Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------At4g35610                                               --------->At4g35610             --------->LBD16                                               <---------ZAT2                 --------->LBD16                                               --------->ZAT2                <---------LBD16    <----                                           ------->GAMYB               --------->AHL20(1)   ------>MYB46(1)                                        <---------ARR14(2)             <---------AHL20(2)   =========               <----------DOF2          --------->MYB52(1)             <---------AHL20(1)   -------->P       --------->MYB52(1)               --------->ARR14(2)            --------->YAB1        ------>MYB83    --------->ANAC46                 <---------ANAC58                 --------->AHL20(2)  <---------ALFIN1    --------->ANAC58                 <---------ANAC58                <---------YAB1       <---------MYB111(2)    --------->ANAC58 <-----------GT1---------->ID1        <---------YAB1<----------TaMYB80<---------MYB111(1)   gtttcgacgaaacagagcttttattaccagatggttttgtcgtaaccgaagctgagtttgatgatggtcttattatattcccggttttagcaccaacttg  5032500            <---------WOX13(1)          --------->ATHB12        ------->PIF5        <-------PIF5        <-------MYC2        ------->MYC4        <-------MYC4        ------->MYC2        ------->PIF4        ------->MYC3                                 <---------DEAR3(1)        <-------PIF4                                 --------->ALFIN1        <-------MYC3                                 <---------ANAC46                         <------NtERF2       --------->ANAC46                             --------->ATERF1(1)                     <--------       --------->ANAC58                             <---------LBD16                        --------->At4g35610       --------->ANAC58                             <------NtERF2                          ------>NtERF2       <---------TGA1a                            <---------RAP2.3(2)                      <---------LBD16       --------->ANAC55(2)                       <---------At4g35610                     <---------RAP2.3(2)       <---------ANAC55(2)                 ------>MYB46(1) --------->ALFIN1              <---------RAP2.6(2)       --------->TGA1a                 ------>MYB83<---------RAP2.3(1)                   <---------DEAR3(1)     <------------OsbHLH66           --------->MYB46(3)   <------ZmHOX2a(1)             <---------LBD16 <---------ANAC46                    <---------MYB55(2) --------->ALFIN1               <---------ANAC58 <---------ANAC58   ------->PIF5   --------->PCF2--------->At4g35610                   <---------ANAC58 <---------ANAC58   <-------PIF5 ----------->HVH21<---------DEAR3(1)               <---------ARR11(3) -----WRKY18(1)   ------------>OsbHLH66------>MYB46(1) --------->ATERF1(1)         --------->ARR11(3) ================MYC_MYB  <------ZmHOX2a(1)------>MYB83<------NtERF2        <----------DOF2<------NtERF2   actgcttgcacgtgattgagcacgggcaggactatatgacccaccaaattgagcggcggaggagggagtagtactagactttgaagatttcgcggcggaa  5032600                                               --------->ARR14(2)                                   <                                               <---------ARR14(2)                                   -                                               --------->GLK1(2)                                    <                                              <---------GLK1(2)   <---------LBD16          ----------                                           --------->ANAC46       --------->LBD16         <----------                           <------NtERF2<---------SPL7   <---------ANAC58              <---------ANAC46                         --------->ALFIN1  --------->ANAC58      <---------LBD16     <---------WRKY18(1)                         <---------ANAC46--------->MYB52(1)     <---------LBD16     ----------->HVH21      <-----------------AGL2    --------->MYB52(1)       <---------ANAC46       --------->LBD16   <--   <---------WOX13(1)    <---------DEAR3(1)--------->ANAC58  ----------->HVH21 --------->ANAC46  ---- -ANAC46                <---------LBD16----------->HVH21 <---------ANAC58     <---------LBD16    <---   gagagattgctagatttagacttagaggcggagggaacgggctgaacggaatctggttttcttgtaaccgggggagtatgtccggcatgacctgtgaccg  5032700      --------->ARR11(3)                                                                         ---- --------->LBD16                                <---------At4g35610                              ---- -----------RAV1(2)                             --------->ZAT2                                   ---- -------->HSFB2a(2)                             <---------ZAT2                     <------ZmHOX2a(2) ---------HSFB2a(2)                             ----------->RAV1(2)               --------->ARR11(3) ->HVH21    <<<<<<<ZML2                         --------->At4g35610               --------->ARR14(2) -HVH21     <---------AGP1               <---------ZAT18                          <---------ARR14(2) ----ZmHOX2a(2)                          --------->ZAT18                          <---------ARR11(3) ----->ARR14(2)                          --------->ZAT14             <---------WOX13(1)    --------->YAB1 ------ARR14(2)       --------->MYB52(1) <---------ZAT14      ----------->GT1------>ZmHOX2a(2)   <---   atccagaagagctagaactgaaactactggtggaagaagagagtccactcggctgagtctgaagcggtgtaattggtgatccaagatcgacattaatagt  5032800             <---------YAB1         --------------------->WRI1                               --------->GLK1(2)        --------->ATHB12                                         <---------GLK1(2)        <---------ICU4                                         ----------->ARR10        --------->YAB1                                  <---------ALFIN1       <---------YAB1                                  <------NtERF2 ----------->GT1                                      ------>NtERF2                   <---------At4g35610 ----->ARR14(2)                                      --------->DEAR3(1)               --------->At4g35610 ----->ARR11(3)   <---------ARR11(3)          <----------DOF2<---------MYB52(1)  <---------ANAC58 ----->GLK1(2)    --------->ARR11(3) ----------->HVH21----------->RAV1(1)        <---------ANAC46 ------ARR14(2) <---------YAB1      <-----------HVH21----------->HVH21           <---------ANAC58   atctggtttatcattgttattatcttccatattcaacgagtcacagagcttatcggcgacacagttagattctagtataggtttcttgagcttcgacatt  