Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------YAB1         ----------->GT1      <------NtERF2     ------>NtERF2   --------->RAP2.3(1)   <------NtERF2  <---------ERF1  ------>NtERF2  <---------ORA47(2)  <---------RRTF1(1)  <---------RAP2.3(1)                                                       ------->GAMYB --------->bZIP60(1)                                                  --------->ANAC46 <---------bZIP60(1)                                             <-----------ARR10 <---------RRTF1(3)                                              --------->ARR14(2) <---------DEAR3(1)                                              --------->ARR11(3) <---------RAP2.3(3)                                             <---------ARR11(3) <---------bZIP60(2)                                             <---------ARR14(2)               --- <---------RRTF1(2)                                   --------->At4g35610--------->MYB52(1)       <-- <---------RAP2.3(2)                                 <---------ARR11(3)--------->MYB46(3)        <--- -------->RAP2.6(3)                       <----------DOF2       <---------CCA1(2)             <------ -------->HVH21                           <---------DAG2    --------->TOE2(3)       ---------->DOF2<-   atgacggcgcaatgttataatttgagaaaatgtctgaaaactccctttttgtcaagagctaacctcatatctccccaacgaaaacagaaaggaattttga  4927500     <---------AHL20(2)                    ------->GAMYB <---------YAB1             <---------ANAC58                                                  <------ZmHOX2a(2) ------>AHL20(2)            <---------ANAC58                   --------->AHL20(2)            -------- -------AHL20(2)            <---------ANAC46             <-----------GT1                --------->ARR14(2) ------WOX13(1)           <-----------GT1--------->At4g35610   --------->YAB1      <------ZmHOX2a(2) ---YAB1    <---------MYB52(1)          --------->MYB52(1)------------>CBF ------>ZmHOX2a(2) <------- --------AHL20(2)<---------AtLEC2   --------->ANAC46  <---------ICU4     <---------AGP1 <---------ARR14(2)   tttatttttaattcgttttgtatggattttacttgtataccccaactgaaatcgaatatttacaataaaaatttggatctattcgatccagacccgatcc  4927600                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                            ------>ZmHOX2a(2)                           <---------GLK1(1)                           --------->GLK1(1)                          <---------ARR11(3)                          --------->ARR11(3)                          <---------AGP1                         <---------CCA1(2)                     <------------CBF                   <---------AHL20(2)                   --------->AHL20(1)                   <---------AHL20(1)                   --------->AHL20(2)               <---------AHL20(2)              --------->ARR11(3)                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              <---------ARR11(3)                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)              <---------AHL20(2)                                 --------->ANAC58              --------->AHL20(1)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<              <---------AHL20(1)                        <----------DOF2                           <xx     ---------->DOF2--------->ATHB12              <----------DOF2--------->ANAC58              ------ ->ARR14(2)   --------->AHL20(2)              <---------MYB52(1) --------->ANAC46     ------------>CBF --ARR14(2) --------->GLK1(2)          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        ------>ZmHOX2a(1)<   attatcccaaagagaatatattttattggatctctcttctattcttcggtttctttttcttttgaaaacgaaactgaaacttctccttctcaatttcaaa  4927700                             --------->MYB46(3)                          ---------->DOF2       <----------DOF2 --------->TOE1(3)                                                     <------- ---------DAG2         --------->TOE2(3)                                         --------->YAB1 xxxxxxxxxxxxxxxxxxxxsmallRNA(l2)               ------>ZmHOX2a(1)              <---------ARR14(2) ---->DOF2       ------>ZmHOX2a(1)       ------------>CBF                      --------->GLK1(2) ----------DOF2 --------->TOE2(3)     >>>>>>>>>>GATA-1            <---------GLK1(2)------>ZmHOX2a(1)   agcttttcgatttatgttcctcaaacctcaaaccgctctcgatttcaatcctctcccttctctactcaaattctcaacaagaatcctaatctcttctttc  4927800                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                 <---                                                                                                -----                                        <---------At4g35610                                    ------                                        --------->At4g35610                                   <------                                        ------>NtERF2                                        <-------                                    <-----------RAV1(1)                                      --------                               --------->TOE1(3)                                            <------ZmHOX2a(1)                               --------->TOE2(3)                                            ---------                              --------->ZAT6                                          <---------LBD16     <----------DOF2      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                      ------->GAMYB---  <---------ARR11(3)     --------->TOE2(3)                                <------ZmHOX2a(1)<---------ATERF1(1)  <-----------ARR10      --------->TOE1(3)     ------------>CBF   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  --------->GLK1(2)     --------->ZAT6<---------RAP2.6(2)         <------ZmHOX2a(1) --------->MYB46(3) <---------GLK1(2) <----------DOF2xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->TOE1(2)   --------->ALFIN1 ---DOF2        ------>ZmHOX2a(1) ---------->DOF2           <------ZmHOX2a(1)       ----------->HVH21   tcagaatcttttcttctccttctttaaccctaaccctaatgccgctgaaaacaatgctgagaggagtaggaacgaaggagaattcaacgacggaggagcc  4927900    <------NtERF2   --------->HSFB2a(2)   ------>NtERF2   --------->LBD16                             --------->DEAR3(1)  --------->LBD16                             --------->ATERF1(1)  <---------ANAC46                           ------>NtERF2 <---------LBD16                        <---------LBD16 ----->NtERF2                           <---------------------WRI1 ------->ANAC46                        ------->GAMYB ----------->HVH21                     <---------MYB52(1) ------->DEAR3(1)                     --------->MYB46(3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ------ATERF1(1)                      ----------->HVH21 --------->ETT(2)                <---------LBD16 ---->DEAR3(1)                   --------->ANAC58    ----------->TGA1           --------->ANAC58 --->ATERF1(1)                ---------->DOF2<---------ATERF1(1)--------->ATERF1(1)   <---------ARR14(2) ---ATERF1(1)            <-----------HVH21<---------ATERF1(1)   <------ZmHOX2a(1)     --------->ARR14(2) --ARR14(2)             <---------bZIP60(1) <---------ARR14(2) <---------ATERF1(1)    --------->GLK1(2) ->ARR14(2)             --------->bZIP60(1) --------->ARR14(2)--------->ALFIN1  --------->ANAC58 >ATERF1(1)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)--------->At4g35610     <-----------HVH21   <----- ------>ATERF1(1)<---------ATHB12--------->ANAC58  <---------At4g35610   --------->At4g35610   ------   tccgccgggaacgaagccaatcgatgctgtcacaaaggcaacgacggagcctccgatgacgacggaggagccatcagcgtcgaagcaaaatccggtcgta  4928000                                           --------->ANAC58                                           --------->ANAC58                                         --------->YAB1                                      <---------ICU4                                      --------->YAB1                                        ---------                               --------->LBD16                                            <---------HSFB2a(1)                               <---------ETT(1)                                           --------->HSFB2a(1)                           <---------ARR14(2)                                         ----------->GT1                     <----------ID1--------->YAB1    <xxxxxxxxxxxxxxxxsmallRNA(s)   <------ZmHOX2a(1)        ------------------------>ANAC81  <---------ICU4      <------ZmHOX2a(1)    <---------TOE2(3) ----YAB1          >>>>>>>>>TBF1------>NtERF2       <---------ZAT6               --------->YAB1 --->ICU4 <------ZmHOX2a(1)--------->ARR14(2)   <---------ZAT14             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   attgagggaagaggagttgaagaagaacaaatcccgaccataatcacgaccgtagtggaagaaggagagaagtctgacaacaatgaggaagaaaattctg  4928100                                                                          <------ZmHOX2a(1)   -------                                                                  ------------------------>ANAC81  <-        ---------->DOF2                        ---------->DOF2 ------------------------>ANAC81<------  <------ZmHOX2a(1)     >>>>>>>>>TBF1  >>>>>>>>>TBF1          ---------->DOF2---------->DOF2  <------ >GLK1(2)           <---------ZAT14<---------ZAT14    >>>>>>>>>TBF1 <------ZmHOX2a(1)  --------->ALFIN1   agaaggatgagaaagaagagagtgaagaagaagagagtgaagaagaagagaaagaagaagaagagaaagaggaagaggagaaagaagaagaggggaatgt  4928200            --------->TOE1(2)           ------>ZmHOX2a(2)          <------ZmHOX2a(2)         <-----------ARR10         <---------ARR14(2)         --------->ARR14(3)         <---------ARR11(3)         --------->ARR11(3)         <---------ARR14(3)         --------->ARR14(2)                                                                         -        <------ZmHOX2a(1)                                                                          <-       ----------->ARR10                                                                           <-     <------ZmHOX2a(1)                                                                            ---     =============HOX2a_HOX2a                                 --------->GLK1(2)          --------->ANAC58  <------NtERF2                                               --------->ARR14(2)         --------->ANAC58 --------->LBD16   --------->YAB1                             <---------ARR14(2)   --------->ALFIN1<- -->HSFB2a(1)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   --------->YAB1       --------->ZAT14    <-- --------LBD16    <---------YAB1                 ------>ZmHOX2a(1)             <---------ZAT14    <-- -----RAV1(1)   <---------At4g35610     ---------->DOF2<XXXXXXXXXXXXXXXXXXXXMIR774B*   ---------->DOF2 ---HSFB2a(1)------>ZmHOX2a(1)  <---------HSFB2a(1) ------>ZmHOX2a(1)          --------->ZAT18    ---   tgccggaggaggatcctccgatgatagtagtagaaccttgggcaaagagtcctcctccgatgagaatatggatgatgagactgcagtgggaaagcaagtg  4928300              --------->YAB1             <---------TOE2(3)          <---------ARR14(2)         <------NtERF2        ------>NtERF2        <---------RAP2.3(1)        <---------ERF1        <---------MYB46(3)       <---------ANAC46       <---------ATERF1(2)       <---------DEAR3(1)       xxxxxxxxxxxxxxxx>smallRNA(i)       --------->ATERF1(2)      --------->ATERF1(1)     --------->LBD16     ------>NtERF2     <---------RAP2.3(1)     <---------ATERF1(1)    <---------RAP2.3(2)    <---------RAP2.6(2)    <---------LBD16   <---------LBD16 --------->GLK1(2) -------->KAN4(2) --------KAN4(1)                                   ----------->GT1 ---------TaMYB80                           ----------->HVH21 ------>ARR14(2)      <---------GLK1(1)   <---------ANAC46                <---------GLK1(1) --------GLK1(1)      --------->GLK1(1)   ----------->GT1    <------ZmHOX2a(1)                      < -------ARR11(3)    <------ZmHOX2a(1)<---------AtLEC2<--------P   --------->ZAT6             -------- -------ARR14(2)   --------->ICU4xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <---------YAB1    <-----------HVH21 ------>ARR11(3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     ----------->GT1   xxxxxxxxxxxxxxxxxxxxxxx   gatattccggcggctatggtaaggatttctcaagtatttgaatggtgtgaaactggtagaacaggataatactatgatttctgtagaaaactgtcattac  4928400  Previous    Next  AGI:  At3g14660.1    Description:  CYP72A13 (cytochrome P450, family 72, subfamily A, polypeptide 13); oxygen binding. similar to CYP72A15 (cytochrome P450, family 72, subfamily A, polypeptide 15), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G14690.1); similar to CYP72A14 (cytochrome P450, family 72, subfamily A, polypeptide 14), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G14680.1); similar to CYP72A11 (cytochrome P450, family 72, subfamily A, polypeptide 11), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G14650.1); similar to CYP72A58 [Nicotiana tabacum] (GB:ABC69422.1); contains InterPro domain Cytochrome P450, E-class, group I; (InterPro:IPR002401); contains InterPr Range:  from: 4924784    to: 4927441    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g14670.1    Description:  unknown protein Range:  from: 4927854    to: 4928875    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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