Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)                                                                                      <---------AGP1                                                                          <---------AHL20(2)                                                                         <---------AHL20(2)                                                                         --------->ARR11(3)                                                                         <---------ARR11(3)                                                                         --------->AHL20(2)                                                                         <---------AHL20(1)                                                                   <-----------GT1    --------->ARR11(3)                                                                ----------->GT1       <---------ARR11(3)                                                              ---------->DOF2         --------->AGP1                                                           --------->HSFC1(1)      <---------WOX13(1)                <-------TEIL                               <---------HSFC1(1)    --------->YAB1          ---------->DOF2     <---------YAB1               --------->HSFB2a(2)  <---------YAB1       <----------DOF2  <---------ATHB12                   <---------HSFB2a(2)--------->YAB1  <----------DOF2   --------->MYB46(3)               <---------GLK1(2)   --------->AHL20(1)      <---   atagctttgctttaaagattcaaccaatagtttttattctatacgttttgctatggattttctagaaagtaacaatatatttatgatagatcttacatta  5017900                                                                                --------->ZAT14                                                                           <-------TEIL                                                                         <---------ARR14(2)        ------->TEIL                                             ------>ZmHOX2a(2)       --------->GLK1(2) <---------AHL20(2)                                           --------->ATHB12  ---------->DOF2   --- --------->AHL20(2) --------->ANAC58                          --------->YAB1    <---------ZAT14 <---- ------YAB1         --------->ANAC58                         <---------ATHB12----------->GT1 <-------   taaataaatgtatgtgtttagtaagaaataactcaataagtgtgcatcacaaaactagaatcaatgatcgaaatggatacagtaaagagagaattttgaa  5018000                                  --------->At5g28300                 <---------ARR11(3)           --                                 ----------->GT1                      --------->ARR11(3)           <-                                ----------->GT1                      <---------At4g35610          <--      --------->GLK1(2)       <------ZmHOX2a(1)               --------->MYB52(1)                  <-- ------>ZmHOX2a(2)        --------->REM1(2)  <------------CBF ------>MYB83 <-----------TBP  --------- ====================================HOX2a_HOX2a              ------>MYB46(1)         --------->ANAC58 ------>ATHB12           --------->ALFIN1<------MYB83      <---------ANAC55(2)        --------->ANAC58 -----WOX13(1)       <---------TGA1a     <------MYB46(1)   --------->ANAC55(2)        --------->ANAC46 --YAB1              --------->TGA1a    --------->MYB59  <-----------GT1 <----------DOF2   ----------   tgatcgaaattctcgagtttctcaagtgtgtaggagggtaatttggtcattgtagtatatcacctaatggaagctctttttatattacaaggaatgttaa  5018100         --------->ANAC58     ------>ZmHOX2a(2)  -------->HAHB4  <---------ICU4                                                              ----------->GT1  --------->YAB1                                                      <---------HSFC1(2) --------->ICU4                                                       --------->HSFB2a(1) <---------YAB1                                                       <---------HSFB2a(1) ------->YAB1                                                         --------->HSFC1(2) --------ICU4  --------->YAB1                                  <---------ANAC58                     - -------ATHB51--------->ICU4                                   <---------ANAC46     --------->AHL20(2) -------AHL20(2)       --------->YAB1                          <---------ANAC58 --------->AHL20(2)--- -->GT1  --------->ANAC46       --------->WOX13(1) <---------TOE2(3) --------->ANAC58      ---------- ->GT1   --------->ANAC58   ----------->GT1        <---------TOE1(3) --------->ANAC58--------->AHL20(2)   ataatgatcccaagaaataatcaaatcagcatgttaatcactgactataatgtaaggttttgttttcttggaagcatcttaagtaaataaaaaaaaagat  5018200            --------->ATHB12            <--------HAHB4            <---------ICU4            --------->YAB1           <---------ATHB12           --------->ICU4           <---------YAB1         --------->YAB1         <---------ICU4        --------->ICU4                                                     <-----------HVH21      <---------ICU4                                                       <-----------TGA1     --------->ICU4                                                       --------->ANAC58     <---------YAB1                                                       --------->ANAC46   --------->YAB1                                                 --------->ANAC58                  <  <---------YAB1                                                  --------->ANAC58                 -- -------->YAB1                                      --------->ANAC46      --------->ANAC58       <--- -------->GT1                  <----------DOF2  <-----------GT1 ---------->DOF2                ------ >DOF2--------->YAB1       <----------DOF2  <---------YAB1    --------->AtMYB61        ------>ZmHOX2a(1)   tagtataataataatcattaagagaggctctttctttaaaatcagtttgattaccagacagagaccaaaagcaaaaacgtcatgacttcctctcttcctc  5018300                                                     ------>ZmHOX2a(2)                                                    <------ZmHOX2a(2)                                                   <---------ARR14(2)                                                   --------->ARR14(2)                                                   --------->ARR11(3)                                                   <---------ARR11(3)                                            <-----------HVH21                                            <---------ATERF1(1)                                            ------>NtERF2                                           --------->DEAR3(1)          <---------ANAC55(2)                                          --------->RAP2.3(1)          --------->ANAC55(2)                                          --------->ORA47(2)        ========================HOX2a_HOX2a                                         --------->LBD16  --------->ANAC58                                         <---------ATERF1(1)        <------ZmHOX2a(2)                                         ------>NtERF2    --------->ANAC58         <<<<<<<<<TBF1       <---------ALFIN1--------->ATERF1(1)    ================================= ---------ATHB12            --------->ZAT18--------->RAP2.3(3)     <---------ARR11(3) ------->ANAC46 --------->DEAR3(1)      --------->ANAC46  --------->ANAC46                       ---- ------ALFIN1 <---------At5g28300       --------->DEAR3(1)--------->ANAC55(2)             --------->ZAT14 >ZmHOX2a(1) <-----------GT1<---------ZAT18--------->RAP2.3(2)     --------->ARR11(3)------>ZmHOX2a(1)   cactcatcttcttcttcaccgtcttcttcgtccactctctctccgccgtctccgatcttcacgaaaccagatcacgtttcaaacctcctcagttctctcc  5018400                                                                                              <------                                                                                              <------                                                                                        <---------ZAT2                                                                                        <---------At4g35610                                                                                        --------->At4g35610                         <-----------TGA1                                           <-----------HVH21                         <-----------HVH21                                          ------>NtERF2                        --------->ANAC58                                     --------->ARR14(2)   ---                        --------->ANAC46   --------->ANAC46                  <-----------ARR10-------                        --------->bZIP60(2)--------->ANAC58                  <---------ARR14(2)------                        --------->ANAC58   --------->ANAC58        ------>MYB83    <---------ETT(1)          ------>ZmHOX2a(1)      --------->ARR14(2)                ------>MYB46(1) --------->ANAC46 ===HOX2a_HOX2a    --------->ANAC46    <---------ALFIN1          --------->AtMYB61 ----------->HVH21 -->ZmHOX2a(1)    --------->LBD16<---------ARR14(2)      <-------TEIL       <---------CCA1(2) <------   tctcttcttctcctctcttccccaaaacgtcacaaaatcccctactcgctacttcgaggttcaaaaacctcccgttccaaatctcccgacagctcaacaa  5018500                                                  --------->MYB52(1)                                                 --------->AtMYB61                                                --------->MYB46(3)                                         --------->ANAC58                                         --------->ANAC46                                         --------->ANAC58                                        ------>MYB46(1)                                        ------>MYB83 ---MYB55(2)                          --------->TOE1(2)                 --------->ANAC58          --- ---MYB52(2)               <----------DOF2      <---------MYB55(2)      --------->ANAC46          --- ---->GAMYB       <---------ALFIN1    --------->AtMYB61                 --------->ANAC58          <-- -->MYB46(3)<---------ARR14(2)        --------->TOE2(2)               --------->ANAC46            <-- ->GAMYB    --------->ARR14(2)     <---------ALFIN1                   <---------ALFIN1        ------- ---MYB111(2)   ------>ZmHOX2a(1)  --------->REM1(1)   --------->ARR14(2)                 ------>ZmHOX2a(1)   ccgtgttcgtatcaaatcctccaccatgactttggctacacctacgctaaaccaccggttctctccaattacacactcccctctcactgctcctctcgag  5018600                                                                                <-------GAMYB                                                                               <---------DEAR3(1)                                                                              <------NtERF2                                                                             ------>NtERF2                                                                             <---------RAP2.3(1)    <                                                                            <---------RAP2.3(3)    <-                                                                            <---------RAP2.3(2)    <-                                                                  --------->ALFIN1                 --                                                                 <---------MYB46(3)   <---------GLK1(2)                                 ------>MYB83                    --------->MYB55(2) ----------->ARR10                                 ------>MYB46(1)             <---------DEAR3(1)<---------ANAC46 -----                                --------->ANAC58        ------->TEIL   <---------ANAC58         <----                                --------->ANAC46        --------->ARR14(2)  <---------RAP2.6(2) -----                               --------->MYB46(3)       <---------ARR11(1)  <---------DEAR3(1)  <----                               <---------MYB55(2)       <-----------ARR10  --------->RAP2.6(3) ------ ------>ARR14(2)         <---------ARR14(2)             <---------ARR14(2)--------->MYB52(1)   <----- ------>GLK1(1)<---------HSFB2a(2)   --------->ANAC58   <---------TOE1(2) <---------WRKY18(1)-------- -------GLK1(1)------>ZmHOX2a(1)--------->ANAC58       <---------ARR14(1)----------->HVH21  --------- -------ARR14(2)         --------->ARR14(2)            <---------CCA1(2)<----------DOF2    <---------LBD16 -->HSFB2a(2)  --------->HSFB2a(2)   --------->ANAC58------>ZmHOX2a(2) <---------ANAC58--------->GLK1(2)   aattctccaaaatcgtcctcgaattcaaatccaccagccaaggaagacaattcgatcgtatcttcggtgtttggcttgacggcgttgagattctccggag  5018700       ------>NtERF2      --------->DEAR3(1)     <----------CDC5    --------->ABI4(1)    ------>NtERF2   --------->DREB2C(2)   --------->DEAR3(1)  --------->ORA47(2)  --------->MYB46(3)  --------->ATERF1(1)  --------->DEAR4(2)  --------->DEAR3(2) <---------ATERF1(1) ---------ALFIN1 --------ZAT14                  <------MYB46(1) --------ABI4(2)               --------->MYB59 ------->ZAT14       --------->ANAC58 ---->ZAT2           --------->ANAC46 -----At4g35610      --------->ANAC58 ---->At4g35610    ------>MYB83<---------AtMYB61                      <---------ANAC58 -----ZAT2         ------>MYB46(1)         ---------->DOF2        <----------DOF2           --------- --->ARR14(2)      --------->MYB52(1)   <---------HSFB2a(2)     <---------DAG2             <---------ARR14(2) ----ARR14(2)     --------->MYB55(1)    --------->HSFB2a(2)  <-----------GT1               <---------GLK1(2) ->LBD16         --------->AtMYB61     <---------ETT(2)   --------->YAB1                   --------->ARR14(2) >ANAC46         <---------MYB59<------MYB83      ----------->HVH21   <---------ANAC58   ----------->ARR10   ctgcaccgccgagcctagaccaaacggaattgtttggtctgtcgagaaagatgtgaccaagtatcactctttgctcgtcaaaaacgagactcagattctc  5018800  Previous    Next  AGI:  At3g14910.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO39401.1); contains domain PTHR12472 (PTHR12472) Range:  from: 5015433    to: 5017812    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g14920.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G05480.1); similar to Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (PNGase A) (Glycopeptide N-glycosidase) (N-glycanase) [Contains: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A light chain (PNGase A small chain) (PNGase A subunit B); Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A heavy chain (PNGase A large chain) (PNGase A subunit A)] (GB:P81898); similar to unnamed protein product [Vitis vinifera] (GB:CAO39400.1) Range:  from: 5018282    to: 5020280    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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