Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                  ---                                                                        --------->ARR14(2)        <--                                                                        <---------ARR14(2)        ---                                                                    <---------At4g35610         -----                                                              --------->At4g35610               <----                                                              <---------LBD16                   <----                                                           ---------->DOF2                      -----                                                         <---------------AGL15                 ------         --------->ANAC46                               ----------------->AGL2                 <----- ----->ICU4                                             ----------------->AG          --------->AHL20(2) ------YAB1       ---------->DOF2      ------>ZmHOX2a(1)----------------->AGL1    ----------->GT1<---   tgaataaactcacagaacccaaaagtttggaactcgacatcctaatccaaaacacatacccataagcggaagcggattcaaaacaagataaaatcagaga  5045000         <----------ID1      ---------->DOF2   <---------HSFB2a(2)   --------->HSFB2a(2)   <---------HSFC1(1)   --------->HSFC1(1) ----->ZmHOX2a(1) ------>HSFC1(2) -------HSFC1(2) --->ZmHOX2a(2)                                                          --------->ICU4 ---->ARR14(2)                                                           <---------YAB1 -----ARR14(2)                                                         <---------ICU4 -----ARR11(3)                                                         --------->YAB1 ---->ARR11(3)                                                        --------->ICU4 --->GLK1(1)                                                     ----------->GT1                 ---- ----GLK1(1)                                              <------------CBF    <---------ICU4  ------- ---ZmHOX2a(2)    <----------DOF2                --------->GLK1(1)    <---------YAB1      ---------->DOF2   tccttctagaaaggccaaaactttgaagcctagagcaaaacgatagaccagatttcatgaaattgagatgttataatgactaattacatccaaaaagaaa  5045100                                                   ----------->GT1                                                 --------->At4g35610                                                 <---------ZAT14                                    -     <------------CBF                            --------->ZAT14                                   --    --------->DAG2              --------->AtLEC2 <---------At4g35610                               -- ----->At4g35610   <------ZmHOX2a(1)             <---------ZAT2       <---------ANAC58           <--- --->DOF2   --------->GLK1(1)--------->ZAT2      --------->ZAT2       <---------ANAC58           <---   gctcaaaaattgggaaatgcaggacattaccagcatgcagaatgaaatcagagctgtgaaatcggagaaatggcttcttctcactgaaatagactcattt  5045200                         --------->ALFIN1                       <---------TGA1a                    --------->LBD16                   --------->ANAC58                   ==============MYC_MYB                   --------->ANAC58           ------>ZmHOX2a(1)  <------NtERF2    --------->ANAC46 ------>NtERF2   ------>MYB83 -------->DEAR3(1) ------->GAMYB--------->ANAC58                     <---------ALFIN1 -------->ID1    -------->P  --------->ARR14(2)             <---------ZAT18 ------->ATERF1(1)--------->MYB46(3)   <---------YAB1       --------->ZAT14 ------ANAC58    ================MYC_MYB                    <---------ZAT14           ------>ZmHOX2a(2) ------ANAC58    ------>MYB46(1)--------->ANAC58  <-----------GT1  <---------ALFIN1 <---------ARR11(3)   cgtcgcccttatcctctccaaccgcaagtgggaaacgcattttcattccatttcacgttctctgcactcacacactctctctccttgatctctatctcac  5045300                                          --------->ATHB51                                          --------->YAB1              <---------ANAC46                                 =====================================bZIP_DOF                   <---                                 <----------DOF2            --------->TGA1a                   <------                                 <---------DAG2             ====================================MYC_MYB                             <-----------GT1               ------>MYB83                 ------->GAMYB                         =============================================bZIP_DOF          --------->TOE2(3)                         <----------DOF2 <---------YAB1   <---------ALFIN1              --------->YAB1   ---------->DOF2   <---------CCA1(2)   <---------AHL20(2)------>MYB46(1)             --------->MYB46(3)   acacagaaagaacaacaatttgtctatctttttagctttttctataattgtggaagaaacccacctctgattcggtgttaaatctctcaaccaaaattca  5045400                                                                           <---------ZAT14                                                                         --------->REM1(2)                                                                    --------->ALFIN1<------------CBF                                                                <---------ZAT14    --------->ATHB12                                        <---------At4g35610   <---------ZAT14      --------->ATHB51          *TSS              <-----------GT1                   --------->ZAT18     <---------YAB1     >>>>>>>>>GATA-1 <---------DAG2    --------->ARR14(2)     <---------ZAT18   <---------ICU4   ----------->GT1   <----------DOF2   ------->TEIL     <-----------RAV1(1)<---------ARR14(2) ------At4g35610   ------->TEIL        <---------ARR14(2)     --------->ZAT14  --------->ICU4 -TEIL --------->AHL20(2) <-----------GT1             <----------DOF2 <---------ANAC46          <----   tcagatagataaattctgacgaactttttttcacctctctgaatctgcctctatcactttgttgtgcacagtgtgtgtatacttattattggctatttct  5045500                                                <-----------------AGL1                                             <-----------HVH21                                            <---------bZIP60(1)                                            --------->bZIP60(1)                                          <---------At4g35610                                        --------->ZAT18                                       <---------ANAC46                              --------->HSFB2a(2)                         <----------DOF2<---------ZAT14                      <-----------GT1  <---------ANAC58                     <---------AHL20(1)                 <----------DOF2       <---------ANAC58                     --------->AHL20(2)               ---------->ID1 <---------------AGL15         <---------HSFB2a(1)          <------------------------ANAC81 --------->At4g35610   <---------ANAC46  <-----------GT1 <------------------------ANAC81 --------->AHL20(2)   --------->DAG2        <---------AHL20(2) ------DOF2   <-----------GT1 <---------HSFB2a(2)    ---------->DOF2    <---------AHL20(2)          -   ttctcttctcgttttttttctttttttcttttctataaattgtgtgctgtcaccaaaaaggcatcttcgtgtttttattttatttttccttcgttatact  5045600                             --------->GLK1(2)                            <---------GLK1(2)                            --------->ARR11(3)                             <---------------AtSPL3                          <---------YAB1             ------->GAMYB         <---------------AtSPL8                      <---------DAG2                --------->MYB46(3)     --------------->AtSPL8                      --------->TOE1(3)             <---------MYB52(2)<---------ARR14(2)                      --------->TOE2(3)           --------->MYB52(1)  --------->ARR14(2)    --------- --------->DAG2    <-----------GT1          --------->YAB1      --------->YAB1              <-------- --------->DOF2  <-----------GT1       ------>ZmHOX2a(1)  ----------->RAV1(1)          <-------TEIL   gaaaaagtcattcttcatttttcaccttaagattctgtctcctctctgataacaacggaccagcagttatagtatatggagtacttaaattcgtttaatt  5045700                                                                                 --------->ANAC46                                                                            <---------YAB1 --------->YAB1                                                                       <---------CCA1(2)   <---------ICU4                                                                     ------>ZmHOX2a(2)   <---------AHL20(2)                                                                    <------ZmHOX2a(2)    <---------YAB1                                                        ------>ZmHOX2a(1) --------->ZAT6--------->TOE2(3)                                                        ===================HOX2a_HOX2a--------->ICU4     --------->AHL20(2)  <---------MYB52(1)             ====================HOX2a_HOX2a --------->YAB1 >AHL20(2)            ---------->ID1            --------->TOE2(3)<---------YAB1  --------->ANAC58 -AHL20(2)     --------->ARR14(2)            <---------GLK1(2) --------->YAB1    --------->ANAC58  <-   acacaaattaaaacccaaatattcgtcgtttttttcttctgttatcaaattcttaatcctgttaatgacgatcgtatcactataagccaatattaatgac  5045800                                         ----------->RAV1(1)                                      --------->ANAC58                  ------->GAMYB         <------         <---------ARR11(3)           --------->ANAC46               --------->MYB52(1)       -------         --------->ARR11(3)           --------->ANAC58            --------->YAB1            --------- --------TOE2(3)             <-----------GT1               ----------->HVH21         ----------->GT1   tatggttttaagttcttgacaaagtttttttttactaaattcgccacagacaaaaactgttctgacaaaaataacagacaaactaaaatgaaaaaaaagg  5045900  Previous    Next  AGI:  At3g14980.1    Description:  PHD finger transcription factor, putative. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G05380.2); similar to DNA binding [Arabidopsis thaliana] (TAIR:AT1G05380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39386.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain GCN Range:  from: 5039938    to: 5045410    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g14981.1    Description:  unknown protein Range:  from: 5045117    to: 5045335    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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