Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                          --------->TOE2(3)   <---------AHL20(2)  ---                                                          --------->TOE1(3)   --------->AHL20(2)  ---                                                     <---------MYB52(2)      --------->AHL20(2)   ---                                                    --------->ANAC58      --------->AHL20(2)      ---                                                    --------->ANAC58      --------->AHL20(1)    <----                                                    --------->ANAC46      <---------AHL20(2)    <----                    --------->ANAC58            --------->AtLEC2         --------->AHL20(2)     <----                    --------->ANAC46            --------->ANAC58 --------->TOE2(3)        <---------- >ZmHOX2a(2)        --------->ANAC58            --------->ANAC58 --------->TOE1(3)--------->YAB1<---- --ARR11(3)      <---------REM1(2)           <---------ATHB12 <---------CCA1(2)--------->WOX13(1)----   catcaaaaccttctgtccctacaagctatatagattccatactacaaatcatgcaagtaacctcaaatcttaaaaaaaaattaatcaaaatttgactacc  4956000                                                                                                    X                                                                                              <------ ---------MYB59                                                                               ------- ----->P                                                                                      <------MYB83 --->MYB83                                                                                    <------MYB46(1) ------>MYB52(1)                                                                              ------- --->MYB46(1)                                                        --------->ZAT6      --------->ANAC46 -----MYB111(1)                                                  <---------WOX13(1)      --------->ANAC58 -----MYB59                                                   <---------YAB1             <---------ANAC55(2) -----MYB111(2)                                               ------>ZmHOX2a(1)          --------->ANAC55(1) -GT1  <---------YAB1                                      ------>MYB46(1)               --------->ANAC55(2) -----MYB46(2)            <----------DOF2                  ------>MYB83                  --------->ANAC58 ----->MYB55(1)<---------YAB1    --------->GLK1(2) <-----------GT1 <-----------GT1      <---------LBD16   tacctgattacaatttgatcattcatttctttgctaatcttgaaccaaaattttgactaccttcctgattaactctcaacttaaaaacaatacggaaggt  4956100                                                                               <---------ANAC58                       --------->YAB1                                          <---------ANAC58                      <<<<<<<<<ARR2                                            <---------ANAC46                      <<<<<<<<<ARR1       --------->TOE2(2)              <---------AHL20(2)     -----         --------->HSFB2a(2)              --------->TOE1(2)             <---------AHL20(2)      <----     <----------DOF2  <---------ATHB12   --------->YAB1                 --------->AHL20(2)    ------- XXXXXXXXXXXXXXXXXXX>MIR396B            <<<<<<<<<ARR1                   <---------AHL20(1) --------->AHL20(2) ---HSFB2a(1)  --------->TOE2(3)        <---------ATHB12            <---------AHL20(2)     <---------AHL20(1) ---->GT1<---------HSFB2a(2)            <<<<<<<<<ARR2--------->YAB1 --------->AHL20(2)     --------->AHL20(1) -->HSFB2a(1)  --------->TOE1(3)----------->GT1   --------->YAB1   --------->AHL20(2)      <---------AHL20(2)   tacacaactttccaaaaccttacaatcatacaaaacgttacaatcatacgactaataacaaatgttacatttaattttttttcgtatgcacaataaattt  4956200                                          <---------ALFIN1    ------------>CBF                                       --------->ANAC58    ----------->RAV1(1)                                       --------->ANAC46    ------>MYB46(1)                                       --------->ANAC58    ------>MYB83                                     <-----------GT1      --------->ANAC46                                  <---------AHL20(2)     <---------MYB59                          ---                                 --------->AHL20(2)      --------->MYB46(3)                    <-----                             --------->ARR11(3)         --------->ANAC46                     <-------       <---------ANAC58      <---------ARR11(3)         --------->ANAC58                     --------       <---------ANAC58      <---------AHL20(1)         --------->ANAC58                  --------->ARR11(3) ---->AHL20(2)             <---------ARR14(2)    <-----------GT1                          <---------ARR11(3) -----AHL20(2)             --------->ARR14(2)    --------->ARR11(3)  ------->TEIL --------->At4g35610 -->AHL20(2)    --------->ZAT6<---------AHL20(2)<---------CCA1(2) <---------ATHB12<---------At4g35610   atatagtttgcgttacgaagactacaacggatatatttaataccccacttatatctatacccaacacaatgaatcaacaaggtgagatgaaagattttat  4956300                                     <---------ICU4                                     -------->HAHB4                                     --------->YAB1                                    --------->ICU4                                    <---------YAB1                                  <---------ICU4  <---------ANAC46               --------->ICU4  ----------->GT1              --------->YAB1                           --------->At4g35610 ------>ATHB12                 --------->TOE2(3)                        <---------At4g35610 -------CBF             <---------YAB1     --------->AHL20(2)        ---------->DOF2              <-- --AHL20(2)             ----------->TBP<---------YAB1   *TSS <---------GLK1(1)                    --- ->AHL20(2)        ----------->GT1--------->YAB1    --------->MYB52(1) ------->TEIL <-----------GT1   tgatgggtatatagaaactataggttataaataccataatgatgaataaatctataacggtggaattcacatgaagctcaccaatttcacctatatactt  4956400                                      <---------------AGL15                            <---------------AGL15                                     --------->ANAC46                            --------------->AGL15                                     --------->ANAC58                           ============================MADS_MADS       --------->GLK1(2)---------->DOF2                           ----------------->AGL3      --------->HSFB2a(2)    --------->At4g35610 <-- -------At4g35610          ----------------->AGL2      <---------HSFB2a(2)    <---------At4g35610<--- ------>At4g35610   ---------->DOF2  <-----------------AGL3        <------ZmHOX2a(1)  --------->ANAC58   agctctcaagatagactactaaaaaagaccccaaatttagcaaaaaatggaagccttgtggaagttggaggagaaactgaagctaactacgaaagaagcc  4956500                               --------->ANAC58                               --------->ZAT6                             <---------DOF5.7(2)                            --------->ARR14(2)                            <---------ARR14(2)                           --------->At5g28300                        <------NtERF2                        <---------LBD16                        --------->At4g35610                       <---------ERF1                     <---------At4g35610                     --------->ZAT2                            --------->ANAC58                    <---------RAP2.3(1)            <------NtERF2--------->LBD16                    <---------MYB46(3)           <------NtERF2 --------->ANAC46                    <---------ATERF1(1)         --------->At4g35610               ---------->DOF2 --------->ANAC58 --------->LBD16------->GAMYB   --------->ANAC58           --------->ETT(1)--------->DOF5.7(2) --------->ANAC46--------->RAP2.6(2)                  <     ------>ZmHOX2a(2)<---------DEAR3(1)       --------->RAP2.6(2)     --------->HSFB2a(2)  ---------   <---------ARR11(3)--------->ATERF1(1)       --------->DEAR3(1)      <---------HSFB2a(2)  ---------   --------->ARR11(3)--------->At4g35610    --------->ARR14(2) --------->ANAC58--------->ANAC58    -- -------MYB52(1)  <---------At4g35610       <---------ARR14(2) --------->TOE2(3)       --------->At4g35610 ------RAP2.6(3)  --------->At4g35610    <---------AtLEC2     --------->MYB46(3)       <---------At4g35610   gttgtgatcttggtcggaacagcggctgcggtaacgctactctgcatagccgcagcgtttctcaaccgcaattctcgagggaagcaagtagcagacgcag  4956600       ----------->HVH21     <------NtERF2     --------->At4g35610   <---------ANAC58                   <------ZmHOX2a(1)   <---------ANAC58         <------ZmHOX2a(1) ---------DEAR3(1)      <---------WRKY12                             ---------->DOF2               <- >ANAC58                <---------WRKY38(1)                   ---------->DOF2               <-------- >ANAC58               --------->WRKY18(1)    <------ZmHOX2a(1) ----------->GT1         <----------DOF2 ------->ALFIN1       <-----------HVH21 ---------->DOF2 --------->ALFIN1       --------->ATHB12    <-   agtgggcgtctgaaacagcgtttgggtcaaggactatggaggaaaagaggaaatgtaagtggagcaaagtgaaaagaacgttgatgggttctttttgttg  4956700                                            --------->AtMYB61                                          ------>NtERF2                                         --------->RAP2.6(2)                                        --------->MYB46(3)                                       <---------ATERF1(1)                                       <---------At4g35610                                       <------NtERF2                                      --------->RAP2.6(2)                                    <---------At4g35610                                    <---------ATERF1(1)                                    --------->At4g35610                                    <------NtERF2<---------ANAC58                                    --------->ATERF1(1)                                          ----                                   <---------ORA47(2)                                            ----                                   <---------ATERF1(1)                                 --------->LBD16                                   <---------RAP2.3(1)                               ------>ZmHOX2a(2)                                   ------>NtERF2 <---------ANAC58                    <---------LBD16             --------->ALFIN1     --------->ATERF1(2)                               <----------------    --------->ZAT2                <---------ATERF1(2)                              --------->ARR14(2)    --------->At4g35610           <---------RAP2.3(3)         ---------->DOF2    <---------MYB46(3)    <---------ZAT2                <---------RAP2.6(2)  <-------GAMYB            <--------P      <----    <---------At4g35610           <---------RAP2.3(2)  --------->At5g28300     <-------GAMYB    -----   <-----------RAV1(1)            <---------DEAR3(1)  <---------MYB46(3)      <---------MYB46(3)----- --------GLK1(1)        ----------->GT1--------->At4g35610---------->DOF2    <---------RAP2.6(2)<---- ---RAV1(1)<---------ANAC46      --------->RAP2.6(3) <---------ANAC46    ---------->DOF2 --------->ARR14(2) --------At4g35610 <---------------------WRI1    <---------ANAC46    <---------ZAT6<---------ARR14(2)   gagctctgctgcgaagtggatggagatggaaacaaggcggcagccaccattgcttgcggttaaagaaaggagtcttaatgcggttgatccggtttggcag  4956800            <---------ANAC58            <---------ANAC58                                                             --------->ZAT2 --------->AtMYB61                                                                       <---------ZAT2 ----->MYB46(3)                                                                          <---------At4g35610 ----->DEAR3(1)                                                             <-----------TGA1 -AGL1 <---------YAB1                      ------>NtERF2              <---------SPL7  ------>ZmHOX2a(1) --NtERF2  <---------MYB46(3)             <---------ZAT18--------->YAB1    --------->ANAC46         - ---->ATERF1(1)                          <---------RAP2.6(2)   <-----------RAV1(1)   --------->TOE2(3) ---->At4g35610                         --------->At4g35610   ------->TEIL --------->bZIP60(2)     -- -----At4g35610      ----------->GT1    <---------At4g35610<---------YAB1 --------->LBD16--------->At4g35610   cgaccaattctgatgggtgagaaatgtgaattgcctcggtttagcggccttatattgtatgatgaatgtggccatccgcgtcatcatcctcagcttcaag  4956900  Previous    Next  AGI:  At3g14760.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO39487.1) Range:  from: 4956356    to: 4957262    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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