Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->ANAC46                                                  --------->ANAC58                                               <---------ATHB12                  --------->ZAT18          <---------------AGL15                  <---------ZAT18          --------------->AGL15                  <---------ZAT14      <-------MYC3                  --------->ZAT14      ------->MYC4          ------>ZmHOX2a(2)            ------->MYC2    =============HOX2a_HOX2a           <-------MYC2     --------->TOE2(3)    <------ZmHOX2a(1)                  ------->MYC3     <---------MYB59 ->GT1  --------->ARR11(3)       ----------->HVH21--------->ANAC58  <-----------GT1   tttagaggatgatccagtagtccacttgagaaccgatgacatgtgcttaatcaaggaacctaaattcaatttacaacaattgacataaaaaaccagaaat  5000700                                                                                         ------------                                                                       <---------HSFB2a(2)-----------                                                                       --------->HSFB2a(2)<----------                                                                       ==============================                                                                       <---------------AGL15                                             --------->MYB52(1)        --------------->AGL15                                            <----------ID1            ----------------->AGL1                                          --------->ANAC58          <-----------GT1      <-----------                                          --------->ANAC58      --------->DAG2    --------->At4g35610                                          --------->ANAC46     ---------->DOF2    --------->ZAT2                                        ---------->DOF2     ----------->GT1    --------->At4g35610                             <---------At4g35610      --------->MYB59-------->P<---------At4g35610  ----------->GT1---------->DOF2      <------ZmHOX2a(2)<---------ANAC55(2)   <------ZmHOX2a(1)     --   tgaagagtgaattcactaagaaagtgagtgaagcagatagatcaaagcaacgaagttaagtatggtaaagttaccagaaggagcagcttgagcttgaaat  5000800                            --------->DAG2       <---------ZAT14 <-------TEIL       --------->ZAT14<------ZmHOX2a(2)                                                  --------->CCA1(2) ----->AGL2          <---------ARR14(2)                                                 --------->ARR14(2) ---->AGL15          --------->ARR14(2)                                           xxxxxxxxxxxxxxxx>smallRNA(s) -----AGL15          --------->ARR11(3)                    ---------->DOF2       --------->ARR14(2) ======MADS_MADS     <---------ARR11(3)                 --------->ANAC58         <---------ARR14(2) ------AGL3----------->GT1 ---------->DOF2              --------->ANAC58         --------->GLK1(2) -------->DOF2---------->DOF2                ---------->DOF2                    <---------GLK1(2)<---   ggaaaggagtgaagagtaaagaagatccataaagtgaagaaagtattgaaagaagaacaagtaaagctctcagcgtttagaagaatctgagatttgccca  5000900                                                                                         ------>MYB83                                                                                         ------>MYB46(1)                                                                                       --------->AtMYB61                   --------->DAG2                                                      --------->MYB46(3)                  ---------->DOF2                                                 ----------->RAV1(1)          --------->ARR14(2)                                                     --------->ANAC46          <---------ARR14(2)    <-----------RAV1(1)                         --------->ANAC58          <---------ARR11(3)   <---------TOE2(3)                            --------->ANAC58          ------->TEIL       <---------AHL20(2)                             --------->ANAC46         <---------CCA1(2)  --------->AHL20(2)                             ------->GAMYB--------->MYB52(1) <----------DOF2--------->HSFB2a(2)                                       <---------ALFIN1 ------CCA1(2)  <---------HSFB2a(2)                           <-----------GT1  --------->AtMYB61   tctctttctctgtatcttccaaaagtacaattttatgttggaatcgaaccctagtagaggcgattcacatcttccaacacaccacaacaccaactgatag  5001000                                                                                       --------->ATHB12                                                                                     --------------->AGL15                                                                                     <---------DAG2                                                                                     --------->TOE2(3)                                                                                     <---------------AGL15                                                                                     <---------MYB59                                                                                    -----------------                                                                                    -----------------                                                                                    <----------------                                                                                    <----------------                                                                                    <----------------                               <-----------GT1                                      <----------------                          <---------RVE1(1)                                       <-----------GT1                         <---------ARR11(3)                              ------->TEIL--------->TOE1(3)                         <---------GLK1(2)                             ------->GAMYB-----------------                         --------->ARR11(3)                           <---------MYB52(2)                    ----------->RAV1(1)       ---------->DOF2<------------CBF --------->DAG2              --------->At4g35610      <----------DOF2 ---------->DOF2--------->MYB46(3)<------------CBF              <---------At4g35610 <----------DOF2    *TSS  --------->ARR11(3)---------->DOF2---------   aatgaaaccaatttgcagatgacaacagatttttttcttttcttttttgaaagtaagaaaagaaattgtgtaacgaacataaagttaccttattgggtta  5001100 >AGL1 >AGL3 -AGL3                                        ------------>CBF -AGL2                                      <----------DOF2      <---------ANAC58 -AGL1                           <---------TOE2(3)  --------->ANAC58         ------>ZmHOX2a(1) -AG                --------->YAB1      <-----------GT1          <---------ANAC58<-----------GT1 >AG               <---------YAB1<---------TOE1(3)  --------->ANAC46         <----------DOF2 -->GT1           --------->AHL20(2) <-------TEIL   --------->ANAC58        --------->TOE2(3)   <----   ctcgtgttttttatgggccttataataggcccattaaggttcttacctttcaatacgcccatttagtgagtgctaaatcctttatactcactgccactgg  5001200                                                                        --------->ANAC58                                                                   <------ZmHOX2a(2)                                                                 --------->At4g35610                                          ------------------------>ANAC81         --------->ANAC58                                 <---------TOE2(3)            <------ZmHOX2a(2)   --------->ANAC46                                ---------->DOF2              <-----------HVH21    --------->ANAC58                      <----------ID1     <----------ID1--------->DAG2   --------->ANAC58 -----PCF5          ---------->DOF2  ---------->DOF2  ---------->DOF2 --------->At4g35610   gccactagaagtcttgaatactaaaagacaaaactaaagtaaagaaacaaaaaaaaaaaagccgatcagatcagaagcacttctacgacatgtccaatcg  5001300                                          --------->AHL20(2)                                          <---------AHL20(2)                                      --------->AHL20(1)                                      --------->AHL20(2)                                      <---------AHL20(2)                                      <---------AHL20(1)                                     --------->AHL20(2)                                     <---------AHL20(2)                               ----------->GT1                              <---------TOE2(3)                              <---------TOE1(3)                              --------->DAG2                        <---------------AGL15                                        --------->YAB1            <---------ANAC58  --------->MYB59                                        --------->AHL20(2)            <---------ANAC58  <---------------AtSPL8                           <---------ANAC55(2)       <----------DOF2  --------------->AGL15                ----------->GT1   --------->ANAC55(2)       <---------DAG2  ----------------->AGL1       <---------DAG2       <---------MYB52(1)      <---------DAG2   <-----------------AGL1       <----------DOF2    <---------MYB46(3)        ----    <---------ARR11(3) <-----------------AG   --------->ANAC46         ----------->GT1  --------->AHL20(2)   catcaatacctttttcttgtctgtttcaaaataaggtaaataaattatatgcaactttatagtatgtgaatagtcgttaatacataataaaaaaatcaag  5001400                     ------>ZmHOX2a(1)                 --------->ARR11(3)                 --------->GLK1(2)                 <---------ARR11(3)                 --------->ARR14(2)                 <---------ARR14(2)          ----------->GT1                           <---------CCA1(2)   ----------->GT1   <----------DOF2             <-------TEIL ----->YAB1 ----------->GT1              <---------YAB1                                             <   aatagtcgtgaatagagaaaatcctttttatcaaatccatactctcataggctcatagctctcaattcttggtttgaaattgaaatcgaattgtctctca  5001500                                                                       --------->ANAC46                                                                  --------->ANAC46                                                                 ------->MYC2                                                                 <-------MYC2                    --------->ANAC58                             <-------MYC3             <---------MYB52(1)                              <-------TEIL  <-----------HVH21            --------->LBD16                                 --------->AtLEC2                       --            <-------GAMYB    <-----------GT1        <---------AHL20(2) --------->ANAC58  --------->ZAT18       <----------DOF2      --------->AHL20(2)  ----------->GT1  ------->MYC3            --------->ZAT14    <-----------GT1 --------->ANAC58        --------->MYB52(1)  <---------At4g35610      <---------ZAT14 ----------DOF2    <---------LBD16  <----------DOF2--------->AHL20(2)  --------->ANAC58  <---------ZAT18   agctttttactttccgttaaacacggacaattaactcactttgtactaactgataaaattacatgcatatgccactccatcactgcatcagtgcattgta  5001600  Previous    Next  AGI:  At3g14860.1    Description:  NHL repeat-containing protein. similar to NHL repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G70280.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO39423.1); contains InterPro domain NHL repeat (InterPro:IPR001258); contains InterPro domain Six-bladed beta-propeller, TolB-like (InterPro:IPR011042) Range:  from: 4998364    to: 5001053    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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