5032900                                                <---------MYB52(1)                                                --------->DOF5.7(2)                                               <-------GAMYB                                               --------->At5g28300                                             <-----------------AGL2                                        <---------ICU4                                --------->YAB1<                                        --------->YAB1                               <------ZmHOX2a(2)                                       --------->ICU4                               --------->ARR11(3)                                  <---------ANAC55(2)                               <---------ARR11(3)                                  --------->ANAC55(2)     <---------ARR14(2)       <------ZmHOX2a(1)-                                <---------GLK1(1)         --------->ARR14(2)     <XXXXXXXXXXXXXXXXXXX                               <---------ARR11(3)      <---------ANAC46 --------->ANAC58         <---  ------->TEIL                 --------->ARR11(3) <---------DOF5.7(2)   --------->ANAC58      ------- <---------CCA1(2)   ---------->DOF2   <---------YAB1 <-----------------------TaNAC69(2)<---------YAB1   gttgtatcttagcaagattacaaaaaagaataagatacctgatgatgaccgttaatggcgaatacaaggtagagacgaaactgtaggatcataaatattc  5033000                                       ------>ZmHOX2a(2)                                     <---------AGP1      <---------AtLEC2               --------->ARR11(3)   XXXXXXXXXXXXXXXXXXXX>MIR161.2     <---------ARR14(2) ---------YAB1                       --------->ARR14(2)                       ---------->DOF2 ----------->CBF                     <---------ARR11(3)                 ----------->GT1 XMIR172C/D                         <---------CCA1(2)                  ------------------------>ANAC81 ------YAB1                     <------------CBF                  ---------->DOF2          ---------- -->GLK1(2)                    --------->ATHB12       <------------CBF---------->DOF2 ----------->GT1   tgatcaatgcatggaaaatgagagagaatagaaagattggatcttgcgatgtcgaagattgaattcagaaaagaaagaaaaaaagagagagagaaaagtt  5033100                                                                                               ------                                                                                       <---------AHL20(1)                                                                                       <---------AHL20(2)                                                                                       --------->AHL20(2)                                                                                    --------->AHL20(1)                                                             <---------AHL20(2)    <---------AHL20(2)                                                            --------->AHL20(2)     --------->AHL20(2)                                                            <---------AHL20(1)    --------->AHL20(2)                                   <------ZmHOX2a(2)        --------->AHL20(1)    <---------AHL20(1)                                  --------->ARR11(3)     --------->AHL20(2)       <---------AHL20(2)                                  --------->ARR14(2)     --------->AHL20(1)    --------->AHL20(1)                                  <---------ARR11(3)     <---------AHL20(2)    <---------AHL20(2)                      <------ZmHOX2a(1)                 <---------AHL20(2)     --------->AHL20(2)                      ====================HOX2a_HOX2a   --------->AHL20(2)    <---------AHL20(2)                     <------MYB83 <---------ARR14(2)  --------->YAB1      --------->AHL20(2) <-------                     <------MYB46(1)       ----------->HVH21<---------AHL20(2)--------->AHL20(2)   -- >DOF2             <--------P   ----------->ARR10   --------->AHL20(2)    <---------AHL20(2) <-------   tcagagaagaatagaagagaggtaggagacgaagaagatcagcgagtgacacaaaaaaataatttaatatgtgagtttaattaaattattttatttcatg  5033200                                                                                   --------->YAB1                                                                                   <------ZmHOX2a(1)                                                                                 <---------TOE1(3)                                                                    <---------ARR11(3)                                                                    --------->ARR11(3)        ---------->DOF2            <-----------GT1                 --------->GLK1(1)   <---------AHL20(2) --->AtLEC2                       ---------->ID1                   <---------GLK1(1)  --------->AHL20(2) --ANAC58 ----------->GT1  <---------TOE2(3)                     <------ZmHOX2a(1)----------->GT1 --------->RAV1(1)    <----------DOF2                   --------->TOE2(3)        <---------TOE2(3) --ANAC58--------->DAG2    <---------TOE1(3)         ----------->RAV1(1)        --------->YAB1   ccaacaaaaaaaaagtgatttatacttttatggtttgtcacattactatgtaatacaacattaagtaggaaatcttatactataaggataaaattaagtt  5033300                              <---------WOX13(1)                             <---------ANAC58                                                    <---                             <---------ANAC58                                              <---------GLK1(2)                       <---------YAB1   --------->ARR11(3)                                 <---------ARR11(3)                      <-------GAMYB <---------At4g35610 ---------->ID1                 --------->ANAC46                     --------->MYB111(2)<---------GLK1(2)       ---------->ID1       <-----------GT1                     <---------MYB46(3) <---------ARR14(2) <----------DOF2      <---------GLK1(2)<---             <---------YAB1 --------->ATHB12     <---------AHL20(2)         ---------->DOF2--------->ARR11(3)   cgattttaagagaacattataggttgttattgattgtcatcagattttggtttaatttgttcttttgttgttatttgtaaaagaatttcacgagattttg  5033400  Previous    Next  AGI:  At3g14950.1    Description:  TTL2 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 2); binding. similar to TTL1 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 1), binding [Arabidopsis thaliana] (TAIR:AT1G53300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39389.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Range:  from: 5030223    to: 5032899    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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