Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                                                                                                    -                                                             --------->LBD16                      ---                                                            --------->LBD16                      <---                                                   <---------ANAC58                            <-----                                                   <---------ANAC46                       --------->AHL20(2)                                      --------->RAP2.6(3)  <---------LBD16   --------->YAB1 --------- ------->TEIL                   ----------->GT1    <---------ANAC58       ------>ZmHOX2a(1) <-------- >At4g35610                 --------->AHL20(2)    <-------TEIL ---------->DOF2 <---------CCA1(2) ----   atgaaactactctacattgtagcaaaaaaaaaaaatgtaaaacggctacaagtgcgtttatccctgaaaacgcttcctctcatatcagacaaaataataa  5103700                                                                       <---------ARR14(2)                                                                       --------->ARR11(3)                                                                       --------->ARR14(2)                                                                       <---------ARR11(3)                                                                      --------->GLK1(1)                                                                      <---------GLK1(1)                                                                      <----------TaMYB80                                                                     <---------ARR14(2)                                                                     --------->ARR14(2)                                                                     ---------->TaMYB80                                                                     ----------->ARR10                                                                   --------->LBD16                 <- ----->MYB46(1)                                               <----------DOF2 ======================= ----->MYB83                                                <---------ZAT2    <---------------AGL15-- ------->P                                                  --------->ZAT2    --------------->AGL15<- ---->GAMYB                                       <---------ICU4  <---------ANAC46               ---- ------MYB52(2)                                   --------->ATHB12<---------ANAC58              ----- ------GT1                                       --------->ICU4   <---------ANAC58   ----------->GT1 >YAB1    <---------MYB52(1)                     <---------YAB1  <---------LBD16   ---------->DOF2<-- -ICU4---------->ID1<----------DOF2 <---------ZAT14       <---------ALFIN1 ------>ZmHOX2a(1)    ----- ----->MYB46(3)  <-----------GT1    --------->ZAT14     ----------->RAV1(1)--------->AtLEC2     <----   ccaaccttgtccgtttgattttctttctccaattgaactgcaatgttcttcatcattgccacagctttgcggatatcctgcaaataaaagtaaaaacaga  5103800             --------->GLK1(2)            --------->ARR14(2)            <---------ARR14(2)      --------->DAG2     ---------->DOF2                                                                          ------- --------TOE1(1)                           --------->GLK1(1)                                  <------ =================================================MADS_MADS                                  <------- ------->ANAC55(2)               --------------->AGL15                                  <---------HSFB2a(1) --------ANAC55(2)               <---------------AGL15                                  <---------At4g35610 ----->CCA1(2)                  <-----------------AG                                    <---------ZAT2 ---->ARR11(1)                  ----------------->AGL1                                  --------->HSFB2a(1) -----TEIL  <---------GLK1(2)   ----------------->AGL2                                  --------->HSFC1(2) ---->ARR14(2)                  ----------------->AG <---------ZAT18                    <---------HSFC1(2) -----ARR14(2)          --------->AHL20(2) <---------GLK1(1)                 --------->YAB1  ------>ZmHOX2a(1)   tacgagataaagcagattctaggctataaattttgcccaaattagaaatcccttgttcacttctaactagtcaaacccattataagccgaagctcctatc  5103900                          <---------ARR11(3)                          <-----------ARR10                   <---------GLK1(1)       <---------HSFB2a(2)--------->ARR14(2)       --------->HSFB2a(2)<---------ARR14(2)                                            <---------ARR14(2)       <---------LBD16   <------ZmHOX2a(1)                                  <<<<<<<<<<MYB80    --------->ARR11(3)<---------LBD16                                      <------MYB46(1) -->ARR14(2)      <---------ARR11(3)              --------->TOE2(3)        <------MYB83 --------->ARR14(2) ---ARR14(2)      --------->ARR11(3)           <-----------GT1    ----------->GT1  --------->ANAC58 --CCA1(2)   <------ZmHOX2a(1)          --------->TOE2(3)     ---------->DOF2      --------->ANAC58   tgttaacatctcggaggaaagatttcaggaacttctcagaaacctatatttacatcaaaaaaaaaaaagagtgaatttggtttgaacgaaaatactcaca  5104000                                                                                      <---------ARR11(3)                                                                                      --------->ARR14(2)                                                                                --------->ANAC58                                                                                --------->DEAR3(1)                                                                                --------->ANAC58                                                                                --------->bZIP60(1)                                                                                --------->ANAC46                                                                               --------->ATERF1(1)                                                                               --------->RAP2.3(1)                                                                               <------NtERF2                                                                --------->SPL7------>NtERF2                                                              <-----------HVH21--------->SPL7                                                         <---------At4g35610  <---------ATERF1(1)                                                         --------->At4g35610 ----------->HVH21                                                         <---------GLK1(1)   --------->DEAR3(1)                                                     --------->ANAC46       <------NtERF2                                                     ------>NtERF2          --------->ATERF1(1)                                                     --------->LBD16        --------->ORA47(2)                                                    <---------ETT(1)        --------->DEAR3(2)                                                    <---------ATERF1(2)     --------->RAP2.3(1)                                                    --------->HSFB2a(2)    ------>NtERF2                                                    <---------HSFB2a(2)    <---------ATERF1(1)                                                    --------->ATERF1(2)   <---------DEAR3(1)       <---------ARR14(2)                          --------->SPL7        --------->SPL7       --------->ARR14(2)     ---------->DOF2      <---------LBD16      <------ZmHOX2a(1)    --------->ALFIN1         --------->TOE1(2)     --------->RAP2.6(3)  <---------ATERF1(1)  <---------ANAC58      --------->ANAC58         ------>ZmHOX2a(1)<---------At4g35610 <---------ARR11(1)  <---------ANAC58      --------->ANAC58     <---------ARR14(2) <-----------RAV1(2)  <---------CCA1(2)  <---------ANAC46 <----------ARF1           --------->ARR14(2)<---------MYB52(1)------>NtERF2    ---   gcaagcgtggaactgttatcggagacaagaaccaaagaagcgttctgaatccttccggcaactccgtcagacgaggacgccgacgccatatctatcgctc  5104100                                                        --------->DAG2                 --------->At4g35610                                                  --------->ANAC58               <---------TOE2(2)  <                                               *TSS  ---------->DOF2          --------->ANAC46      <                    <---------TOE1(2)        --------->At4g35610             <---------LBD16        <                    <---------TOE2(2)      --------->YAB1                  <---------ARR14(2)      <-                   --------->LBD16      --------->GLK1(1)                  --------->ARR14(2) <------          <-----------GT1               <---------GLK1(1)                 --------->CCA1(2)   ------- --->ZmHOX2a(1)   <---------TOE1(1)----------->GT1--------->ANAC58  --------->TOE1(2)  <---------At4g35610   cttcgctccaattttctcttccgaggtttgttttggagggagaaatcagaagacggaaagagtgagagagcctgcgatatacggaggtttgctgaataaa  5104200                                                                                   --------->SPL7                                                                                  --------->MYB52(1)                                       <---------AHL20(2)                        <------NtERF2                                ----------->GT1                                  <---------SPL7                             --------->ANAC55(2)                             <---------SPL7      ------>NtERF2          <---------ANAC55(2)                            <---------RAP2.6(2)      <---------RAP2.6(3)    --------->ANAC58                               --------->ATERF1(2)     <---------ANAC46        --------->ANAC46                               <---------ATERF1(2)     <---------ANAC58        --------->ANAC58                               --------->MYB46(3)     <---------ANAC58        <---------O2                                  --------->DEAR3(2) ---------ANAC58        --------->ANAC46                                  --------->SPL7 ---------ANAC55(2)     ----------->HVH21       --------->YAB1          <---------SPL7     <---------SPL7 ---------ANAC58      --------->ANAC46 --------->AHL20(2)              <---------ANAC58  ------------ ----------------------TaNAC69(2)  <---------AHL20(2)                  <---------ANAC58  <----------- ---AHL20(2)        ---------->DOF2--------->AHL20(2)  <---------ANAC55(2)--------->MYB52(1) -->AHL20(2)<---------YAB1 <---------ALFIN1  ------>ZmHOX2a(1) <----------ID1------------------>SPL14   atgcgtgccgtcttatgctactataagcgacacgtagttaattaatcctattagaaaacgtgaagaagacaagtcgtaccggccgaacgaagtcgtactg  5104300                                           ------------>CBF                                          ------>NtERF2                                         --------->RAP2.3(3)                                         --------->DEAR3(1)                                        --------->RAP2.3(1)                                       --------->At4g35610                                       <---------At4g35610                                       <---------ATERF1(1)                        --------->ANAC58--------->ATERF1(1)          <---------SPL7--------->ANAC58--------->ERF1                                   <---------RAP2.6(3)         <---------ANAC46             --------->RAP2.6(2)                 *TSS           ------>NtERF2         <---------ANAC58       ---------->DOF2<---------ATHB12         <---------WOX13(1)     <-----         <---------ANAC58     --------->YAB1  <---------ARR14(2)       <---------ANAC58 <---------ANAC58 --------->MYB52(1)     --------->ANAC46<------NtERF2                  <---------AtLEC2 <---------ANAC46 --->AtSPL3         ----------->RAV1(1)<------NtERF2       --------->REM1(2)       --------->ALFIN1 ----AtSPL3<---------CCA1(2) ----------->TBP --------->WOX13(1)        <---------ANAC58 <---------ANAC58   gccaaacgatgtcgtatcgctgcaacaagctataaaaaggccgcagccaatccatagcccgtctagggggtttgcttgataaactgtgtgccgtcttatg  5104400                                                      <----------DOF2                                                     ------>ZmHOX2a(2)                                                    <------ZmHOX2a(2)                                                   <---------ARR11(3)                                              --------->CCA1(2)                                             --------->ARR11(3)                                            ===============HOX2a_HOX2a                          -----                                            ================HOX2a_HOX2a                        <-----               <---------ETT(2)           <---------TOE1(3)        --------->bZIP60(1)         ------               --------->ZAT18            <---------TOE2(3)        <---------bZIP60(1)   <----------DOF2             <-------MYC3      <---------ANAC58    --------->ARR11(3)        <----------DOF2  <------       --------->ANAC46        <---------ANAC58    <---------AGP1  --------->O2        ------>ZmHOX2a(1)     <-----------GT1           <---------ANAC46    --------->AGP1  <---------O2    --------->ARR14(2) ----YAB1    ------->MYC3 --------->CCA1(2) <------ZmHOX2a(1)   --------->ANAC46   <---------ARR14(2)   ctactataaacgacatgtggacaagaagagatggcatgtagtttaaggatatagatctttgaataaacgacgtcgtcttctttccaatcctctttctccg  5104500                --------->At4g35610                --------->ZAT2                <---------ZAT2         --------->DEAR3(1)        --------->ATERF1(1)       <---------ATERF1(1)                  --------->YAB1                   <---------WOX13(1)    --------->ZAT14                      <---------CCA1(2)                 --------->ATHB12  <---------LBD16                      --------->YAB1                     <---------YAB1 ---->LBD16     <---------At4g35610   <---------YAB1                  <----------DOF2 ----LBD16  --------->DEAR3(1)      <---------ICU4                ------>ZmHOX2a(2) --->ANAC46<------NtERF2            --------->YAB1              --------->ARR11(3) ---LBD16<---------DEAR3(1)      --------->WOX13(1)------->TEIL <---------ARR11(3)    <---------YAB1   ggactctggagtcgccgaagctgaaacttcttcatccatcatcatatcatatgaattttttctagtgatcttctttttgattgagaacatgagtgatcaa  5104600  Previous    Next  AGI:  At3g15150.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO39331.1); contains domain PTHR21330 (PTHR21330); contains domain SSF57850 (SSF57850); contains domain PTHR21330:SF1 (PTHR21330:SF1) Range:  from: 5101992    to: 5104147    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g15160.1    Description:  binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO39003.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024) Range:  from: 5104374    to: 5108480    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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