Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       --------->At4g35610                                                                  <------ZmHOX2a(2)                     <---------At4g35610                         <---------ARR14(2)                 ------>ZmHOX2a(1)                              <------NtERF2            <---------At4g35610                                <---------MYB46(3)        ================HOX2a_HOX2a                          <------NtERF2       --------->MYB52(1)        ------>ZmHOX2a(2)                                    <---------LBD16  --------->ZAT2  <------       =================HOX2a_HOX2a                         <---------RAP2.3(1) ----------->TGA1       <------ZmHOX2a(2)                                    <---------ATERF1(1) ----------->HVH21      --------->ARR11(3)     <---------ANAC58               ------>NtERF2     ----------->RAV1(2)      <---------ARR11(3)     <---------ANAC58              <---------RAP2.3(3)<---------ZAT2  -------     --------->GLK1(1)<---------ARR11(3)                   <---------DEAR3(1) --------->At4g35610     <---------GLK1(1)--------->ARR11(3)                ----------->HVH21   <-----------RAV1(2) --------->DOF2<---------LBD16                 --------->WOX13(1)--------->ARR14(2)        ------>NtERF2 -----ARR11(3) ----------->RAV1(2)       <---------MYB52(2)<---------RAP2.3(2)<---------At4g35610   tctaaagagatctcatctcctgaagctctctgcttgtgaagaaactgaccaattagcttcgacggcggatcagataactcagctgacgaatgcctccgct  4974000                            ------>NtERF2                           --------->RAP2.3(3)                           --------->DEAR3(1)                          --------->DEAR4(2)                          --------->ORA47(2)                          <------NtERF2                          --------->ATERF1(1)                         <---------ATERF1(1)                         ------>NtERF2                        --------->RAP2.3(2)         ----------->HVH21--------->RAP2.3(1)        <---------------AGL15        --------------->AGL15       ----------------->AGL2       <-----------------AG--------->RAP2.3(2)       ----------------->AGL1       <-----------------AGL1       <-----------------AGL3       <---------ANAC46 --------->ATERF1(2)       <-----------------AGL2       ----------------->AGL3      ------>NtERF2     --------->RAP2.6(2)   <---------ATERF1(1)  <---------ATERF1(2)                         <----------DOF2   <---------ZAT2       --------->DEAR3(1)                  <---------ICU4   ------>MYB83   --------->ZAT2    <-----------RAV1(1)                   <---------YAB1    ------>MYB46(1)   --------->At4g35610 --------->ERF1                    --------->YAB1    --------->AtMYB61   <---------At4g35610 --------->RAP2.3(1)              <---------YAB1     <---------ALFIN1    <-----  --------->ANAC46  <------------AtMYB77         <----------DOF2   <---------DAG2           <-------- ---At4g35610      --------->HSFC1(2)      <---------ATERF1(1) <-----------GT1    ---------->DOF2 -->At4g35610      <---------HSFC1(2)    ---------->ID1 <---------ATHB12<-----------GT1     <--------   ctccccgctgcctgaaatggaaactgccgccgtcttcgtcttcgtcgtctcctttcttatcattcttacccttttcaccatcccaaaagtcatagcttga  4974100                                                        <---------ALFIN1                                                      ------>NtERF2                                                    --------->At4g35610                                                   <---------ATERF1(1)                                                   <---------RAP2.3(1)                                                   ------>NtERF2                                                --------->MYB52(1)                                               --------->MYB46(3)                                               --------->DEAR3(1)                                               --------->DREB2C(2)                                  -                                  <---------WRKY18(1)<---------TCP20         --------->ZAT18  -------                                 ----------->HVH21 <---------DEAR3(2) <---------------------WRI1 <---                ------>MYB83    <---------WOX13(1)<---------DEAR3(1)  <---------MYB52(1)     <------NtERF2 ----WRKY18(1)  ------>MYB46(1)<---------ANAC58--------->At1g77200   <---------At4g35610    ------>NtERF2 -ANAC58   <-----------GT1     <---------ANAC58----------->HVH21     <-------GAMYB          --------- -ANAC58<---------ICU4 <---------ICU4         --------->DEAR3(2)    <---------MYB46(3)    <---------LBD16   ctctttccaaatattacctccctcagcattgctgcttgaccctgtagcaccgacggctccactctcttggccgttgatgttcactatgaagtcccgccga  4974200                          <-------GAMYB                         <---------ANAC58                         <---------ANAC58                    <---------ICU4                   <---------ATHB12                   --------->ICU4                <------NtERF2               <---------RAP2.6(3)               ------>NtERF2              ------->GAMYB              --------->RRTF1(3)              --------->ANAC58              --------->ANAC58              --------->ANAC46              --------->RRTF1(2)              --------->RAP2.6(2)              --------->ATERF1(2)                                               --------->ATHB51              --------->RAP2.3(2)                                               <---------ICU4              --------->RAP2.3(3)                                    ---------->DOF2   --------->LBD16              --------->DREB2C(2)                                  --------------->AGL15              --------->DEAR3(1)                                   <---------------AGL15             --------->MYB46(3)                                   <---------MYB59     <---------HSFB2a(2)             --------->RAP2.3(1)               --------->ANAC58   --------->TOE1(3)   --------->HSFB2a(2)             --------->ERF1<---------MYB52(1)  --------->ANAC58   --------->TOE2(3)  <---------LBD16            --------->At4g35610         ---------->DOF2      <---------ANAC58   --------->AHL20(2)            <---------At4g35610    ------>ZmHOX2a(2)         <---------ANAC58   <---------AHL20(2) -------->At4g35610<---------YAB1 <------ZmHOX2a(2)     --------->ARR11(3)     <---------YAB1 -->DEAR3(1)<---------ATERF1(1)  --------->ARR11(3)     <---------GLK1(2)      --------->ICU4 ---ZmHOX2a(2)<---------ATERF1(2)<---------ARR11(3)     <---------ARR11(3)  --------->AHL20(2) >LBD16   --------->MYB46(3)    <---------GLK1(1)     ----------->ARR10   ----------->GT1   tcagttgaatcgacagccgccatgattccgttagagatctcacaaaggcaagagactagattttcttacctaaaagaagtaattatttccggaaaaaatg  4974300                                                              ---------->DOF2                                                      <---------ZAT14                                                      <---------SPL7                                                      --------->ZAT18                                                      <---------ZAT18                                                    --------------->AtSPL8                        <---------YAB1              <---------------AtSPL8                      --------->ATHB12              <---------------AtSPL3                      -----                      <---------ICU4           ----------->HVH21                                -----                     <---------ATHB12          <---------ZAT6*TSS                               -----                     --------->ICU4       <-----------------------TaNAC69(2)              <---------ICU4                --------->ANAC58         --------->CCA1(2)  <------ZmHOX2a(2)             -------->HAHB4                --------->ANAC58  <---------HSFB2a(2) --------->ZAT14                    --------->ICU4              ---------->DOF2     --------->HSFB2a(2)<---------ZAT6                      <---------ATHB51   ----------->GT1   <---------YAB1 <---------At4g35610 --------->SPL7              ----------->GT1--   gagagaggtttttttggaaagtaatgatttttgttttcagaagagacgagtgatagtgtacgatcaaagaagaagatgagggtgagaggtaataatgcaa  4974400           ----------->GT1           <---------ANAC46       <---------TOE2(3)     <---------AHL20(2)    <---------YAB1  --------->YAB1                                                                                    - <---------YAB1                                                                                ------ --------->ICU4                                            --------->DAG2                   ------->MYC3 ---->ANAC58                         <-------PIF5   ---------->DOF2                         <-------MYC3 ---->ANAC46                         ------->PIF5--------->YAB1                     <---------AHL20(1) ---->ANAC58                      <-----------RAV1(2)     ---------->DOF2           --------->AHL20(1) ------->YAB1                 ---------->DOF2   <---------YAB1--------->ALFIN1      <---------ARR11(3)   gtaataataaatgttgtgaaaacaaaaaccaaaatagcaggtggtatttgatgataaagagaaagtggaagaaaatttgttctcaatatatcaacgtgtg  4974500                                                                                      <---------ZAT2                                                                                      --------->At4g35610                                    <---------MYB52(2)                                --------->ZAT2                    <---------ARR11(3)                                                <---------At4g35610                    <---------GLK1(2)                                            <------MYB83       <---------AHL20(2)          --------->ANAC58                      --------->bZIP60(1)       --------->AHL20(2)          --------->ANAC58    ----------->GT1   <---------ANAC46   --------->AHL20(2)    <---------YAB1         <---------YAB1      <---------bZIP60(1)    ------->TEIL   <---------AHL20(2) ----------------------->TaNAC69(2)            --------->bZIP60(1) ----------->HVH21 ---------->GT1     --------->ARR11(3)       <---------YAB1  <---------AHL20(2)  <------MYB46(1) ----->HVH21 <---------TOE2(3)     --------->ANAC46    <---------ANAC46  <---------bZIP60(1)        <   aaagtttaattttttgacgaaagatttttgatagtgcaagtaacttgatgatcaatgtggtatatatatgatgtgatgtgatttggtgagctgaacgttg  4974600                                                                                   <---------SPL7                                                                                   <---------ZAT14                                                                                 <---------------AtSPL8                          <---------ATHB51                                       <---------------AtSPL3                          <---------YAB1                               ----------->GT1             <----------ID1                                           --------->DAG2           --------->ANAC46     <------ZmHOX2a(1)                    ---------->DOF2           --------->ANAC58--------->YAB1                       --------------->AGL15           --------->ANAC58<--------ATHB1                       <---------------AGL15          XXXXXXXXXXXXXXXXXXXX>MIR863-3P                       ----------------->AGL3<---------LBD16         ---------->DOF2========================================================MADS_MADS    --------   <---------WOX13(1)   <---------------AGL15    <----------DOF2<----------DOF2 <------------------SPL14 ---------YAB1----------->RAV1(1)          <-----------GT1     ======================================   tgctaattgctaaaagcaacaaaaaacaataataggaaatgtttttttcttctttctactatggccctttaaaaagtaacaatggtgtacggatgaaaag  4974700                                --------->YAB1                                ----------->GT1                             --------->YAB1                             <---------ICU4                             --------->MYB52(1)                            <---------ATHB51                            <---------ATHB12                         <---------------AGL15                         --------------->AGL15                        <-----------------AGL1                  <---------AHL20(2)                  --------->AHL20(1)                  --------->AHL20(2)      --------->YAB1    <-----------------AGL3                              ----------->GT1        --     <---------YAB1     ----------------->AGL1                            <-------GAMYB            -- -->DOF2<---------YAB1<-----------GT1   <---------TOE2(3)       --------->LBD16          ----------->GT1 ========================================MADS_MADS              ------>ZmHOX2a(1) <---------AHL20(2)   gaatgctatgataatggaaattttttacaaataatggtaacaaaggttttcgacaactatgcaatcctgaattttgggttgtatatttttggggtaaaac  4974800                                                       --------->ANAC58                                                       --------->AtLEC2                                                       --------->ANAC46                                                   --------->CCA1(2)                                              ---------->DOF2                                    ----                                         --------->TOE2(3)                                   --------                                        <---------ANAC55(2)                                 ---------                                        ----------->GT1--------->ANAC58                  <---------AHL20(2)                   ----------->GT1      --------->ANAC58                                <---------AHL20(2)                  --------->DAG2        --------->ANAC55(2)                             --------->AHL20(2)    <---------GLK1(2)----------->GT1    --------->ANAC58                         <-----------GT1----- ---->MYB83----------->GT1              --------->ANAC46                <---------MYB46(3)  <-------- ---->MYB46(1)  ---------->DOF2    <------ZmHOX2a(1)<-------TEIL  <-----------HVH21 --------->ICU4  -   caaatagattgttttgaaaaaaggtgtaaacaatgtaggactacgtaaaaaagatacatgcaatttcatgtcagtggttttatttactgattaaataaat  4974900  Previous    Next  AGI:  At3g14810.1    Description:  mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein. similar to mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G17000.1); similar to mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G53470.1); similar to mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G78610.1); similar to hypothetical protein OsI_008239 [Oryza sativa (indica cultivar-group)] (GB:EAY87006. Range:  from: 4971230    to: 4974361    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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