Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <----------DOF2                                                                             ------>NtERF2                                                                             --------->LBD16                                                                            --------->DEAR3(1)                                                                            <---------ALFIN1        <                                                                           --------->ATERF1(1)     <-                                                                          <---------ATERF1(1)     --- <---------ARR11(3)                                                       ------>NtERF2          <--- --------->ARR11(3)                                      <-----------GT1 --------->DEAR3(1)    <----- --->ANAC58                                             <-----------GT1<---------ATERF1(1)   -------- --->ANAC58                     <---------ZAT14   --------->TOE2(3)   --------->ANAC58   <-----------GT1 --AtLEC2      ------->TEIL     --------->ZAT14   <---------DAG2      --------->ANAC58 <-----------GT1   taagttcttcgttcttgaaccctagtcttctcagagaactgccttctcatcaccttatttatcttctcaggctcgcctccgccttcttttttctctatac  5087100      <------NtERF2     --------->LBD16   <---------At4g35610   <------NtERF2   <---------LBD16   --------->At4g35610   --------->ATERF1(1)   --------->RAP2.3(1)  <---------ERF1  <---------RAP2.3(1)  ------>NtERF2  <---------ATERF1(1)  <---------RAP2.6(1)  <---------RRTF1(1)  <---------DEAR4(2)  <---------ORA47(2) --------->DEAR3(1) <---------RAP2.6(2) <---------ATERF1(2)                                            <---------------AGL15 <---------RAP2.3(2)                                       --------->GLK1(1) <---------DREB2C(2)                                      <---------ARR11(1) <---------RRTF1(3)               <---------HSFC1(1)      --------->GLK1(2) <---------RRTF1(2)               --------->HSFB2a(2)     <---------ARR14(2) <---------RAP2.3(3)              --------->HSFC1(1)      --------->ARR14(2) <---------DEAR3(1)          --------->HSFC1(2)           ------->TEIL ---------ABI4(1)            <---------HSFC1(2)          <---------CCA1(2) --------ATERF1(1)           --------->HSFB2a(1)         <---------ARR14(1) ------>ANAC46               <---------HSFB2a(1)    --------->GLK1(2) ------LBD16        --------->LBD16                 <---------ARR14(2)                <----------ID1 ----REM1(2)       ----------->RAV1(1)              --------->ARR14(2)  <---------MYB52(1) ->ZAT14          --------->ANAC46<---------HSFB2a(2)    <---------GLK1(2)        --------->ALFIN1 >>   acggcggcggaacaaagtctcccccagtagaagcttctagaagcttaatctccgaatccgaatctccaattttcggtaattcgggtttgggacaagttga  5087200                                                       ------>ZmHOX2a(2)                                                     <---------ARR11(3)                                  --------------->AtSPL3                          ------>ZmHOX2a(2)          --------->ARR11(3)                             <                         <------ZmHOX2a(2)     <------ZmHOX2a(2)                                   <-                         --------->At4g35610  --------->ARR11(3)                                   --                        <---------AGP1        <---------ARR11(3)                                  ---                        --------->GLK1(2)     <---------GLK1(2)                                   <--                        --------->ARR14(2)    --------->ARR14(2)--------->ANAC58                 ----                        <---------ARR14(2)    --------->ARR14(3)--------->ANAC55(2)             <----                        --------->ARR11(3)    <---------ARR14(3)--------->ANAC58             --------                       <------ZmHOX2a(1)--------->TOE2(3)   <-----------HVH21           <---------HSFB2a(1)                       ================================HOX2a_HOX2a                     <---------ARR11(3)         ----------->GT1<---------ARR11(3)    <---------ARR14(2)<---------ANAC55(2)   <---------GLK1(1)     >>>>>>>>>TBF1     ===============================HOX2a_HOX2a                     --------->GLK1(1)  >>>>>>>>>TBF1    <--------P  ----------->HVH21 --------->TOE2(3)         ---------->DOF2   <------- >>>>>>>TBF1 ---------->DOF2  <---------WOX13(1)------>ZmHOX2a(2)        <---------YAB1--------->ARR11(3)   agaagaagaagaagtaaaagggtaaggatctgaatgacagtacctcaagatccttgatcttctgtcaagtaagttatcaaagaaccagaaatcttcgagg  5087300          <---------ANAC58          <---------ANAC58          <---------ANAC46   <---------YAB1 ------ZmHOX2a(2) --------ARR11(3) ------->ARR11(3) ------>GLK1(1)                       --------->KAN4(2) -------GLK1(1)                     <---------YAB1 ------->ARR10                     --------->ARR11(3) --ZmHOX2a(1)                      <---------ARR11(3)           <---------AHL20(2) ->HSFB2a(2)                      --------->YAB1         <---------AHL20(2)           ---------->DOF2 --HSFB2a(2)                     <---------YAB1   --------->GLK1(2)        ---------->DOF2 --------->CCA1(2)   agatcatcaatggcttcgaattgttccaactcttgatgatcattcgaagtagaatccattttttttttaattcagacaaaagataacataaagagataag  5087400                                                                                           --------->MYB46(3)                                                                                           <xxxxxxxxx                                                                                    --------->ALFIN1                                                                                   <-------MYC3                                                                                   ------->MYC3                                                                                  <---------TGA1a                                                                                  --------->O2                                                                                  <---------O2                                                                              <-----------------AGL1                                                                              ----------------->AGL1                                                                              <XXXXXXXXXXXXXXXXXXXXMIR774                         <----------DOF2                         --------->ICU4   --------->TGA1a                    <<<<<<<<<TBF1  <---------MYB52(1)      --------->LBD16 --------->ATERF1(1)                 <<<<<<<<<TBF1   <------MYB83          --------->GLK1(2)  --------->At4g35610     <--              <<<<<<<<<TBF1      <------MYB46(1)      <---------GLK1(2)   <---------ATERF1(1)   *TSS         <------------------------ANAC81            ----------->ARR10   <------ZmHOX2a(1)  <---------ATHB12   tttgtgttcttgtttcttcttcttcttcttttgttcggttttgtatttgaagcatagattctggggacttattaggaggtgcccatgtgggcaaccattc  5087500                          <------------CBF                        <---------YAB1                        <---------AHL20(2)                       <-----------TBP               --------->AHL20(1)               <---------AHL20(1)                                                         <----------               --------->ARR11(3)                                          --------->AHL20(2)          <---------HSFB2a(2)                                   ---------->DOF2           -----------          --------->HSFB2a(2)                      --------------->AtSPL8  --------->AHL20(1) xxxxxxxxxxxxxxsmallRNA(fl3)              ------------>CBF     --------->AHL20(2)<---------ANAC46 -------At4g35610<------------CBF  <---------ANAC46<---------------AtSPL8  <---------AHL20(2)    ----   agcacttattttctaaaaatattgtttttattgttttatgtggagtcaatgtttttgtacataaataaaagatgaaattttttgagtgaaaacaaaaaat  5087600                                                                                     ----------->GT1                                                                                  --------->HSFB2a(2)                                                                            <-----------GT1                                                                           <-----------GT1          <                                                                          <---------AHL20(2)       <-   <---------AHL20(1)                <----------DOF2                   --------->AHL20(2)          --   --------->AHL20(1)         --------->GLK1(2)                        <---------AHL20(2)         ---   <---------AHL20(2)        <---------ARR11(3)                        <---------AHL20(1)         ---   --------->AHL20(2)        --------->ARR11(3)                        --------->AHL20(1)  --------->ARR11(3)  --------->AHL20(2)         <---------GLK1(2)                      --------->YAB1<---------HSFB2a(2) -----AGL15         <---------ARR14(2)                              --------->AHL20(2)     <---------AHL20(1) ---->AGL15         --------->ARR14(2)    <---------YAB1           <---------ATHB12<---------LBD16<<< ------->GT1      --------->LBD16<----------DOF2            <XXXXXXXXXXXXXXXXXXXXMIR864-5P --------->AHL20(1)   ggaaataaattgacttattccgaatttgaaagattctttcttttacaattgttctgaattttggagtcaataatattttaacttctagggaaaaatattg  5087700                                                                                                    -                                                                                            <--------                                                                                            <--------HAHB4                                                                                            ---------                                                                                            <--------ATHB1                                                                                            ---------                                                                                           <---------ATHB51                                                                                           --------->AHL20(2) ------NtERF2                                                <---------At4g35610           <---------ATHB12 --------RAP2.3(1)                                    --------->ANAC55(2)                  --------->ICU4 ---->NtERF2                                          <---------ANAC55(2)     ---------->DOF2    <--- ------>PCF2<---------AHL20(2)                        <---------ANAC46    <---------HSFB2a(2)    ---- ------>ANAC46            <----------DOF2      <---------ZAT14            --------->HSFB2a(2)    <--- <<<<<<<E2Fa--------->AHL20(2)           <------ZmHOX2a(1)   --------->At4g35610----------->GT1<-----   gcgccacaagttttttaatttcagtaatctttttgtatatttaggagattgcagagacgtattagctgaataggttttggaaaagaaaaaccaataatta  5087800                       <---------AHL20(2)                       --------->AHL20(2)                      --------->AHL20(2)                      --------->AHL20(1) -------->ZAT18       <---------AHL20(1)           <---------HSFB2a(2) -ICU4                <---------AHL20(2)           --------->HSFB2a(2) >ATHB51         <---------AHL20(2)            <---------GLK1(1)                               <----- >YAB1   ----------->GT1                       --------->GLK1(1)                             -------- ------ANAC55(1) --------->AHL20(2)          <------ZmHOX2a(1)          <---------TOE2(3)    <------- ----->ANAC55(2)--------->AHL20(2)       ---------->DOF2                <---------TOE1(3)   --------- ------ANAC55(2)<---------AHL20(2)     --------->YAB1             >>>>>>>>>>GT-3b           <-------- ----AHL20(2)   --------->YAB1        <---------ATHB12   --------->MYB46(3)          ---------->DOF2   agtgttctaagtggataattaaaataaaattagataacaaatcaaaaggatttctggcaacaactaagaaaaataaggtttttcaacaaaagttatgatt  5087900    --------->MYB52(1)                --------->ANAC58 ----------->ARR10                    --------->ANAC46 ----WOX13(1)                    <---------WRKY38(1) ->ATHB12                 <---------YAB1          --------->TOE2(3) --ICU4     --------->YAB1----------->HVH21     --------->ICU4 >ICU4--------->ANAC58  --------->YAB1--------->ANAC58         <---------ANAC55(2)           -------- -YAB1--------->ANAC58<-----------HVH21    --------->O2 --------->TOE2(3) --------->MYB59 --------->AHL20(2)   gctaagaaacggcataataagccctgtcatgacagtcaacatgccatgtgattcttaaacttaatatgtaaacaattcggttctatatcatataaaataa  5088000  Previous    Next  AGI:  At3g15115.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G53180.1) Range:  from: 5085999    to: 5087496    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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