Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->AHL20(1)   <---------RVE1(1)              <----------DOF2                         <---------AHL20(2)  --------->ARR11(3)       <---------RVE1(1)                              --------->AHL20(2)  --------->AHL20(1)      <---------ARR14(2)                             --------->AHL20(2)   <---------AHL20(1)      <---------MYB52(1)                   --------->At4g35610            <---------ARR11(3)      --------->ARR14(2)                   <---------At4g35610<---------AHL20(2)     <---------RAP2.6(3)                  --------->ALFIN1 --------->AHL20(1)                      --   <---------ANAC46                      <---------ZAT14  --------->AHL20(2)                       -- ---------RAV1(1) <-----------GT1        --------->ZAT18  <---------AHL20(2)          <---------ALFIN1 --->TEIL  <---------AHL20(2)           --------->ALFIN1 <---------AHL20(2)<---------CCA1(1)  <------   atgttgccgatattttctttaaacctctgcaagagctagagggtgtgctggagaaaaaaattattttatggagaaagatattttagtcacacattttcac  5049900                                                                                              -------                                                                                         <---------ICU4                                                                                        <---------YAB1                                                                                        --------->ICU4                                                                                     <---------YAB1                                                                                 --------->YAB1                                                                                 --------->AHL20(2)      <---------MYB59                                                            <---------AHL20(2)   <-----------GT1           --------->ARR14(2)                               --------->YAB1<-------- ---->MYB46(1)               ------->TEIL                                    --------->AHL20(2) ---->MYB83                  <---------ARR14(2)                              <---------AHL20(2)------ -----GT1       --------->ZAT6    ---------->ID1<----------DOF2             --------->AHL20(2)-------   caaattgaccttacaataactctaaaatacgaatttgcccctatgtttagctttggaatatttcatatttgtaaaccatttaataatatgattattacca  5050000             <---------ARR11(3)             --------->ARR11(3)          <---------AHL20(2)                          --------->ATHB12   <---------ZAT6                                    <---------YAB1                 <---------ANAC58 ----------->GT1                              <---------DAG2                        <---------ANAC58 ---------->AG                                <----------DOF2                     --------->ARR11(3) ---GT1   --------->AHL20(2)          --------->AHL20(2)                          <---------AHL20(2) --------->AGL15                      <---------AHL20(2)                <---------bZIP60(1) ---------->AGL1                     --------->YAB1<-----------GT1      --------->bZIP60(1)   atttagtgaaaataaaatcttcagtcttctcttcttgtataaaaatagcttttttatcatttgaaaacagagtaatgtcactaatttcttggcgaaaatg  5050100                                                                  --------->LBD16                                                             <---------SPL7                                                   <------ZmHOX2a(2)                                                  <---------ARR11(3)       <---------At4g35610     <-               ----------->GT1                    --------->ARR11(3)  --------->ARR11(3)    <--------              <---------TOE2(3)                 ----------->ARR10<---------ANAC46    --------->ZAT14<              <---------TOE1(3)            <---------YAB1  <---------------AtSPL3    <---------ZAT14- <---------AHL20(2)                     ------->TEIL<-----------RAV1(2)<---------GLK1(1) <---------MYB52(1)   tgtttatttgtaacttaaggtaaaataggggcaattttgttgaatctgataagatcagggggtagtaccgtagatttcgctgtccagttcagttatgaaa  5050200 --------ANAC55(2)                                                                       <---------TOE1(2) -YAB1                                                                      <-----------GT1 ---------MYB59                                                 *TSS<---------At4g35610 --------->STY1(1) -------->TOE2(3)--------->YAB1 <-----------GT1                <---------At4g35610      ------>ZmHOX2a(1)   tacctaaaatgccctcgactcataatctactattaaaccctcataaaacccttgatttcatttctagctcatctgttttcacactctctcctagggtttt  5050300                               <---------ANAC46                               --------->ANAC58               --------->MYB52(1)                   --                               --------->ANAC58              <---------SPL7                        <-                              <------NtERF2                  ------>NtERF2                      <----                              --------->ATERF1(1)            <---------RAP2.6(3)                =====                             <---------ATERF1(1)            --------->ETT(2)               --------->ANAC46                             ------>NtERF2                  --------->DEAR3(1)             --------->ANAC58                            <---------DEAR3(1)              ----------->HVH21           --------->ZAT14                            <---------RAP2.3(3)        <----------DOF2      <----------DOF2--------->ANAC58                       <---------AtLEC2     --------->HSFB2a(2)--------->DEAR3(2)       <---------REM1(2)                  <---------At4g35610       <---------HSFB2a(2)--------->SPL7  <---------ANAC58<-----                 <---------ARR11(3)        <-----------GT1 --------->DEAR3(2)  <---------ANAC58------            <---------ATHB12<---------RAP2.3(2) <------ZmHOX2a(2)      <---------ARR11(3)  --------->ANAC55(2)   atctgcgaagcccaatctagagcttccatggcgacgcataccatttctcgatccattctttgccgaccggcgaaatctctttcgtttctgttcacgcgat  5050400                                                                                                <----                                                                                                -----                