Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------------->AtSPL8                                                           <---------ANAC58                                                           <---------ANAC58                                                     <---------DAG2                 <---------AHL20(2)                  <----------DOF2   <----------DOF2       <---------AHL20(2)                    <----------DOF2  <---------WRKY18(1) --------->DAG2 <---------ANAC46--------->AHL20(2)       <-----------GT1<-----------GT1         ---------->DOF2  --- -------DOF2  ------->TEIL      <----------DOF2    <---------TOE1(2) ----------------->AGL1----------   tttgagtatatatatgtatttaaactcattagttctttttgtattcactttcgcacttttttcttgactgttccttttcagaaaaaagttgaatagaaaa  5003500                                 --------->ANAC55(2)                             <-----------HVH21                           <-------MYC3                                  <---------AHL20(2)                           ------->MYC2                                 --------->AHL20(2)                  --------->ATHB51                                     <---------YAB1                  --------->ATHB12                                  <---------YAB1                  <---------AHL20(2)                                <---------AHL20(2)           <-------GAMYB   <-------MYC2                            <---------AHL20(2)          --------->ALFIN1 ------->MYC3                          <---------YAB1        <---------ANAC58<---------AtLEC2                  <---------ANAC58        <---------ANAC46<---------ANAC58                  <---------ANAC58                <---------DAG2 ------>YAB1      --------->AHL20(2)                      <---------ANAC46                <----------DOF2 ->GT1  <---------ANAC58<---------ANAC58 <---------At4g35610 <-------GAMYB  <-----------RAV1(1)   taagaacgaggggtgttgaattatttgcatgtgtcatgtgttctgcagataaacccatttgggtgttatttttattatatgttgttttctcacttttgtt  5003600                                                                          ----------->GT1                                                                     --------->YAB1                                                               --------->TOE2(3) --------->DAG2    --                                  <---------ALFIN1    <---------GLK1(1)   --------->ANAC58   <-------TEIL                                <---------ALFIN1     --------->ARR11(3)   --------->ANAC58<---------DEAR3(2)                                ----------->RAV1(1)  <---------ARR11(3) ---------->DOF2  ------>ZmHOX2a(2)          --------->At4g35610--------->PCF2      ---------->DOF2  --------->YAB1---------->DOF2 -----   tgattctatagcagcacaatttgactaaatagccccacacacatatatagcaaaagatttcagaacattaataagaaagcaaaaaagttgatcggttcat  5003700                         ----------->GT1                  --------->ANAC58                                <---------ANAC46                  --------->ANAC46                                <---------ANAC58                  --------->ANAC58                    --------->ATHB12             <---------ZAT14                         <---------YAB1      --------------->AtSPL8            <---------ANAC58          <---------ANAC58      <---------------AtSPL3            <---------ANAC58      --------->KAN4(2)                   ---      <---------------AtSPL8       <<<<<<<<<TBF1   <---------ANAC58                          -------- -------->DOF2    --------->ANAC55(1)   <---------ANAC46<---------WOX13(1)          <---------AHL20(2) ---->AtLEC2 --------->ZAT14  --------->KAN4(2)    <---------ANAC58        --------->AHL20(2)<-------   gaaaagaaatggtactacacacgcaagttgtttattcttcttccttggacatttcttgattgtttattccttgtaaattaaaacatttttttcatttata  5003800                                                                                                    -                                                                                                    <                                                       --------->GLK1(2)                            <                                           ------->TEIL<-----------ARR10                           <-    <---------ALFIN1                       <---------ARR14(2)                                   <----  ------->TEIL --------->ANAC46            --------->ARR14(2)                                  ------ <-----------GT1 <---------ALFIN1     --------->At4g35610                                      <----- ------------>AtSPL8                  <---------At4g35610                                     <------ ->AHL20(2)    <---------ALFIN1  <----------DOF2    <---------ARR11(3)      <----------DOF2 <-------- --AHL20(2) --------->PCF2    ------->TEIL<---------CCA1(2)        ------->TEIL       <---------ANAC46   tatgaaccacattgtccccacaactctggctgaatctttaagctgtatccactagataatctaagcatgtatgtctctctttctctctgtgtgtatatat  5003900          --------->ARR11(3) <------------CBF -------->ATHB12 ---------AHL20(2) ---------ICU4                               <---------ZAT18 --------YAB1                               <---------ZAT6 -----AHL20(2)                          --------->ZAT14 --->AHL20(1)              *TSS         <---------ZAT14 ----AHL20(1)            <----------DOF2--------->ZAT18 ---AHL20(2)        <----------DOF2 --------->DAG2                                             <----- ---TBP   <---------ARR11(3)       ---------->DOF2                                   <---------At4g35610   atttattgcaaacatctccctcctttcctttgtgaccaaaagtgtagtgcgaaccatttgtgaaacaatctcttcaagcttcttgtctgctcttcatctt  5004000                                                                 <----------DOF2                                                                <---------ANAC58                                                                <---------ANAC58                                                       ------>ZmHOX2a(2)                                                     --------->AGP1                                                     <---------AGP1                                                     --------->ARR11(3)                                                     <---------ARR11(3)                                                    <---------CCA1(2)         <---------DAG2              ---------->DOF2                     <---------HSFB2a(2)         <----------DOF2            --------->MYB46(3)          <---------YAB1<------ZmHOX2a(2)<---------DAG2   ---------->ID1                    <-----------------AGL3    <------------------------ANAC81 <-----------RAV1(1)    <---------REM1(2)         --------->HSFB2a(2)  <----------DOF2 -----DOF2<-----------GT1 ---------->DOF2         ------>ZmHOX2a(1) <-----------GT1               ---   tttttgttgttttaaccaaagaagtctacaaagtgaagctctattaatggtcctagatctaattttgcttttacttttctctttttgttcgatatagaca  5004100                                                                         --------->At4g35610                                                                         <---------At4g35610                                                                      --------->At4g35610                                                                      <---------At4g35610                                                                  ------->TEIL          ------>ZmHOX2a(1)  <----------DOF2                      <---------ARR14(2) <-----------GT1             <---------DAG2                    <---------YAB1             --------->ATHB12 -------->GT1     <---------ALFIN1                ---------->DOF2 --------->ARR14(2)    >>>>>>>>>>>>>   ttgttacaagtcctattcatccacttcttcacttttttttttgttatcttactaaagcattggtgatgaatctgcagatggagtctgtgaaaccattgga  5004200                                                                             <---------HSFB2a(2)                                                                             <---------HSFC1(1)              --------->DAG2                                         --------->ALFIN1       <--------             ---------->DOF2            ---------->DOF2         -------->P   --------->HSFB2a(2)           <------ZmHOX2a(1)   ------->TEIL                    --------->MYB52(1) ----------->GT1          --------->LBD16   --------->ANAC58              --------->DAG2     --------->HSFC1(1) >>>>LFY<---------LBD16     --------->ANAC58             ---------->DOF2     <-----------RAV1(2)   tgttgtttcttcaggaaaaggaaaactcagacgcacatttgctaaagtcatcaacatgaaaaagctaaccggtgttgttccagaaggtaacaacaaggtt  5004300                                                                           <----------DOF2                                                             --------->ARR14(2)                                                             --------->GLK1(2)                       ----------->GT1                       <-----------ARR10            <------ZmHOX2a(1)                      --------->DAG2           ---------->DOF2             ------>ZmHOX2a(1)     <---------ZAT14---------->DOF2     --------->ARR11(3)   <---------ARR14(2)    <---------ZAT2 --------->DAG2  --------->ANAC58       <---------ARR11(3)  <---------CCA1(2)      --------->ZAT2 -TOE2(3)        --------->ANAC58   ---------->DOF2         <---------GLK1(1)----------->HVH21   gaaagagtgaagaagagccaagaaaaggtgaagttggataaagatttagcaaagaatgctgcaaatctgtctgagtcctttgacaagctggaggaagagt  5004400  Previous    Next  AGI:  At3g14870.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G53380.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G53380.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G53380.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72546.1); contains InterPro domain Protein of unknown function DUF641, plant (InterPro:IPR006943) Range:  from: 5003927    to: 5005746    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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