Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------------->AGL15                                 <---------------AGL15                             <---------------AtSPL8                           <---------YAB1     <---------ANAC58                  --------->DAG2                         --------->YAB1       ----------->GT1                  ---------->DOF2                         <---------ICU4       <---------ANAC46                ------>ZmHOX2a(1)                     --------->AHL20(2)       <---------ANAC58            --------->GLK1(2)                    <---------AHL20(2)    ---------->DOF2                 --------->ARR14(2)    --------->AHL20(2)  --------->ICU4  --------->ANAC58                  <---------ARR14(2) -------->AHL20(2)  --------->AHL20(2)  --------->ANAC58                  <---------ARR11(3) ------>GT1    <---------TOE2(3) <----------DOF2                   ----------->GT1 --------------->AtSPL8   gaaaaaataaaaagattaacatataaattatgattctttaacaagaaagcgtgaatttcgactcaaaaacagagaaaatcctaaagtagtactcaaattt  4963200                                                 --------->YAB1                                                <------ZmHOX2a(2)                                               <---------ARR11(3)                                               <---------ARR14(2)                                               --------->ARR14(2)                                               --------->ARR11(3)                    --------->ZAT14           <------ZmHOX2a(1)          --------->REM1(1)                 ----------->GT1      ----------->RAV1(1)     ------->GAMYB--------->ANAC46                --------->DAG2     --------->ANAC58         --------->ANAC58               ---------->DOF2     --------->ANAC58         --------->ANAC58        --------->TOE2(3)               <---------ZAT14     --------->ANAC46--------->At4g35610 <---------------AGL15 --------   agggaattagacgagagtaaagtaaactcacatagataagcaacacgaggatcatcagactcaaccaagtttgctacacgaagaaacctttgaatccctg  4963300                                                                                                    <                                                                                                    <                                                                                                    -                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                          <------NtERF2                                                                                         ------>NtERF2                                                                                         --------->LBD16                                                                                        --------->ATERF1(2)                                                                                        <---------ATERF1(2)               --------->HSFC1(2)                                                       <---------DEAR3(1)               <---------HSFC1(2)                                                      <---------ANAC58               <---------HSFB2a(1)                                                     --------->ATERF1(1)               --------->HSFB2a(1)                                                     <---------ANAC58               <---------At4g35610                                                     <---------LBD16           --------->LBD16              <---------ALFIN1                            <--------P-------          --------->HSFB2a(2)         <---------ALFIN1                         <---------ZAT2<-------          <---------HSFB2a(2)         ----------->RAV1(1)             --------->O2 <-------GAMYB   <-          --------->ANAC46         <---------ATERF1(1)                <---------O2<---------MYB46(3)<         <---------LBD16 <-----------HVH21              ---------->DOF2        --------->ZAT2<------- --->RAV1(2)<---------MYB52(1)     --------->PCF2   <----------DOF2   <---------ANAC46<---------ATERF1(1)   aggctaatgtctccggaagcttctcgctgtcatagggctcccacacatattgttctttcaaagcgaggggtctcgtgaacaagctggttgccggcgaatc  4963400      <------ZmHOX2a(1)      ==============HOX2a_HOX2a --------->LBD16 ---------ANAC46 ---------HSFB2a(2) -------->HSFB2a(2) ----HSFC1(2)         --------->ANAC58 --->HSFC1(2)         --------->ANAC58 ----HSFB2a(1) <---------------AGL15        <-----------RAV1(2) --->HSFB2a(1)------>ZmHOX2a(2)          ------>ZmHOX2a(2) -----ARR10   <-------TEIL              <------ZmHOX2a(2) -->GLK1(2)   ===============================HOX2a_HOX2a ---ARR11(1)  ----------------->AGL2   <---------ARR14(2)       <<<<<<<<<<<<<<<<<LFY ---ARR14(2) <------ZmHOX2a(2)         --------->ARR14(2)      --------->ANAC46 >TEIL===============HOX2a_HOX2a      <------ZmHOX2a(1)        --------->ANAC58  <---------ZAT2 -->ARR14(2) ================================HOX2a_HOX2a       --------->ANAC58  <---------At4g35610 --ARR14(1) <---------ARR14(2)     <--------P             <---------MYB52(1)     --------->At4g35610 --------LBD16----------------->AGL3 <------MYB83        --------->TOE2(3)    ---------->DOF2 ---------LBD16--------------->AGL15 <------MYB46(1)    <---------ANAC58  --------->At4g35610 --CCA1(2)  --------->ARR14(2)    <---------MYB52(1)    <---------ANAC58  <---------At4g35610   ttccgggaggatgggatccatatcaagaaaaacatcggtaggatccacaggggcgatttcgttagacgacattgggagatgaaagctgcttcttctattg  4963500                                                 <---------ALFIN1                                           --------->DAG2                                          ---------->DOF2            <---------GLK1(1)                                     --------->AHL20(2)        <---------ZAT2                                     <---------AHL20(2)        <---------ANAC46 --------->AHL20(2)                                     --------->YAB1    <---------ANAC58     --------->AHL20(2)    ---                                 --------->AHL20(2) ------->PIF5     --------->GLK1(1)         <-----       <---------AtLEC2          <---------AHL20(2) <-------PIF5 --------->ALFIN1  ------------>CBF<-       <---------ANAC46          --------->AHL20(1)*TSS<---------ANAC58    ----------->TBP---------->DOF2   ttttagttggcatggagataacattggagatggaattaattatataaagcagcacttgcttagcgaggtggaattctataaaataaacaatgtaaagacg  4963600                          <------------CBF                         <---------AHL20(2)                         --------->ATHB12                           --------->DAG2             <-----                ---------->DOF2                          <------MYB83                          <-----       ----------->GT1  <---------AHL20(2)               <------MYB46(1)                      -------       <---------ZAT6   --------->AHL20(2)              --------->MYB46(2)                  <-------- ------>ALFIN1<---------AHL20(2)  ----------->GT1       --------->MYB111(1)               <---------- ----DEAR3(1) --------->AHL20(2) <------ZmHOX2a(1)      --------->MYB59        ------>ZmHOX2a(1)----- --------MYB46(3)      <----------DOF2      <----------DOF2        ---------->DOF2  ---------->DOF2   gtgtttgaagtgttaattaaaagtgatttattggaggagaaaaatgctttctactagtttggtactagagaaagtggtttcctagcaaaagtttacactt  4963700                                                                                   ---------->DOF2 --------->ANAC58                                                                 <---------AHL20(2) --------->ANAC46                                                                 --------->AHL20(2) --------->ANAC58<---------AtLEC2                                             <---------YAB1  ------- -----DOF2      <-------TEIL                                                  <---------AHL20(2) ----DAG2     ------->MYC2                                                   --------->AHL20(2) -->ANAC46    <-------MYC2                                                   <---------AHL20(1)  <--- ---GT1       ------->MYC3            --------->AHL20(2)                     --------->AHL20(1) ----- -GT1--------->YAB1     ---------->DOF2                     <---------ARR11(3)--------->AHL20(2)<---- ---->ZAT14   <-------MYC3----------->GT1        <---------TOE2(3)<---------YAB1 <---------YAB1 <----   tacacgataatatcaacgtgcatgggaaaagaaaaaccattaaaacaagttgagatagactaaatcttatgaattggaatataattaaagcatatgtata  4963800                  --------->KAN4(2)                 --------->KAN4(1)         ------>NtERF2                                                                             <-        --------->RAP2.6(2)                                                            --------->AHL20(2) >TEIL --------->MYB46(3)                                            ----------->GT1   <---------AHL20(2) ------AHL20(2)  <----------TaMYB80                               ------>MYB83         --------->AHL20(1) ---->ARR11(3)   <---------KAN4(1)         --------->ARR11(3)     ------>MYB46(1)     --------->AHL20(2) -----ARR11(3)  <---------KAN4(2)          <-----------GT1    >>>>>>>>>>MYB80     <---------AHL20(2) -----AHL20(1)  ---------->TaMYB80      --------->YAB1    <---------ATHB12        --------->AHL20(2)   tatttcttagccaccaagaatataccaaaatatagactacaaaaataacttgatgtccaaatcaaaccaaattgtaaaatgtattaaaaaaaattagtca  4963900                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                         <---------ICU4                                                                                         <---------AHL20(2)                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(2)                                                                                    <---------AHL20(1)                                                                                --------->YAB1     --                                                                               <---------YAB1      <-                                                --------->YAB1                <-----------GT1 <------                                   <----------DOF2                           --------->YAB1 <--------                      <---------DAG2           <---------ATHB12           <---------ICU4--------->AHL20(2) ---------DOF2        <----------DOF2 --------------->AtSPL3 <---------------------WRI1 <---------AHL20(2)   tcttttttttttttgtaaaacaaacttttttagtcatctttcggtacaaatcatagatgagtagtcgatgtgttcaaaattatcattttatttattacca  4964000       --------->YAB1   <---------AHL20(2)  <---------YAB1 ---------------AGL15                                          ---------->DOF2 ------->AHL20(1)                                       <---------AHL20(2)                        <-- --------AHL20(1)                                      <---------AHL20(2)                     <------MYB83 ------->AHL20(2)                                      <---------AHL20(1)                     <------MYB46(1) --------AHL20(2)                                      --------->AHL20(1)                    -------- ---YAB1    --------->ICU4                             --------->AHL20(2)             ----------->GT1 ---GT1----------->GT1<-----------GT1                 --------->AHL20(2)         --------->ICU4  ----   ttttattaatggtaatttttgttctaactatttgtttagtttgaatgtgtgatgaaattaatttctaaagcgtagtagtagtagtaatgggtaatttggt  4964100  Previous    Next  AGI:  At3g14780.1    Description:  similar to ATGSL04 (GLUCAN SYNTHASE-LIKE 4), 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G14570.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81673.1) Range:  from: 4961813    to: 4963551    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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