Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->ARR14(2)                                                          <-------MYC3                                                         --------->O2          <-----------RAV1(1)           <---------AHL20(2)------->MYC3      ------>MYB46(1)                  <---------AHL20(1)--------->bZIP60(2)      ------>MYB83                     --------->AHL20(1)<---------TGA1a    --------->AtMYB61                  <---------AHL20(2)<---------O2    <---------ALFIN1               <---------YAB1   --------->ANAC58                        ---------    --------->DEAR3(1)           <-----------GT1    --------->ANAC58                        ---------   --------->MYB46(3)    --------->ZAT6--------->AHL20(2)--------->TGA1a               <---------ATHB12 --------ARR10         ----------->RAV1(1)          --------->ANAC46         <------ZmHOX2a(1)     <-   aactcaccacccttgtggcagaaaacaacactaaattacaatttaatgaggcacaagccacgttgccagacatgccttaggaaaatcaaatcaaacccaa  5072900                                                           ----------->HVH21                                                          <---------ANAC58                                                          <---------ANAC58      --------->YAB1                                     <---------At4g35610 --------->ANAC46                              <---------YAB1 --------->ANAC55(2)                         ----------->GT1 --------->ANAC58                         --------->ARR14(2) --------->ANAC58                         <---------ARR11(3)                                 <------- >ANAC58                                  <---------ARR14(2)               ---------->DOF2   -------- >ANAC58                   ---------->DOF2--------->ARR11(3)    <----------DOF2           ---------->DOF2 ----------GT1----------->GT1           ----------->ARR10--------->At4g35610  --------->ATHB12   ttcacgaaacataaaccagaaaattttagaaaagaagtagagaagatttgttattaagttgctgacctttctagcatcaaagattgaagaaacaaagctt  5073000                     -------->P                     ------>MYB83                     ------>MYB46(1)                   --------->AtMYB61                   ------->GAMYB                  <---------MYB55(2)                  --------->MYB46(3)              --------->YAB1                  <---------MYB52(2)         ----------->HVH21                 --------->ANAC58          ----------->RAV1(2)                 -------->P           --------->ZAT2                 ------>MYB83         --------->HSFB2a(1)                 ------>MYB46(1)      <---------HSFC1(2)                 --------->ANAC58     --------->HSFC1(2)                              <------ZmHOX2a(2)       <---------At4g35610            <---------ZAT2                       ------->GAMYB ---------->DOF2       --------->At4g35610            <---------HSFB2a(1)                 --------->MYB46(3) --HSFC1(2)    --------->AtMYB61      <---------At4g35610                 <---------MYB111(2) ->HSFC1(2)   --------->MYB46(3)      --------->At4g35610               <-----------GT1--------->YAB1   cgaaaattcagcaaaaaccaaccaactcgtattaatcggaagctcccctgaagcataaacagagtttagaaaattaacaacctagacgatcaaaagaaga  5073100                       --------->YAB1                  --------->MYB46(3)       --------->ZAT2                 -------->P                <---------At4g35610                --------->MYB52(1)         --------->At4g35610              <---------MYB52(2)        <---------At4g35610                            <----------ID1   --------->TOE2(3)  <---------ATHB12  --------->At4g35610                   <-----------GT1 -------   ttaagcctaaattccgactaaccaataacaatgcaattcttcagcagctctcgtattaaaaacaatttcaaaaccatatttcaccaaaaacgacaaataa  5073200                                                                                     =============HOX2a_HOX2a                                                                                     --------->CCA1(2)                                                                                     <------ZmHOX2a(2)                         <---------YAB1            --------------->AtSPL8           --------->ARR11(3)                      --------->ARR14(2)        --------->CCA1(2)      <-----------RAV1(2)    <------                      <---------ARR14(2) --------->YAB1               ======================HOX2a_HOX2a           ---------->DOF2              <------ZmHOX2a(2)         <-----------GT1   --------->AGP1        --------->YAB1--------->GLK1(2) =====================================HOX2a_HOX2a   <------ZmHOX2a(1)     <---------ICU4  <---------GLK1(2) <---------ARR11(3)    <---------YAB1         <---------ARR11(3)    --------->ICU4<---------HSFB2a(2)  --------->ARR11(3)<---------MYB59           --------->GLK1(1)  --------->YAB1  --------->HSFB2a(2) <------ZmHOX2a(1)--------->MYB52(1)          <---------GLK1(1) -->AHL20(2)--------->DAG2        <---------MYB52(1)   ------->TEIL   ------>ZmHOX2a(1)--------->TOE1(2)   aaactcataatcaaaaagctcgagaatctgataatcgttaggatcataagagataagtacctgattattttcctcagggagagagagatccaaggacgga  5073300                                                                        <------MYB46(1)                                                                        <---------HSFB2a(1)                                                                ----------->HVH21                                                                ----------->TGA1                                                               <-----------HVH21                             <---------DEAR3(2)                --------->At5g28300                             <---------MYB46(3)           ----------->HVH21    <---------AHL20(2)                            <---------TOE2(2)           ------>ZmHOX2a(1)     <---------AHL20(2)                         --------->TGA1a            <-----------GT1     --------->HSFB2a(1)                         <---------TGA1a        <---------AHL20(2)      <------MYB83                         --------->O2           --------->AHL20(2)      ----------->GT1                         <---------O2          --------->AHL20(1)  <---------ANAC55(2)                        *TSS<---------DEAR3(1) --------->AHL20(2)  <---------ANAC46    ------>ZmHOX2a(1)                <---------YAB1                 <---------AHL20(1)  --------->ANAC58 <-----------GT1 ---SPL7   --------->At4g35610                 <---------AHL20(2)  --------->ANAC58<-----------GT1   cgagagagagattagatgaagattaagacgtcggttttctagtttctaatttattttcctctcacggtgacggaaggttttttattttcctcttcttctc  5073400                                                              <----------DOF2                                                    <---------AHL20(1)                                                    --------->AHL20(2)                                                    <---------AHL20(2)                                      <---------DAG2--------->AHL20(1)                                      <----------DOF2    <-----------GT1                                     <---------ANAC58<---------AHL20(2)                                     <---------ANAC58--------->AHL20(2)                            --                                 <----------DOF2 --------->AHL20(2)          <---------ANAC58      <-                               <---------YAB1    <---------AHL20(2)     <---------MYB46(3)         --          <---------AHL20(2) <---------CCA1(2)  --------->AHL20(2)  --------->ATHB12        ---------      <---------AHL20(2)   <---------ANAC58     <---------AHL20(2) <---------YAB1         --------->SPL7      --------->AHL20(2)   <---------ANAC58 <---------YAB1 ---------->ID1    <---------ANAC58      <-     --------->AHL20(2)  <---------YAB1     <---------AHL20(2)<---------DAG2 <---------ANAC46<-------   agttttatttaattcatttattctcttatgcttatctttgcttttttttattaatttatttgcccttttttcattggtttcttgagttttcggacagcaa  5073500                                          --------->MYB52(1)                                          ------>MYB83                                          ------>MYB46(1)                                         --------->MYB55(1)                                        --------->MYB46(3)                                <---------MYB52(1)               <---------AHL20(2)       <---------MYB59     <---------AHL20(2)    <---------ARR11(3)                          --------->AHL20(2)  <---------AHL20(2)       <---------ARR14(2)                       <---------ICU4  --------->AHL20(2)       --------->KAN4(2)--------->ANAC46       <---------ATHB51 ------->AHL20(1)          --------->ARR11(3)     --------->TOE2(1)<---------AHL20(2) --------AHL20(1)          --------->ARR14(2)     --------->TOE1(1)--------->ICU4        <---------GLK1(1) ------->ARR11(3)         <---------GLK1(1) --------->ANAC58       --------->AHL20(2) <---------YAB1 -->GT1    <---------YAB1 <---------KAN4(1) --------->ANAC58     --------->YAB1 <---------ARR11(3) --------ARR11(3)        ------->TEIL   <---------MYB46(2)   ----------->GT1    --------->ARR11(3) --At4g35610   --------->AHL20(2)    <-----------GT1         ------>ZmHOX2a(2)  --------->GLK1(2)   atatttttttattctaattaaaaaatgaatatcccttatttaccaaacgacatcgtacaaggatcgaaaataattaactcaaaatcttttgatttcccca  5073600                        ------>ZmHOX2a(2)      --------->ANAC58         --------->ANAC58            <---------AHL20(2)   <---------ANAC58                       --------->ANAC58           --------->AHL20(2)    <---------ANAC46                     --------->CCA1(2)           <--         --------------->AGL15   <---------ANAC58           <-----------GT1                  --------   <-----------GT1    <---------ARR11(3)       --------->ANAC58      <---------ARR11(3)<------NtERF2   <---------ICU4   <---------YAB1       ---------->DOF2  --------->AHL20(2) <-----------HVH21<------   tctaattactacatttaatagcatgatcgtttttgtcttgtactaaagcatgccattgaatttaacaacaagataagcatgtcactggcagccattaatg  5073700                                    --------->AHL20(2)                                    <---------AHL20(2)          --------->TOE1(2)                          <----------DOF2                      --------->YAB1                       --------->GLK1(2)        --------->HSFB2a(2)                     ----------->GT1                   --------->MYB52(1)           <---------HSFB2a(2) <------ZmHOX2a(1)  --------->MYB59                 <---------MYB111(1)--------->AHL20(1)   --------->ZAT6           --------->DAG2 -------TOE2(3)  <------------MYB.PH3(2)       <---------LBD16<---------YAB1     ---------->DOF2 ->YAB1          <---------MYB46(2)--------->AHL20(2)    <-----------GT1  --------->AHL20(2) ---TOE2(3)      <---------MYB52(2)<---------AHL20(2)  <-----------GT1 ----------->GT1 --------->MYB46(2)   aaggtatgcttctactctaactaacaatcttttttaaaaaaattagacctctggaattttcactatcataggacgattaaaaaaaaagttaggcaaaatg  5073800  Previous    Next  AGI:  At3g15070.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G53190.1); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G53190.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO39354.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 5070141    to: 5073324    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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