Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <------ZmHOX2a(1)   ------>NtERF2                                                         <---------ANAC46 -------->At4g35610                                                     <------NtERF2 ---------At4g35610                ------>NtERF2                       ------>NtERF2 ------->DEAR3(1)                 --------->ETT(2)                    ----------->HVH21 ------>MYB46(3)                 ---------->ID1                       <---------ANAC46 ----NtERF2          <---------ZAT14                             <---------ANAC46 -->NtERF2           --------->ZAT14<------NtERF2                <---------bZIP60(2)                < -----ALFIN1    <xxxxxxxxxxxxxxxxxxxxsmallRNA(s2)             <-----------RAV1(1)       <---------At4g35610   accgctgcgatgaatacgacctgtacagagacgttgtcgccatctccatcgccttccttctcttgtgttgtggcgacgagtaggagctactgctcatcgt  5136800                                                           <---------AHL20(2)                                                          <---------YAB1         <-----------HVH21                                <---------WOX13(1)  <---------TOE2(3)                                     --------->ATHB12        <-----------GT1  <---------TOE1(3)                       --------->ARR14(2)        <---------MYB46(3) <---------At5g28300             --------->REM1(1)     <---------YAB1<-------GAMYB -----------GT1<---------At4g35610        <---------ARR14(2)  <-----------RAV1(1)   <---------MYB46(3)   atttacggttttgtcacatctgctaattggaggcttcaacttcaaatccagtggctcttgattaatggggctgttgttcttgttactggttgaatagctc  5136900                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)                                                                       <---------ANAC46                                                                       <------MYB83                                                                       <------MYB46(1)                                                                       ----------->GT1                                                 <----------DOF2      <---------AtMYB61                                  --------->AtMYB61                   <---------DEAR3(1)                            <-----------GT1    --------->At4g35610  <---------MYB52(1)              <                         <---------MYB46(3)    <---------At4g35610 --------->LBD16                 <- <---------HSFB2a(2)  <---------MYB46(3)    --------->At4g35610   <---------LBD16                  <- --------->HSFB2a(2)<---------At4g35610     <---------At4g35610  <---------LBD16                 <--- <---------LBD16    --------->At4g35610    <-----------RAV1(1)--------->ZAT18          <---------SPL7   gttctcggagattgagaagttgagctgttgttactaccaaaactactgctgctgttcgtactattgcaccgggaggtgtattcgctggtcgtactcgaga  5137000                                    <---------ANAC55(1)                                    <---------ANAC55(2)                                    <---------ANAC58                                    <---------ANAC46                                    <---------ANAC58                              <------NtERF2                             ------>NtERF2                            --------->LBD16                            <---------ANAC46                           <------NtERF2                           --------->ATERF1(1)                           <---------LBD16                          <---------ATERF1(1)                          --------->ABI4(1)                          ------>NtERF2                                           --------->GLK1(1)                         --------->RAP2.3(3)                                      <---------ARR14(2)                         --------->ATERF1(2)                                      --------->ARR14(2)                         --------->RAP2.3(2)                                 <------NtERF2                         <---------ATERF1(2)                                 ----------->GT1                         <---------DEAR3(1)                                 ------>NtERF2                         --------->DEAR3(1)                                 --------->LBD16                        --------->ATERF1(1)            <-------GAMYB       <---------ANAC46           --------->AHL20(2)--------->LBD16           --------->At4g35610<---------LBD16     <----------DOF2    --------->DEAR4(2)        <---------RAP2.6(2)   ------>ZmHOX2a(2) -------->ZAP1          --------->ERF1           --------->RAP2.6(3) --------->ATHB12 ---------At5g28300     --------->RAP2.3(1)     --------->CCA1(2)   <---------YAB1<---------GLK1(1) ----------GT1         <---------ATERF1(1)   --------->ANAC58     --------->CCA1(2)                <- --------WRKY18(1)    <---------DEAR3(1)     --------->ANAC58---------->DOF2<---------MYB46(3)     <- ------WOX13(1)       --------->ANAC46--------->ALFIN1<---------MYB46(3)<---------DEAR3(1)  ---------   ttgaccgctttgtataaatactgctcgccgccgggaatgcgtgtggcaagagacggccgttgaaaaagagatgatcggcgggagaattctctgagaaaga  5137100                                                   <---------ANAC58                                                   <---------ANAC58                                                   <---------ANAC46                                                  <------NtERF2                            ------>ZmHOX2a(2)    <---------MYB46(3)                           <------ZmHOX2a(2)  --------->ABI4(2)                          <---------ARR14(2)  <---------MYB46(3)                          --------->ARR14(2)  --------->MYB55(2)                         ------->GAMYB       <---------AtMYB61       <-----------GT1              ---      <---------ANAC46  --------->MYB46(3)   --------->ALFIN1   <-------GAMYB                   <----   ----------->HVH21  <---------DOF5.7(2)    <---------DEAR3(1)<---------MYB46(3)            <------- --------ANAC58      <---------WRKY12       <---------MYB52(1) --------->MYB52(2)<-----------GT1<---- --------ANAC58      <---------WRKY45      --------->LBD16<------NtERF2       <---------GLK1(2) <---- ->DOF2              <---------WRKY38(1) <---------LBD16<---------DEAR3(1)  <---------YAB1<----------DOF2   gtcttgcgacggagaagttggagtcaacgatccgaactcaaactccggtggtggctcgtcggagtttgttgttactcgatgattctccatttcttttggt  5137200                                                     <---------ARR14(2)                                                     --------->ARR14(2)                                                  <---------ANAC58                                                  <---------ANAC46                                                  <---------ANAC58                                                 <------NtERF2                                               --------->ALFIN1                                              ------->PIF5                                              <-------PIF5                                              <-------MYC2                                              <-------MYC4                                              ------->MYC3                                              ------->MYC2                                              -------->ABF1                                              ------->MYC4                                              <-------MYC3                                             --------->O2                                             --------->ANAC55(2)                                             <---------bZIP60(2)                                             >>>>>>>>>>HY5                                             >>>>>>>>>>ABI5                            <-----------HVH21                                             <---------TGA1a                          --------->O2                                             --------->TGA1a                     --------->ANAC58                                             <---------ANAC55(2)        --------->ALFIN1 <-----------RAV1(2)     <---------WOX13(1)                     ------------>OsbHLH66     <---------ANAC58--------->bZIP60(2)  *TSS                     --------->AHL20(2)>>>>>>>>>>AtMYC2         --------->ALFIN1--------->TGA1a ------>ALFIN1             <---------AHL20(2)<---------O2             <---------ANAC58<---------ZAT2 -----ANAC46      --------->ARR14(2)     ----------------->PIF3(1)    <---------ANAC46=============== --AtMYB61        <---------GLK1(2)     --------->ANAC58           --------->ALFIN1 <-----------RAV1(2) -----ANAC58      <---------ARR14(2)    ----------->ARR10    --------->ANAC58    --------->ANAC58 -----ANAC58 <-----------HVH21          --------->ANAC58     --------->ANAC58 --------->WRKY18(1)<---   gtgtttgatttatgcggtcggattcttgtttaaatagaggggaagacacgtggcgaattgggaacggaagtggtgtggaagtcaagccaggtcaggtttt  5137300          ---------->DOF2     ------->PIF5     <-------PIF5     ------->MYC3     <-------MYC4     -------->ABF1     <-------MYC2     ------->MYC2     <-------MYC3     ------->MYC4    <---------TGA1a    --------->TGA1a    --------->ANAC55(2)    --------->O2    =================bZIP_DOF    <---------O2    --------->ANAC46                                           <---------AHL20(1) <---------ZAT14                                               <---------AHL20(2) <---------REM1(2)                               --------->ANAC58 ====================bZIP_DOF                    --------->ANAC58                       <-------TEIL --------GT1----------->GT1              ----------->HVH21     --------->AHL20(2)  <-----------------   gactacacgtggcaaagtgaattgatggtgttcgtaataggcctggacgcgaagccaatattcaaaaaatttgtgatatttgttattcgattcgttctaa  