaaatgtacacgtgtctatccacgtgtcaactcctactaaaaacc  5187100                                                                                           --------->ATERF1(1)                                                                                          <---------RAP2.3(1)                                                                                          ------>NtERF2                                                                                          <---------DEAR4(2)                                                                                          <---------ERF1                                                                                          <---------ATERF1(1)                                                                                         <---------DEAR3(1)                                                                                         --------->ATERF1(2)                                                                                         <---------RAP2.3(3)                                                                                         <---------RAP2.3(2)                                                                                         --------->DEAR3(1)                                                                                         <---------ATERF1(2)                                                                                        <---------LBD16                                                                                      <---------DEAR3(1)                                                                                   <---------ICU4                                                                                   --------->ATHB12                          <---------RAP2.6(3)                                     <---------YAB1                         --------->DEAR3(1)                       <---------ICU4--------->REM1(1)<---                         --------->RAP2.6(2)                 <------ZmHOX2a(2) <-------TEIL<------NtERF2                       *TSS                         --------->ZAT18         --------->At4g35610 ----- ========================bZIP_DOF                   <---------ZAT14         <---------At4g35610 <---- ---->TOE2(3)         <-----------GT1<----------DOF2<---------ZAT18    <---------ANAC58 --------->ATERF1(1) ---->TOE1(3) <----------DOF2 ------>ZmHOX2a(1)     --------->ZAT14    <---------ANAC58 <---------ABI4(1)   ctaaacccttccctctctttatattagccgtcctaaactctttatcagtcccagtacactgcgatcaaaaatggcttcagcttcatcatcggcggcgaga  5187200            ----------->GT1          ======================HOX2a_HOX2a           <---------ANAC46          ------>ZmHOX2a(1)           --------->ANAC58 ------->TEIL           --------->ANAC58 <---------ARR11(1)        --------->WOX13(1)         ------>NtERF2      --------->GLK1(2)       <------ZmHOX2a(2)        ----------->HVH21   <-----------ARR10      <---------ARR11(3)       --------->LBD16 <---------DOF5.7(2)         --------->ARR11(3)      --------->ANAC46----------->HVH21      --------->ANAC58                      ------->TEIL     <---------LBD16  --------->WRKY45       --------->ANAC58          <---------ZAT14 ---ZmHOX2a(2)        --------->WRKY12 <---------ANAC46                --------->ZAT14           ---- ---->ARR11(3)        --------->WRKY38(1) --------->WRKY12           <---------ZAT14--------->DEAR3(2) -----ARR11(3)       --------->DOF5.7(2)--------->LBD16            <---------------AtSPL8       <----   tcactcatccgcgacggaaaatcgttgacgaatctattcctccgtggacgtaagatcaatctcaccgagacagtacagaacaatggaccggccattcgat  5187300                             --------->ANAC58                             --------->ANAC58                          --------->ATERF1(1)                         <---------DEAR3(2)                         <---------MYB46(3)                         <---------RAP2.3(1)                         ------>NtERF2                         <---------ERF1                        <---------ANAC46                        --------->ATERF1(2)                        <---------DEAR3(1)                        <---------ATERF1(2)                                            <---------At4g35610                       <------NtERF2                                                 --------->ETT(1)                       --------->ATERF1(1)                                           <<<<<<<<<<DREB2A                       --------->RAP2.3(1)                                           <<<<<<<<<<DREB1A                      <---------RRTF1(1)                                             <---------RAP2.6(2)                      ------>NtERF2                                                  <---------DEAR3(1)                      --------->LBD16                                               --------->RAP2.6(3)                      <---------RAP2.3(1)                                          --------->REM1(2)                      <---------ORA47(2)                                           <-----------HVH21                      <---------ERF1                                              -------------->OsCBT                      <---------ATERF1(1)                                       <---------ANAC46                     <---------RAP2.6(2)                                        --------->ANAC55(2)                     <---------RAP2.3(3)                                        <---------ANAC55(1)                     <---------RRTF1(2)                                         <---------ANAC55(2)                     <---------DREB2C(2)                                        <---------ANAC58                     <---------DEAR3(1)                                 <---------LBD16--------->At4g35610                     <---------RRTF1(3)                               --------->ARR14(2)                     <---------RAP2.3(2)                             --------->GLK1(1) <------NtERF2                     <---------ATERF1(2)                          <---------YAB1<---------ANAC58                     --------->ATERF1(2)                       --------->ARR14(2) --------->ALFIN1                    <---------LBD16                            <---------ARR14(2) ----------->HVH21           <-----------GT1<------NtERF2                      --------->LBD16<----------DOF2   <----------DOF2  --------->ATERF1(1)                <---------DAG2<---------GLK1(1)<---------DEAR3(2) -->ZmHOX2a(2)  <---------At4g35610                    <----------DOF2<---------ARR14(2) -----GLK1(1)   --------->At4g35610        --------->ZAT14 <---------LBD16--------->LBD16   ctctgctttgttttaaccagatgccggcggctagccaataccctgtttactctgaaacttttccggttatgaaatccggtttacgtgtcggcttcgttca  5187400                                             ---------->DOF2                                     <------NtERF2                                     <---------At4g35610                                     --------->At4g35610                                     --------->ATERF1(1)                                        <----                                    <---------ATERF1(1)                                     ---------                                    <---------ERF1                                          <--------                                    ------>NtERF2                                           <--------                                    <---------ORA47(2)                                   --------->ANAC58                                    <---------RAP2.3(1)                                  <---------ANAC55(2)                                   <---------DEAR3(1)               --------->ARR11(3)   --------->ANAC55(2)                                   <---------RAP2.6(2)          ---------->DOF2          --------->ANAC58                                   <---------RAP2.3(2)       ----------->RAV1(1)         --------->ANAC55(1)                                   <---------RAP2.3(3)   <---------ZAT18                <---------LBD16                                  <------NtERF2          --------->ZAT18              <---------ARR14(2)           <---------ANAC46       --------->ATERF1(1)   <---------ANAC46             <------ZmHOX2a(1)        <---------ARR14(2)       <---------ATERF1(1)  <---------MYB46(3)          <------ZmHOX2a(1)        <---------MYB52(1)       <---------RAP2.3(1) <---------AtMYB61         <---------At4g35610 <------ZmHOX2a(1)              <---------DEAR3(1)   --------->ALFIN1   <---------YAB1--------->ARR14(2)   gaaggaggccgtttcggagagagtagggaaaatggaggcggctcatggaaagcgagtggtggacaacaaagatgctgattcagaggaggacacggatttt  5187500                                                                                    --------->ANAC58                        <----------DOF2                                             --------->ANAC58                    --------->WRKY45                                           <---------ZAT14                    --------->WRKY12        ----------->TGA1                   <---------ZAT18                    --------->WRKY38(1)  --------->GLK1(2)                     --------->ZAT18                   --------->DOF5.7(2)  <---------ARR14(2)                     <-------TEIL                 <---------ANAC46       <---------GLK1(2)                   --------->ANAC58 -----YAB1       <---------bZIP60(2)    --------->ARR14(2)                  --------->ANAC58     <--- >ARR14(2)     <---------TGA2(2)        --------->ARR11(3)           <------ZmHOX2a(1)    >>>>>>>>>TBF1 -GLK1(2)     ----------->TGA1        <---------YAB1              <------ZmHOX2a(1) --------->ANAC46 -ARR14(2)<---------WOX13(1)          ----------->ARR10     <------ZmHOX2a(1)  --------->ZAT14-------   gatgaagacgagattgatgacgttgactttgaagacgatgaagattctgacgaagatgatgaggaagaggaggatgacaagtacacaaggaagaagaagt  5187600  Previous    Next  AGI:  At3g15355.1    Description:  PFU1/UBC25 (UBIQUITIN-CONJUGATING ENZYME 25); small conjugating protein ligase. similar to PFU3/UBC26 (UBIQUITIN-CONJUGATING ENZYME 26), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G53020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69746.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 5183746    to: 5186936    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g15357.1    Description:  unknown protein Range:  from: 5187123    to: 5187717    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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