Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <---------AHL20(2)                      <---------AHL20(2)                      --------->AHL20(2)                    --------->AHL20(2)                    <---------AHL20(2)                  <---------AHL20(2)      --------->TOE2(3)                  --------->AHL20(2)    --------->SPL7                <---------AHL20(2)    <---------SPL7              --------->AHL20(2)     <---------ANAC58                                    <---------AHL20(2)              <---------AHL20(2)     <---------ANAC58                                --------->AHL20(2)          --------->AHL20(2)--------->AHL20(2)                                      <---------YAB1        <---------AHL20(2)<---------AHL20(2)                                      <---------ICU4        --------->AHL20(2)--------->AHL20(2)        --------->ZAT14       <---------AHL20(2)      --------->AHL20(2)--------->AHL20(2)--------->YAB1 <------ZmHOX2a(2)--------->AHL20(1) --------->LBD16--------->AHL20(2)  --------------->AtSPL8                --------->AHL20(2) --------GT1--------->AHL20(2)      --------------->AtSPL3    <---------ICU4      --------->YAB1    < --AHL20(2) <---------AHL20(2)<---------AHL20(2)    <---------ZAT14      <---------AHL20(2)        -- >AHL20(2)<---------AHL20(2)<---------AHL20(2)      --------->REM1(2)    --------->AHL20(2)----------   atccccatatatatatatatatatatatatatatatatgccgtaccataaccagtgtagatcaattttgactaaattaaattagtcattatataaaagct  4987700                     ------>MYB46(1)                   <---------MYB59                   --------->MYB46(3)                                    <---------ICU4                   <---------MYB111(1)                    <----------DOF2--------->YAB1                   <---------MYB46(2)                     ------>ZmHOX2a(1)           ---------->DOF2                <---------AHL20(1)          --------->YAB1    ------>ZmHOX2a(1)------>MYB83         <---------ARR11(3)    --------->YAB1 <---------YAB1    <---------MYB111(2)--------->YAB1     --------------->AGL15                     <- -----------GT1  -------->P          <---------ATHB12    <---------------AGL15                 ------ ------->YAB1------------------------>ANAC81 <-----------GT1    ----------->GT1    <---------ANAC58<- >DOF2  <-----------GT1            --------->WOX13(1)   ----------------->AGL3     <---------ANAC58--   attatccttttaacaaagctaccaaacaaaaacaaaacaatcaatatatacttatctatccttttattgtaacaataatctcatgacttgatgaaaacta  4987800                                                                                                   --                                                                                                  <--                                                   <---------ANAC58                              <---                                                   <---------ANAC58                              <---                                              <---------AHL20(2)                                 ----                                              <--------HAHB4                                     ----                               ---------->DOF2--------->ATHB51                                   <---                            --------->LBD16   --------->AHL20(2)                                 ----                           <---------HSFB2a(2)<---------ICU4                                ---------                           --------->HSFB2a(2)-------->ATHB1      <---------YAB1          ===========       <---------MYB52(1)  <---------HSFC1(1)<---------ATHB12   --------->YAB1            =========== --------ATHB51            --------->HSFC1(1)--------->ICU4<---------ATHB12               ------>ZmHOX2a(1) --->AHL20(2)             <---------LBD16    <---------ATHB51  <---------ATHB51          --------->TOE1(3) --------AHL20(2)   <---------AHL20(1)     --------->WOX13(1)--------->WOX13(1)          --------->TOE2(3) ------->AHL20(2)  <---------CCA1(2)    --------->TOE2(3)  ----------------->AGL3     <-----------GT1   aataattcagttatttgtttcatatatttctggaaaagaaaacatcaattatttcgttcgaatcaattatagttatctacttggtttttttccttaacag  4987900       --------->AHL20(2)       <---------AHL20(2)       --------->ATHB51       <---------ICU4 ---->ZmHOX2a(2) ----ZmHOX2a(2) ------AGP1 ------ARR11(3) ----->AGP1 ----->ARR14(2)                                                         <---------YAB1           <--- ------ARR14(2)                                 ---------->ID1    <---------ZAT18                ---- ----->ARR11(3)                            <------------------------ANAC81  <---------MYB46(3)  ----- >MYB52(1)                       ------>NtERF2 <-----------GT1  --------->PCF2    --------->ANAC58 =====HOX2a_HOX2a             --------->At4g35610 <----------DOF2 --------->ZAT18 --------->ANAC58 ====HOX2a_HOX2a    ----------->RAV1(1) <----------DOF2     ----------->RAV1(2)   --------->AtLEC2<--   atctatgaattatttcgatggacaacacaattcgctggccctctttgtttttctttttctcaacctggcccactatgtttgttcatgcaagtagcaaatt  4988000      --------->ARR14(2)      <-----------ARR10                                <---------GLK1(2)      <---------ARR14(2)                             --------->AHL20(1)              --------->ANAC55(2)      <---------ARR11(1)                             <---------ARR11(3)              <---------ANAC58      --------->ARR11(3)                             --------->ARR11(3)    --------->ICU4      <---------ARR11(3)                             <---------AHL20(1)   <---------TOE2(3)     <---------CCA1(2)                            --------->AHL20(2)     --------->YAB1  <-------TEIL       ------------>CBF         --------->AHL20(2)         <---------ICU4 ------AHL20(2)   <---------AHL20(2)     --------->AHL20(1)           --------->YAB1 <---------ANAC58 ----->AHL20(2)   --------->AHL20(2)     <---------AHL20(2)         <---------AHL20(2)             <- ---->AHL20(2)  <---------YAB1           --------->AHL20(2)  <----------DOF2<---------ICU4         <- -------YAB1<----------DOF2  ---------->DOF2 --------->AHL20(2)     --------->AHL20(2)        ------>ZmHOX2a(1)   aaaattcatatcttctttattaaaacaatagaaaagaccaaaataaaataaaaaaaatattctcttttgttttaataatgttgacttacttatctcctct  4988100                                                        <---------ICU4                                                    --------->AHL20(2)            <---------CCA1(2)                                                    <---------AHL20(2)--------->ZAT14                                                 <---------ICU4       <---------ZAT14         <---------ARR11(3)                     --------->ICU4 <---------At4g35610------>MYB46(1)         --------->ARR11(3)                   <---------ANAC55(2)   --------->bZIP60(1) --------DAG2                             <-----------HVH21    --------->At4g35610------>MYB83 ---------DOF2*TSS            <<<<<<<<<TBF1   --------->ANAC55(2)   <---------bZIP60(1)      <-------   ccttttcgaaatgtcttcatgagtctctcttcttcttccccattcgtcacataattaaacatcgcttctgacttcactctcaccaaatctctcttctttc  4988200                                                             --------->TOE1(3)                                                             --------->TOE2(3)                                                   ------>ZmHOX2a(2)                                                  <------ZmHOX2a(2)               --------->ARR11(3)                --------->ARR14(2)               --------->GLK1(2)                 --------->ARR11(3)               <---------ARR11(3)                <---------ARR14(2)              --------->RVE1(1)                  <---------ARR14(3)           --------->YAB1                        --------->AGP1               <---------ANAC46           --------->AHL20(2)                    <---------GLK1(2)            ----------->GT1     ----------->RAV1(1)                         <---------ARR11(3)    <---------AHL20(2)  --------->ANAC58                               --------->ARR14(3) --------->TOE2(3)  --------->ANAC46                               <-----------ARR10  ----------->GT1  --------->ANAC58                       ------>NtERF2 --------->HSFB2a(2)   <-----------------------TaNAC69(2) ---DOF2--------->YAB1   --------->AHL20(2)     <---------CCA1(2)  ----------->GT1---------->DOF2   <   tcacacacaacaataaaaatcttgaaactaaataagagttctccgacttcagatcttctcaaaccctaaatgttaaaatgtcgttaaatcgacaacttct  4988300                                                                                ------>MYB83                                                                              <---------MYB59                                                                              <---------MYB111(1)                                                        <---------ICU4   --------->HSFC1(2)                                                      ----------->RAV1(1)--------->HSFB2a(1)                                                 --------->At4g35610     <---------HSFB2a(1)                                             --------->ARR14(2)          <---------HSFC1(2)                                             <---------ARR11(1)         <---------------AtSPL8                                             <---------ARR14(2) ---------->DOF2 ------>MYB46(1)                                            <---------CCA1(2) --------------->AGL15                                          <---------ANAC55(2) <---------------AGL15                                          --------->ANAC55(2)----------------->AG                                          <---------ANAC58   ----------------->AGL2                                          <---------ANAC58   ----------------->AGL3                                          <---------ANAC46   ----------------->AGL1      ---------->DOF2 -----------GT1              ------>ZmHOX2a(1)   ------>ZmHOX2a(1)      --------------->AtSPL8   attcacttactacttcatcgtctctcttatcctcttctccgatttcgtatcctctgcaacattaccaaaagaagaaggtaccaacttatacaaaagttta  4988400                                                                                              <------                                    <------MYB83                                             <-------                                    <------MYB46(1)                                         <------NtERF2                                   --------->MYB59                                         ------>NtERF2          --------->ARR14(2)   --------->ATHB12                                           --------->DEAR3(1)          <---------ARR14(2)   <---------ICU4                                 ---------->DOF2<-------          ------->TEIL        <---------ATHB12                           <----------DOF2  <---------DEAR3(1)      ------->TEIL     <---------ANAC46    <---------ATHB12        <---------MYB46(3)    --------->ATERF1(1)  --------------->AtSPL8      <---------YAB1                      --------->ALFIN1 <-----------HVH21  <---------------AtSPL3      --------->ICU4                     <---------At4g35610   ----------->HVH21   tgtctttgtacgtatatgtttgattcggtgtaatgatttggtccaatcgacaatttttgaaattggcagtggatgctttacaaagcgtcgcgacggcgtt  4988500                                    --------->ANAC58                           --------->MYB52(1)                                    --------->bZIP60(1)                      <----------CDC5                                    <---------bZIP60(1)                     <---------At4g35610     -                                    --------->ANAC58                        ------>NtERF2         <--                                 ----------->HVH21                          --------->At4g35610  <---                               --------->O2                                --------->RAP2.6(2)   ====                            <-------TEIL                        --------->GLK1(1)                ----                            ------>ZmHOX2a(2)                  <------ZmHOX2a(1)    --------->ARR14(2)                           <------ZmHOX2a(2)            <-------GAMYB   --------->ANAC46         <---                          <---------ARR14(2)            <------NtERF2------>ZmHOX2a(1)         <----- -GAMYB--------->ATHB12   --------->ARR14(2)           <---------MYB46(3) --------->RAP2.3(1) ------>NtERF2 --DEAR3(1)            --------->ALFIN1               <---------ANAC46--------->MYB52(1)     -------- --ANAC46            --------->ALFIN1           ----------->HVH21  --------->YAB1   <---------ARR14(2)   gaagaagagtaattggaatttcagtgtggatccatgtgacgaaaccttgtctgaaggcggatggaggaatcctaacgccgctaagggattcgaagacgcc  4988600  Previous    Next  AGI:  At3g14840.1    Description:  leucine-rich repeat family protein / protein kinase family protein. similar to serine/threonine protein kinase-related [Arabidopsis thaliana] (TAIR:AT1G53420.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74151.1) Range:  from: 4988114    to: 4988754    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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