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              <------                                           <---------At4g35610                                <------                               <---------ATERF1(1)                       <----------DOF2      <------                         --------->ARR14(2)<---------ZAT14               <---------DAG2      <------NtERF2           --------->At4g35610 --------->LBD16       --------->PCF5    ------>NtERF2         --------           <---------At4g35610 ------>NtERF2        <-----------HVH21--------->RAP2.3(1)     --------        --------->At4g35610   <---------DEAR3(1)   <---------DEAR3(2)<------NtERF2          <--------        <---------At4g35610   --------->ANAC46---------->CDC5        --------->ATERF1(1)   <---------DEAR3(1)        ----------->RAV1(2)  <---------LBD16  <-----------RAV1(2)    --------->DEAR4(2)    --------->ALFIN1      --------->REM1(1)  <---------ARR14(2)--------->At4g35610      <---------RAP2.3(1)   --------->LBD16 ---->ZmHOX2a(1)         <-----------ARR10 --------->ZAT2           <---------ATERF1(1)  <---------ANAC46 ---------DOF2          <---------CCA1(2)  <---------ZAT2<-----------HVH21               <---------ANAC58 --ZmHOX2a(2)      --------->ANAC58        --------->ZAT14   ------>ZmHOX2a(1)  ------>ZmHOX2a(1) ======================HOX2a_HOX2a------>NtERF2 <---------ZAT2   <-----------HVH21  <---------MYB52(1) ----ARR14(2)      --------->ANAC58<------NtERF2<---------At4g35610<---------DEAR3(1)    <---------ANAC58 --->ARR14(2)   ------>ZmHOX2a(1)<---------ANAC46  <---------ATERF1(1)--------->DEAR3(1)<---------LBD16   cctttgcttcatctgctcctctcgccaaatctccggcgtcttctctgctcagccggtcccgtcctctggtcgccgctttttcctccgttttccgtggcgg  5050500       <-----------HVH21 --NtERF2 ->NtERF2 >NtERF2 ----RAP2.3(1) ---ANAC46 ---RAP2.3(3) ---RAP2.6(2) -->ATERF1(2)                                                                                  ------ ---ATERF1(2)                                                                            ----------->ARR10 ---DEAR3(1)               <---------ATERF1(1)                                       <------ZmHOX2a(1) ---RAP2.3(2)              --------->ANAC58                   --------->ZAT2         ==============HOX2a_HOX2a ---ANAC58                 --------->ANAC58                   <---------ZAT2    --------->AtMYB61 ---ANAC58---------->DOF2<-----------RAV1(2)            --------->ARR14(2)    ------>NtERF2 <------ZmHOX2a(2) ->ATERF1(1)           --------->ANAC46                 <---------ARR14(2)--------->ANAC58 --------->ARR14(2) ->RAP2.6(3)  <---------ARR11(3)                --------->MYB46(3)        --------->ANAC58 <---------ARR14(2) -ATERF1(1)   --------->ARR11(3)--------->REM1(1)      <---------GLK1(2)  --------->ANAC46 --------->ARR11(3)   ccttgtgtctgtcaaaggtctctcgacgcaggctacatcgtcttctctgaacgacccgaatcccaactggtcgaacaggccacctaaggagacgatcctg  5050600                                             <-----------RAV1(2)                                           --------->AtMYB61                                          <---------ZAT2                                          --------->TGA1a                                          --------->O2                                       --------->ATERF1(1)                            ---------->ID1--------->bZIP60(2)                        <---------ANAC46  ==============MYC_MYB                    --------->REM1(1)                 --------->ZAT18      <---------ATERF1(1)                         <-------TEIL                 --------->ZAT14     --------->TCP16(1)                    --------->YAB1               --------->HSFB2a(2)   --------->TCP20                   -------->ATHB1              <---------ANAC58    --------->ALFIN1                     --------->ATHB12    <-------GAMYB<---------ZAT14<---------ANAC46  --------->ALFIN1     <---------ICU4    ================================================MYC_MYB           <---------ATHB12   --------->MYB55(2)   <---------ANAC58 ------>NtERF2 --------->ZAT18<---------YAB1            <----   <---------MYB46(3)   <---------ANAC58<---------ALFIN1              --------->ICU4--------->TOE2(3) >ZmHOX2a(1)  <---------ANAC58 <------NtERF2 ---------->CDC5   XXXXXXXXXXXXXXXXXXXX>MIR1886.2   -----   ctcgatggttgcgatttcgagcactggcttgtcgtcgtggagccacctcagggtgagcctactagagatgaaatcattgatagctacatcaaaaccctag  5050700                 <---------ARR14(2)                 --------->ARR14(2)               >>>>>>>>>GT-1            --------->ANAC58            ----------->GT1            <------MYB83                                                        ----------->GT1            --------->ANAC58                                                   <---------TOE2(3)            <------MYB46(1)                                                    <---------TOE1(3)    <---------MYB46(3)                                                         --------->MYB59  <---------GLK1(2)  --------->LBD16                                 --------->HSFB2a(2) -----ZAT2  --------->At4g35610                                      <---------HSFB2a(2)        ----- ---->ZAT2<-----------RAV1(2)                               ------->TEIL   <----------DOF2      <----   ctcagattgttggcaggtaaatccccaattcaaaactctctctctctctctctctctctgtgtatgttcttctagggattttaggttaaataagtgagaa  5050800  Previous    Next  AGI:  At3g14990.1    Description:  4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative. similar to DJ-1 family protein [Arabidopsis thaliana] (TAIR:AT1G53280.1); similar to ThiJ-like protein [Brassica rapa subsp. pekinensis] (GB:AAP96742.1); contains InterPro domain DJ-1 (InterPro:IPR006287); contains InterPro domain ThiJ/PfpI (InterPro:IPR002818) Range:  from: 5047407    to: 5049884    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g15000.1    Description:  Identical to Uncharacterized mitochondrial protein At3g15000 [Arabidopsis Thaliana] (GB:Q9LKA5); similar to plastid developmental protein DAG, putative [Arabidopsis thaliana] (TAIR:AT3G06790.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO39382.1) Range:  from: 5050264    to: 5052439    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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