Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->DEAR3(1)                                                  --------->AtMYB61                                                  <---------ALFIN1                                                 --------->MYB46(3)                                                 <---------MYB55(2)                                               --------->AtMYB61                                               --------->DEAR3(1)                                               <---------ALFIN1                                              --------->MYB46(3)                                             ------>NtERF2                                             <---------ATERF1(1)                                           --------->RAP2.3(1)                                           --------->ERF1                                           --------->ATERF1(1)                                          --------->ABI4(2)                                          ------>NtERF2                                          <---------RAP2.3(1)                                         --------->PCF2                                         --------->DEAR3(1)                                         <---------TCP20                                         --------->RAP2.3(2)                                         --------->RAP2.3(3)                                         <---------TCP16(1)                                         --------->ANAC46                                         --------->RRTF1(2)                                        --------->RAP2.3(1)                                        --------->ERF1                                        --------->RRTF1(1)                                        --------->ATERF1(1)                          --------->ARR11(3)--------->DEAR3(1)                          --------->GLK1(2)<------NtERF2                          <---------ARR14(2)--------->RAP2.3(3)          ------>ZmHOX2a(1)            <---------RAP2.3(1)                                     ------        ----------->RAV1(2)            ------>NtERF2     --------->YAB1 <---------ICU4       <-------GAMYB    --------->ARR11(3)    --------->ARR14(2)<---------ALFIN1         --------->WOX13(1)      ========    <---------ARR11(3)   <---------GLK1(2)<---------ATERF1(1)        --------->YAB1         <--------   <---------GLK1(2)<------NtERF2      --------->LBD16   <---------ICU4<---------ATHB12     --------- -----NtERF2      <---------DEAR3(1)   <---------ATERF1(1) <---------YAB1                  <--------P -------->RAV1(1)<---------LBD16     <---------LBD16    <---------ATHB12--------->YAB1     ========== --->NtERF2  --------->GLK1(1)      --------->MYB52(1)  <------ZmHOX2a(2) <---------YAB1<---------TOE1(3) -------ID1  <---------GLK1(1)    <---------GLK1(1)  --------->DEAR3(1)--------->ICU4   <---------TOE2(3)   cgacaaaatctcctgatttctcggcgagaatcttggacttccggcgccaccaccaccgatcatgagtgtattaatcatgagactgttcttgaggttgttg  5147900       ==================================MYC_MYB       <---------TGA1a       <---------ANAC58       <---------ANAC58       <---------ANAC46                                                                         <----       <---------O2                                                                            <-----       --------->TGA1a                                                                         <-----       =============================bZIP_DOF                                                   ------     ------>NtERF2                                                                            -------     --------->LBD16                                                <---------DEAR3(1)        <------    --------->ANAC46                                            <---------YAB1                ------- <---------ARR14(2)                  --------->HSFB2a(2)     --------->ARR14(2)               <------ --------->ARR14(2)         ------------>MYB.PH3(2)          <---------ARR14(2)               ------- ----->GT1     ------>ZmHOX2a(2)  <-----------GT1       <---------ANAC46                     -------- ================MYC_MYB  --------->DAG2              <---------MYB46(3)               -------------- -MYB46(3)   <---------ARR11(3)--------->MYB52(2)    <---------MYB52(1)                <---------YAB1 >MYB111(2)  --------->ARR11(3)<---------MYB46(3)   <-------GAMYB   ------>ZmHOX2a(2)<-----------GT1< ================MYC_MYB ---------->DOF2<---------GLK1(2)<---------ZAT18     --------->YAB1  <-------   ttaaatccgccgtgtgatcttctctcgtaaagtttgttaccagaatgtttcttcggttgtgcggttttgatcggtggaatcacaaaattacccttgccgg  5148000                                           <---------HSFC1(2)                                           --------->HSFB2a(1)                                           --------->HSFC1(2)                                           <---------At4g35610                                           --------->At4g35610                                           <---------HSFB2a(1)                                           --------->ZAT2                                          <-----------ARR10                                         <------ZmHOX2a(1)       <---------DEAR3(1)          <---------LBD16      <------NtERF2             ================HOX2a_HOX2a     <-----------HVH21         =================HOX2a_HOX2a   --------->ATERF1(1)        --------->ARR14(2) --NtERF2                     --------->ARR14(3) ----RAP2.6(3)                <---------ARR14(2) ----SPL7   <------ZmHOX2a(1) --------->ARR11(3) --->LBD16  ==========================HOX2a_HOX2a -->HSFB2a(2)                 <---------ARR14(3) ---HSFB2a(2)                 <---------ARR11(3) -->ATERF1(2)                <---------GLK1(1)           <---------At4g35610 ---ATERF1(2)     <------NtERF2<------ZmHOX2a(2)         --------->At4g35610 -->ETT(1)  ===========================HOX2a_HOX2a<---------MYB52(1)                              --- --------->AGL1<---------LBD16--------->AGP1   <---------LBD16                           --------->At4g35610 --->AGL1  ----------->HVH21 --------->GLK1(1)--------->MYB52(1)                         --------->ZAT2 ------ZmHOX2a(1)--------->LBD16------>ZmHOX2a(2)--------->LBD16                         <---------At4g35610 --LBD16 <------NtERF2--------->GLK1(2)--------->ALFIN1 --------->GLK1(2) ---------->DOF2<---------ZAT2   aaggagtcgtcggaggacgcggagagtctggagatcttggggaggagcttccggtgagcatctgaacgacttgtttgaaagaagaagagtcagcttgaac  5148100                    <---------ARR11(3)                    --------->ARR14(2)                    --------->AGP1                    <---------AGP1                    --------->ARR11(3)           <-------TEIL                    <---------ARR14(2)          <------ZmHOX2a(2)                                   <                   <---------CCA1(2)           <---------ARR14(2)                                  --              --------->YAB1                   --------->AGP1                                      <-              <---------ICU4                   <---------ARR11(3)                              <-----              -------->HAHB4         --------->ICU4                                            <-----             --------->ICU4     <---------bZIP60(1)                                           <------           --------->YAB1       --------->bZIP60(1)   --------->YAB1                         <-------   --------->MYB111(2)------>ZmHOX2a(2)        --------->ARR14(2)                          <---------MYB46(3)   <---------MYB46(3)<------ZmHOX2a(2)         --------->ARR11(3)                         <---------AtMYB61 ------->DOF2<---------YAB1  <---------YAB1---------->DOF2      --------->At4g35610    <---------YAB1   aaaagttgttggataatgatcagatctagttatgatgtgatgatgtaaagatccattgataatggaagatgaaacagatgatgaagaagatgatggtggg  5148200                                     <---------GLK1(1)                                    --------->ARR11(3)                    <---------HSFC1(2)                                    <---------ARR11(3)                    --------->HSFC1(2)                                   <---------HSFB2a(1)                    --------->HSFB2a(1)     <---------GLK1(1)        <---------HSFB2a(2)             --------->YAB1 -------GAMYB                 --------->HSFB2a(2)          ------>ZmHOX2a(1)--------->GLK1(2) ------->MYB52(2)          ------>ZmHOX2a(1)   <---------AHL20(2)         <---------HSFB2a(1) --------MYB46(3)          <----------DOF2     --------->AHL20(2)     ----------->GT1 -MYB46(1)              ---------->ID1  <---------ANAC58  <---------------AGL15 -MYB83                <-----------GT1  <---------ANAC58  --------------->AGL15              -------- ---MYB46(3)          <-----------GT1--------->GLK1(1)   ----------------->AGL3<---------ANAC46------ --ANAC46       <---------TOE2(3)  --------->HSFB2a(1)   ============================================   tttgttgaaatctccattgatgttttatccttttggaagatttcttgattttaatggtttcctctaatagtttggaaaattctgtgtgagttcgagtgaa  5148300                                                                          <---------AHL20(1)                                                                          <---------AHL20(2)                                                                   <------MYB83<---------AHL20(2)                                                                   <---------MYB46(3)                                                                   ----------->GT1                                     <---------TOE2(3)             <------MYB46(1)       <---------HSFB2a(1)                                     <---------TOE1(3)          <------------CBF         --------->HSFB2a(1)        --------->CCA1(2)            --------->DAG2<---------YAB1<---------WOX13(1)    <---------GLK1(2) --->HVH21                     <---------------AGL15           --------->ATHB12--------->AHL20(2) ---->DOF2  *TSS--------->YAB1 --------------->AGL15 ---------->DOF2      --------->AHL20(2)   <----- ==============================================MADS_MADS      <---------YAB1  --------->AHL20(2)   <-   agagaagaagagatgaaatgaaaatgaaggcttcttcataaggttttgggattataaaagaagtttgattggttattttatttaatttggaatctttctt  5148400                                                                    <------NtERF2                                                                    <---------LBD16                                                                --------->ZAT18                                                           <---------GLK1(1)                                                          --------->ARR14(2)                            <---------YAB1               <------ZmHOX2a(1)       <---------ARR11(3)                           <---------ARR11(3)         <---------------ANT  --------->YAB1                           --------->ARR11(3)      <---------TGA1a  --------->LBD16                          --------->CCA1(1)        =====================================bZIP_DOF                          --------->RVE1(1)     ----------->HVH21  <---------LBD16                      --------->AHL20(2)      <---------At4g35610  --------->LBD16                ---                     --------->YAB1           --------->At4g35610 <---------LBD16--------->ARR11(3) -----DOF2          --------->AHL20(2)     ==================bZIP_DOF--------->LBD16   <---------YAB1 --------YAB1     --------->YAB1           ---------->DOF2<---------ARR14(2) ---------->DOF2---------   tatgagaaaaaaacttactaaaataaaaatatcatacagacaaataaaagctgacatgaggatttgtgcccggggaatcaaaagatgtttttattaggca  5148500                                               --------->AHL20(2)                                               <---------AHL20(2)                                               --------->AHL20(1)        <---------ANAC58                <---------TOE2(3)                            <------ZmHOX2a(1)  --------->AHL20(2)                   --------->DAG2                        <----------DOF2  <---------AHL20(2)                  ---------->DOF2                  <----------DOF2 ------>ICU4 <----------DOF2      --------->ZAT18             --------->ATHB12--------->ICU4 >MYB59 <---------ANAC58          <---------ZAT18        <---------ATHB12  ---------->ID1   <------ZmHOX2a(1)   atttttaatttcttactttgaatttgtctgccatagtgcataaaggaaattttttgcaaatgaatgaatggaactttgtctttattaggatttaggactc  5148600                                                                                                  ---                                    --------->YAB1                                               ----                         <-----------GT1                                 <---------YAB1          <---                     --------->AHL20(2)                                 <---------AHL20(1)     ------                     <---------AHL20(2)                                 --------->AHL20(1)     <-----                    <---------AHL20(1)                    --------->HSFB2a(2)      <----------DOF2<--                    --------->AHL20(2)           --------->YAB1         <---------AHL20(2)    <------                    --------->AHL20(1)       <---------ANAC58          --------->YAB1         <------           --------->GLK1(2) --------->ANAC46<---------ANAC58          --------->AHL20(2)   ---------  <---------YAB1    <---------AHL20(2)      --------->ATHB12           <---------AHL20(2)  <---------YAB1   tactaatattgaaattctataatttatttacacactattcatagaatgcttgcataacttatcgaacaacaaattatatttgatactttagtttttataa  5148700     --------->ICU4     <---------YAB1   --------->YAB1 <-----------GT1                                                     <----------DOF2 ------>YAB1       <----------DOF2 --------->AHL20(2)                <---------DAG2 ----->ICU4       --------------->AGL15--------->YAB1           --------->SPL7 ------YAB1     <-----------GT1    <---------AHL20(2)       --------------->AtSPL8 --->YAB1       ---------->ID1    <---------AHL20(2)        <---------------AtSPL3 ----ICU4<-----------GT1          --------->AHL20(2)       <----------DOF2 -------ICU4<----------DOF2    --------->AHL20(2)         <---------ANAC58           <---------ALFIN1 ---AHL20(2)<---------DAG2    <---------AHL20(2)          <---------ANAC58   <---------AtLEC2 ---YAB1 <---------AHL20(2)   --------->AHL20(2)       <---------WOX13(1)   <-------TEIL           -- >YAB1<---------ICU4        --------->YAB1      ---------->DOF2<-----------GT1 --------->AtLEC2    <-   ttataacataattactttttccttttttaaaaataaataaatcatattgctaaagtaattgctttgtacgactttatgtgcatgcatacacctctacata  5148800  Previous    Next  AGI:  At3g15300.1    Description:  VQ motif-containing protein. similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT5G53830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39301.1); contains InterPro domain VQ (InterPro:IPR008889) Range:  from: 5147412    to: 5148312    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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