5137400                                                           <----------TaMYB80                                                           --------->KAN4(1)                                                           <---------KAN4(1)                                                           <---------HSFB2a(1)                                                           --------->HSFB2a(1)                                                           --------->GLK1(1)                   <-----                                                   --------->HSFC1(2)                    <---------ARR14(2)                                                   --------->HSFB2a(1)                   --------->ARR14(2)                                                   xxxxxxxxxxxxxxxx>smallRNA(s)         <----------TaMYB80                                                   <---------HSFC1(2)                   --------->GLK1(1)                                                   <---------HSFB2a(1)                  <---------GLK1(1)                                                --------->LBD16                        <-----------ARR10                                               --------->ANAC46                        <---------ARR14(2)                                            <---------ARR14(2)                         ---------->TaMYB80                                            --------->ARR14(2)                         ----------->ARR10                                           <---------GLK1(1)                         --------->LBD16                                           --------->GLK1(1)         <---------AHL20(2)--------->ARR14(2)                          <---------ANAC58<---------ARR14(2)--------->ARR14(2)      <---------ANAC58                      <----------DOF2  <---------HSFB2a(2) <---------GLK1(1)        <---------ANAC46                     <---------ANAC58  --------->HSFB2a(2)---------->TaMYB80        <---------ANAC58      <---------AHL20(2)  <---------ANAC58--------->ARR14(2)<---------ARR14(2)     <---------LBD16 ----WRI1            <---------ANAC58 <---------LBD16     <---------KAN4(2)  <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   acgaatatttgattttgtgatttgctttgcttcgaaaatttctggatatccgaaatttcgaatatccgaatttttttgtgatatttgcggatatccgctt  5137500                                               <---------RVE1(1)                                               --------->GLK1(1)                                              --------->ARR14(2)                                              <---------ARR14(2)                                              <---------ARR11(3)                                              <---------GLK1(2)                 <---------AHL20(2)           --------->ARR11(3)                 --------->AHL20(2)   --------->YAB1              --------->AHL20(2)      <---------ICU4                       --------->YAB1      --------->AHL20(2)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<----------DOF2            xx      <---------AHL20(2)           --------->YAB1                <-----------GT1                  --- -----DOF2    <---------AHL20(2)  <---------AHL20(2)        <---------AHL20(2)                -------   taatacatttaaatattaaaaaaatatgtatactatataatcatatcagatattcaaagtttttatttaacatgctttcaaaataagttctaaataacaa  5137600                       <---------ETT(2)                      --------->WRKY18(1)                     <-----------HVH21                    <xxxxxxxxxxxxxxxxsmallRNA(s)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                <-----------GT1                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           <------MYB46(1)           <------MYB83<---------WRKY38(1)         <---------ANAC46         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <---------MYB46(3)      <---------MYB52(1)     xxxxxxxxxxxxxxxx>smallRNA(s)   <------------AtMYB77<---------WRKY12 --------->MYB52(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                           xxxxxxxxxxxxxxxxxxxxxxx ------>YAB1   ----------->HVH21    <---------YAB1                   --------->AHL20(2)          ---- -->MYB46(3)  <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                 <---------AHL20(2)   --------->YAB1   acataaccgttgttggtatcaccggtcaacaaaatgttatcaaactaattccaaaaactaaaacccgataattttttatgccattgatcaaaacataaca  5137700  Previous    Next  AGI:  At3g15250.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G53163.1) Range:  from: 5136269    to: 5137202    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g15251.1    Description:  unknown protein Range:  from: 5137212    to: 5137325    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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