Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------ARR11(3)                                                                          <--      --------->AHL20(1)                               <-------GAMYB                              ---     --------->AHL20(2)                               --------->LBD16                             --- <---------AHL20(2)                                 <---------LBD16<--------P             <------NtERF2 --------->AHL20(2)                               --------->ARR14(2)                    <---------ANAC46 ---->MYB46(1)                   <---------ALFIN1 <---------ARR14(2)      <---------YAB1--------->ETT(1) ---->MYB83                 <---------ZAT18     ----------->ARR10  <---------WOX13(1) <-----------HVH21 ------MYB59                --------->ZAT18  <---------ANAC58    ----------->GT1   <---------ANAC58 >YAB1--------->ARR11(3)--------->DAG2       <---------ANAC58    <---------MYB46(3)<---------ANAC46 --------WRI1          ---------->DOF2   <---------MYB52(1)     --------->ALFIN1   <---------ANAC58 <   caaataaatatatacttttgacgagaaaagtggacacacctccgtttgcttaaatccggttgagaagtggttgattccgattgtagcttgtcggagagca  5144600                                           <---------MYB52(1)                                          --------->LBD16                                          --------->At5g28300                      <---------ARR11(3) --------->TGA1a                      --------->ARR11(3) --------->O2             --------->ANAC46            <---------ANAC46       <---------GLK1(1)                 <---------TGA1a                                            *TSS       --------->GLK1(1)                 <---------O2                                              <-  --------->LBD16    --------->GLK1(1) ------>NtERF2                                             ----  ----------->GT1    <---------GLK1(1) --------->ABI4(1)                   --------->TOE2(3) -------- -------ARR14(2)   <------ZmHOX2a(1)  --------->ANAC46                    ----------->GT1   <-------- ------>ARR14(2) --------->LBD16      --------->DEAR3(1)              <------NtERF2   <---------MYB52(1) ------>MYB52(1)<-----------RAV1(2)  --------->MYB46(3)              >>>>>>>>>>>>>>>>>LFY   --------- ---------LBD16--------->LBD16      <---------At5g28300             --------->ANAC46 <-------GAMYB --   taaccggagaaatctcccccaggagttcttgaaacattcaccgccgtgagtctcttcaccaaaaacctagtcgccattgttaattttcgttgtcttgatt  5144700                                                                   <---------ANAC46                                                                   <---------ANAC55(2)                                                                   <---------HSFB2a(2)                                                                   --------->ANAC55(2)                                                                   --------->ANAC58                                                                   --------->HSFB2a(2)                                                                   --------->ANAC58                                                                  <---------LBD16                                                                 --------->MYB52(1)                                                        --------->CCA1(2)  --------->AHL20(2)                                    <------ZmHOX2a(2)  <---------AHL20(2)                                   --------->ARR14(2) --------ARR11(3)                                      <---------ARR11(3) ------->ARR10                                         --------->ARR11(3)            --------->ALFIN1 ->ATHB12                                              <---------ARR14(2)            <---------ANAC46 -YAB1    <---------MYB52(1)                          --------->GLK1(1)           <---------AtMYB61 >ICU4  <-----------RAV1(1) <---------ALFIN1         ----------->ARR10      --------->At4g35610 ------->ARR11(3)        --------->ANAC46   --------->MYB111(1) <---------ARR14(2)--------->ALFIN1   agattttaatctgttgtttcccattatccctcactcgcttaagaagtagttagcgaagatccaaaggttacggaagtcagtggaatggtgggagtatcag  5144800                                                                     --------->HSFB2a(1)                                                                     <---------HSFC1(2)                  --------->TOE2(2)                             <---------HSFB2a(2)                  <---------SPL7                          <-------PIF4                  --------->TOE1(2)                       ------->PIF4                --------------->AtSPL3                    <-------MYC3               --------->MYB52(1)                         <-------PIF5        ------->PIF5                                      ------->MYC2        <-------MYC3                                      <-------MYC4        ------->MYC4                                      ------->PIF5        <-------MYC4                                      ------->MYC4                --------->ATHB12        <-------PIF5                                      <-------MYC2                --------->ATHB51        ------->MYC2       ------->MYC3                   ------->MYC3               <---------YAB1        ------->MYC3      --------->ANAC55(2)            --------->O2<---------HSFB2a(1)        <-------MYC2      <---------ANAC55(2)            <---------TGA1a          --------->ICU4       --------->O2  ----------->HVH21                   <---------ANAC55(2)      <---------YAB1       <---------O2  --------->ANAC58                    <---------O2--------->HSFC1(2)       --------->TGA1a    --------->TGA1a                --------->ANAC55(2)      ------>ZmHOX2a(1)       <---------TGA1a    --------->ANAC58               --------->TGA1a         --------->TOE2(3)       <---------ANAC55(2)--------->ANAC58              ------------>OsbHLH66 --------->ARR14(2)       <---------ANAC46   --------->O2                 <---------ALFIN1       <---------ARR11(3)      ------------>OsbHLH66<-------MYC3                <------------OsbHLH66  <---------ARR14(2)     <---------ALFIN1--------->ANAC46                 <---------REM1(2)      <---------CCA1(2)   ----------->RAV1(1)    <---------O2              --------->ANAC46 <---------DEAR3(2)   <-----------HVH21 --------->ANAC58              <---------HSFB2a(2) <---------ARR14(2)  ----------->HVH21 --------->SPL7                 --------->HSFB2a(2) --------->ARR14(2)       <----   accagcgacacgtggacaaacgtacgacacgtttctcagttaatgtctcacttctcgacacgtgctcgagacggttcccatatccttattattgggccgt  5144900                                             --------->MYB59                                         --------->MYB46(2)                                         --------->MYB111(2)                                         --------->MYB111(1)                                         --------->MYB59                                       <---------MYB52(1)                                      ------------>MYB.PH3(2)      --------->At4g35610                                    <---------YAB1     --------->GLK1(2)                                  --------->YAB1--------->PCF2     --------->ZAT2         <---------HSFB2a(2)                             ----------------->AGL2   <---------GLK1(2)                   --------->HSFB2a(2)             <-------GAMYB--------->MYB59--------->MYB52(2)        <---------ZAT2        <---------LBD16 -----MYB52(1) <---------REM1(1) <---------YAB1 --------->ZAT18--------->YAB1      <----------DOF2   ttctatattttggcccgttgtagccatttaggcccattatagttagttagggcccagtttctgaagcatagctggaaaatgttctctttaatctggaaac  5145000                                          ---------->DOF2                                <------NtERF2                                <---------------------WRI1                               <---------ATERF1(1)                               ------>NtERF2                               --------->LBD16                                         <------MYB46(1)                              <---------ATERF1(2)                                      <------MYB83                              --------->ATERF1(2)                                     --------->MYB111(1)                              --------->DEAR3(1)                                   --------->MYB111(1)                              <---------DEAR3(1)                 --------->At4g35610  <---------MYB46(3)                             <---------LBD16                   <------NtERF2       <---------MYB46(3)                             --------->ATERF1(1)              --------->LBD16  <------NtERF2           <---------ZAT14 ------>ZmHOX2a(2)                 <---------ANAC46<---------ANAC46     --------->MYB52(1)<---------YAB1  ---------->DOF2      <---------LBD16  --------->ETT(1)    *TSS   --------->ZAT14<------ZmHOX2a(2)        ----------->GT1        --------->ALFIN1   tacagaataacagaacagagagattacgatcgccggcgattcaaagaagcagatagaaaaatggcggagatgaagagtgtcggagtagttggtgctggac  5145100                              <---------TGA1a                              <---------O2                          --------->ABI4(1)                          <---------ATERF1(1)                         --------->ANAC46                         --------->ATERF1(2)                         <---------ATERF1(2)                         --------->DEAR3(1)                         --------->RRTF1(2)                         --------->RRTF1(3)                         --------->DREB2C(2)                         --------->RAP2.3(3)                         --------->RAP2.6(2)                        --------->RAP2.3(1)                        --------->ERF1                       <---------ATERF1(1)                                                  ---------                      --------->ANAC46                                                      ---------                --------->LBD16                                                             <--------               --------->ANAC55(2)                                                          <--------               --------->ANAC58                                                          --------->LBD16               <---------ANAC55(2)                                                      --------->DEAR3(1)               --------->ANAC46      <---------ANAC46                                  <------NtERF2               --------->ANAC58    <---------ZAT18                                    ------>NtERF2              <---------LBD16 --------->TGA1a                                        --------->DEAR3(1)          <---------ARR14(2)  --------->O2                                           <---------ALFIN1          --------->ARR14(2) ------>NtERF2   <---------MYB52(1)                     <---------MYB55(2)          <---------GLK1(2)<------NtERF2----------->HVH21                           --------->MYB46(3)         <------ZmHOX2a(1)------>NtERF2<------NtERF2                              --------->ANAC46      <-----------RAV1(2)--------->RAP2.3(2) --------->ALFIN1    ------>ZmHOX2a(2)--------->ANAC58     <-------TEIL  --------->ZAT2  --------->ZAT18         <---------At4g35610    --------->ANAC58   aaatgggttcaggaatcgcgcaactcgccgccacgagtggcctcgacgtttggctcatggacgctgatcgagatgccctctctcgagccaccgcagctat  5145200                                                    ------>ZmHOX2a(1)                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                --------->ARR14(2)                                                --------->ARR14(3)                                                <---------ARR14(2)               <---------ANAC55(2)                                                <---------ARR14(3)         --------->AHL20(1)                                                <---------ARR11(3)         --------->AHL20(2)                                                --------->AGP1             <---------AHL20(2)    ------>ZmHOX2a(1)                         ----------->ARR10            <---------AHL20(1) ------>ZmHOX2a(1)                       --------->ANAC58            <-----------GT1 >ZAT2 --------->LBD16                   --------->ANAC58         <---------GLK1(2)             ----- >At4g35610                  --------->ARR11(3) --------->ARR11(3)--------->ARR11(3)            <---- -ZAT2 <-----------HVH21 ---------->DOF2 --------->ANAC46       <---------TOE2(3)--------->ANAC55(2) -At4g35610      <-------TEIL<---------ARR11(3) <---------GLK1(2) <---------ARR11(3)     <----------DOF2   ctcctcctccgtcaaacgattcgtctccaaaggtctaatctccaaggcaagatcctccttgtaatttagattttcaatttattaagtatttctttctccg  5145300                                                     --------->ZAT14                                                     <---------ZAT14                                  --------->YAB1  <---------ANAC46                         <---------GLK1(2)                    <---------At5g28300           <---------ANAC58                --------->ANAC58                  <------ZmHOX2a(2)               <---------ANAC58                --------->ANAC58 ---->LBD16      --------->ARR11(3)          --------->YAB1                    ----------->HVH21 -------HVH21    <---------ARR11(3)         <---------ATHB12    --------->ATHB12  --------->ANAC46   tcgaatcaactaattgagagatcaccgttttagcaaacatattcaaatcatagcctgtactgtttttgatttgtatgctcgctcacgcatattgattctt  5145400                  <---------MYB52(1)               <---------TOE1(2)               <---------TOE2(2)              ------>ZmHOX2a(1)           <<<<<<<<<ARR1                                        <---------TOE2(3)           <------ZmHOX2a(2)                            <---------AtLEC2           <<<<<<<<<ARR2   <---------YAB1       --------->AHL20(1)          <---------ARR14(2)                    --------->ARR11(3)          --------->ARR14(2)     <---------ZAT6 <---------ARR11(3)     ----------->GT1          <---------ARR11(3)--------->YAB1      <---------AHL20(1)<------ZmHOX2a(1)               ---   --------->REM1(1)--------->MYB52(2)    <----------DOF2  <------ZmHOX2a(1)                      <--   aggctacttcacgatcctatgttagttttatgatagtgttaagactttgatatattttgcaggatttaggaaaatgtaaaatgggagaaatttgtggtga  5145500  Previous    Next  AGI:  At3g15280.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO66421.1) Range:  from: 5143975    to: 5144700    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g15290.1    Description:  3-hydroxybutyryl-CoA dehydrogenase, putative. similar to AIM1 (ABNORMAL INFLORESCENCE MERISTEM), enoyl-CoA hydratase [Arabidopsis thaliana] (TAIR:AT4G29010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39308.1); contains InterPro domain 3-hydroxyacyl-CoA dehydrogenase, C-terminal; (InterPro:IPR006108); contains InterPro domain 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; (InterPro:IPR006176); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Dehydrogenase, multihelical; (InterPro:IPR013328); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal-like; (InterPro:IPR008927); Range:  from: 5145004    to: 5146863    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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