Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------AHL20(1)           <---------ARR11(3)           --------->ARR11(3)           --------->AHL20(1)        ------>MYB46(1)        ------>MYB83      <---------MYB59    ------>MYB46(1)    ------>MYB83   --------->ORA47(1)                                                              --------->ATHB12  ------->GAMYB                                                                   <------ZmHOX2a(2)  --------->DEAR3(1)                  <-------TEIL                           <---------LBD16 --------->MYB46(3)                 <---------PCF2                 ======================HOX2a_HOX2a --------->DEAR3(2)               <---------MYB46(3)      --------->DAG2     --------->YAB1 ------>MYB46(3)              ----------->HVH21    <----------ID1  ------>ZmHOX2a(1) ---->HSFB2a(2)      --------->AHL20(2)           xxxxxxxxxxxxxxxx>smallRNA(i)  <------ZmHOX2a(1) ---->ANAC46      <---------At4g35610>>>>>>>>>>>>>>>>>LFY---------->DOF2 <---------AHL20(2)   acaaccgaccaaatattttcagataatatactctgatgggtccattgtattttgggccaaaaagcagtcctctattttatcaggatcagtgggaattgac  5006200                                              ------>MYB46(1)                                              ------>MYB83                                             --------->ANAC46                                             --------->ANAC58                                             --------->ANAC58                             <----------                                         ------>MYB46(1)          <---------YAB1------------>CBF                                         ------>MYB83 <---------At5g28300      >>>>>>>>>>>>>>>>>LFY--                                       --------->AtMYB61 ----------->RAV1(2)--------->RAP2.6(3)  <---                              --------->MYB52(1)     <-----------GT1       --------->MYB52(1)    ---- <---------MYB52(1)      <---------YAB1<---------MYB59<-----------GT1 <-----------GT1   <---------AHL20(2)   tcggttttgttctacttgtaatgggttatgacaaactgagaccaaaccagccattttacccctgcattcttattacaaaacggccaatgttatattgtca  5006300                                                                                          <---------WRKY18(1)                                                                                         --------->WRKY38(1)                                                                                         ----------->HVH21                                                                                         --------->WRKY12                                                                                         --------->WRKY45                                                <------------CBF                     <---------YAB1                                          ---------->DOF2                        <----------DOF2 --CBF                               --------->ANAC58                       <----------DOF2 ----->GAMYB                         --------->At4g35610           ----------->GT1  <---------ARR11(3) ------At4g35610                     --------->ANAC58              <----------ID1<---------DAG2 ----->At4g35610     --------->ZAT14------>NtERF2              ---------->DOF2<-----------GT1   -----   actgaaatagttgagaaatacagtttacaaaaatttggcacctaaaaagagattgaaacattctacaaagcgataaaactttactttatctttgaccgga  5006400                 <---------HSFB2a(2)                                           <------MYB83                 --------->HSFB2a(2)                                           <------MYB46(1) <-----                 <---------HSFC1(1)                                            <---------DEAR3(2)     --------->YAB1             --------->AHL20(2)       ------->TEIL    ---------->DOF2       ------     --------->ATHB12       <------ZmHOX2a(1)            <---------TOE1(3)    <---------DEAR3(1) --------->AHL20(2)       <---------TOE2(3)    --------->YAB1         --------->YAB1         -------- <---------AHL20(2) <---------GLK1(2)     --------->AHL20(2)     ------------>CBF          ---------- ------->CBF     --------->HSFC1(1) ----------->GT1     <---------DOF5.7(2)   <---------DREB2C(2)----   caataaatgataggcatttctagaattttaggaaaaaaatgaaaaaaaatcaaaatgtgaacgttgatacaataagaaagtcggtgaacaaaaaaaagat  5006500   ---------->DOF2                       ------>MYB46(1) ----------->TBP                       --------->AtMYB61 ----ARR11(3)                  <---------MYB46(3)   <---------LBD16                                -- --->ARR11(3)               <------------CBF       --------->MYB52(1)                              -- --->GT1                 <---------AHL20(2)     --------->ZAT6                                     -- >DOF2 --------->YAB1 --------->AHL20(2) ------>MYB83                                       --------- ----->AHL20(2)  ------------>CBF     --------->MYB46(3)  <------ZmHOX2a(1)                 ---------   aatataaaagcataatatagacaatataaaaattggttcgaccatcccaaacactacggaggacccaaaatatgagccaagagacagcgatagcaagctt  5006600                                                     --------->At4g35610                                                     <---------At4g35610                                       --------->At4g35610--------->LBD16                                       ----------->RAV1(2)------>NtERF2                                    --------->MYB46(3) <---------ATERF1(1)                        ---                               --------->ANAC58     <---------ALFIN1              <---------At4g35610                               --------->ANAC46  --------->AtMYB61                --------->At4g35610            <-----------HVH21  --------->ANAC58  <---------ALFIN1            --------->GLK1(1)    <--           ------->GAMYB   <---------At4g35610   --------->DEAR3(1)          <---------GLK1(1)   <--- <---------ARR11(3)        --------->ZAT2       --------->ZAT2            --------->LBD16    -------- ------->ANAC46            <---------ZAT2     --------->AtMYB61          --------->ANAC46 ----------- ------->ANAC58         <---------At4g35610  --------->MYB46(3)         <---------LBD16 --------->LBD16 ------->ANAC58      ------>ZmHOX2a(2)--------->MYB52(1) --------->DEAR3(1) --------->ARR14(2) <----- >ANAC58  --------->MYB46(3)  <-----------------------TaNAC69(2)    <-----------HVH21--------->MYB52(1) >ANAC58----------->RAV1(1)--------->At4g35610<---------ALFIN1     --------->AtMYB61 -------->P<-----   caagaaattccaacagtcatggatcgagcagctacgaaaccacctgaaccacctccgctccgcccaaaaccatcaccggaactctgctaccggtgatgag  5006700                                                                                 <-----------TGA1                                                                                 <-----------HVH21                                                                                --------->O2                                                                                --------->bZIP60(2)                                                                                <---------O2                                                                                --------->TGA2(1)                                                                                <---------TGA2(1)                                                                   ----------->HVH21                                                                  --------->ATERF1(1)                                                                  <------NtERF2 --------->bZIP60(1)                                                                 <---------ATERF1(1)                                                                <---------DEAR3(1)      <---------TOE2(3)                                        --------->At4g35610      <---------TOE1(3)                                        --------->ATERF1(1)     <XXXXXXXXXXXXXXXXXXXXMIR396B                              <---------At4g35610--------->TGA2(2)    <XXXXXXXXXXXXXXXXXXXXMIR396A                             --------->ZAT18    <---------bZIP60(1) ------>MYB52(1)                                            --------->ALFIN1    --------->ANAC58 -------ARR14(2)                                          ============================bZIP_DOF ---ZmHOX2a(1)   <---------ETT(2)                         <---------O2          --------->ANAC46 ->ICU4          --------->ETT(2)                         --------->O2<---------ANAC46 >HVH21      <---------DEAR3(1)     <----------DOF2       --------->TGA1a       --------->ANAC58 ----------AtSPL8--------->ZAT14    ================================bZIP_DOF   <-----------STF1  <--- ----------AtSPL3<---------ZAT14 <---------ALFIN1         <---------TGA1a  ---------->DOF2       <---   gaacggttaagggaggctgtggacagagtgatggaacactttagagaatatcacagggccaagtgggctgcgacggataaagacgtcatcgaagttatgg  5006800                                                      --------->AtMYB61                                                      --------->MYB46(3)                                                      <---------MYB55(2)                                                <------MYB83                                            --------->MYB111(2)                                            --------->MYB55(2)                                            --------->MYB52(2)                                            <---------MYB46(3)                                           <---------AtMYB61                                           --------->ALFIN1                                          <---------MYB52(1)                                         <---------DEAR3(2)                                         <------MYB46(1) --------->MYB46(3)                                         <------MYB83--------->MYB46(3)                                        <---------MYB46(3)                                        --------->MYB111(1)                                        --------->MYB46(2)                                        --------->MYB111(2)                                        <---------AtMYB61<---------MYB55(2)                                        --------->MYB55(2)                                        <---------DEAR3(1)                                        <---------DEAR4(1)------->GAMYB                                        <---------DREB2C(2)                                       <---------ORA47(1)<---------MYB111(2)                                      <-----------HVH21 -------->P                                     <------MYB83<------NtERF2                                     <------MYB46(1) <---------MYB52(2)                                    --------->MYB55(2)<---------MYB111(2)                               --------->ZAT14  <------MYB46(1)                               <---------ZAT14 <---------DEAR3(1)                              <----------DOF2<-------GAMYB<---------ALFIN1                            <---------DEAR3(2)<--------P------>MYB46(1)                         <-----------HVH21<-------GAMYB ------>MYB83                           ------ ------ANAC58 --------->At4g35610   <---------MYB46(3)<---------MYB111(1)                      <----- ------ANAC58 <---------At4g35610  --------->ALFIN1------>NtERF2               --------->ZAT6  <-----   cttctccttgggcttcagctcttgaacggtcgcttcagtgggtcggtggttggcgaccaaccaccttgttccatctggtttacactgagtcgagtatttt  5006900                                                                                        -------------                                                     --------->ARR11(3)               ------->TEIL            <---------ANAC46                --------->ARR11(3)                     --------->ANAC46         <---------CCA1(2)              --------->LBD16------>ZmHOX2a(2)           --------->ANAC58       --------->ANAC55(2)     <----------DOF2       <---------ARR11(3)            --------->ANAC58       <---------ANAC55(2)    <---------ANAC58      --------->ZAT14             <---------REM1(2) --->AHL20(2)                 <---------ANAC58------>ZmHOX2a(2)             --------->ARR14(2) ----AHL20(1)            <---------ANAC58   <---------ARR11(3)           <---------TOE1(3) ----AHL20(2)            <---------ANAC58<---------MYB52(1)             <-----------RAV1(2)   atttgagtctcgtatcgttgatatacttcgtggctttcgcaccggtgatctcagtgatctctccccttctcagttcaggttctacacgaacccctaatta  5007000                                                             ------>ZmHOX2a(1)                                                            --------->TOE2(3)                                                            --------->TOE1(3)                                                         --------->ARR11(3)                                                         <---------ARR11(3)                                                <---------AHL20(2)                                                --------->AHL20(2)   <---------ANAC58                                               <---------AHL20(2)    <---------ANAC58                                               --------->AHL20(2)    --------->ANAC55(2)                                   <---------AHL20(2)   --------->CCA1(1)                     <------                                 <---------CCA1(1)      --------->RVE1(1)                     -------                                 <---------RVE1(1)  <---------AHL20(2)          --------->ATHB12<----                                --------->ARR11(3)  <---------AHL20(1)         <---------YAB1 <------                                <---------GLK1(2)   --------->AHL20(1)         <---------AHL20(2)----               --------->YAB1   <---------ARR11(3)  --------->AHL20(2)  ----------->GT1     ---------  <----------DOF2             --------->ICU4   <---------AHL20(1)    <---------ANAC46 ----------->GT1 ---->AGL2  <---------ICU4  ---------->DOF2    --------->AHL20(1)  <-----------GT1<---------WOX13(1)   gctactttgtttactaatcacaactactagtaaagatttttttatctaatttaataaaatatccttaagttacgttgtaatttgattgaagtaatatcgt  5007100  Previous    Next  AGI:  At3g14880.1    Description:  similar to DOG1 (DELAY OF GERMINATION 1) [Arabidopsis thaliana] (TAIR:AT5G45830.1); similar to tumor-related protein-like, putative [Medicago truncatula] (GB:ABD32966.1) Range:  from: 5006572    to: 5007696    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version