Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            ------->PIF5                          <-------PIF5                          <-------MYC3                          ------->MYC3                          <-------MYC2                          ------->MYC2                         --------->ANAC46                         <---------O2                         --------->TGA1a                         <---------TGA1a                                                      -------                         --------->ANAC55(2)                                           <---------YAB1                    --------->ANAC46                                                  <---------ARR11(3)                 --------->ZAT14                                                      --------->ARR11(3)             <-----------GT1        --------->YAB1                            <---------AHL20(2)        <----------DOF2  --------->bZIP60(2)                                 --------->AHL20(1)        ===========================bZIP_DOF                                  --------->AHL20(2)     --------->ANAC58    --------->O2                                        <---------AHL20(2)     <     --------->ANAC58  <---------ALFIN1                                      <---------AHL20(1)     < ---->ZmHOX2a(1) <---------ZAT14   <---------YAB1                        <------ZmHOX2a(1) --------->YAB1   cctgcacaagctttgatactatactccacgtgatgttatcaaaacttatacatatgagaaacaaaatttcatagaggaatttattcaagataatagtcat  4919500                                                                         ------>MYB46(1)                                                                         ------>MYB83                                                                       <---------MYB59              -                                 --------->YAB1                     <-----------GT1                 < -->YAB1               <---------ANAC58                          <---------AHL20(2)             ----- -----------GT1        <---------ANAC58                       <---------AHL20(2)         <---------ZAT6 <<<<<<<<GT-1    <---------TOE2(3)    <---------MYB52(2)    <---------YAB1          --------->TOE2(3)   attaaccatgttttgaattgagaatgcttccctaataacaactaatccatctatttttgagtattattttataccaaatagaaatgccttagtggaagag  4919600                                                                                              -------                                                                                            ---------                                                                                           --------->YAB1                                                                                          <---------ATHB12                                   <---------ARR11(3)                                  <-------------                    --------------->AGL15                                              --------------              --------->GLK1(2)    --------->ARR11(3)                                 ---------------          --------->YAB1           --------->GLK1(2)--------->RVE1(1)                 ------------>CBF     --------->AHL20(2)     ----------->GT1        --------->ARR11(3)                 --------->LBD16     <---------AHL20(2)   <---------LBD16  ----------->GT1                            --------------- -------->ARR11(3)  <---------------AGL15---------->DOF2     <----------DOF2    <-----------GT1     < ---------ARR11(3)  ================================================================================= ---->CCA1(2)<---------GLK1(2)    --------->RVE1(1)<---------ARR11(3)        <---------REM1(1)-------   atgatatttaaataagaatctacaaatttggggaaaaaatctataaagtttaaaatctctcaacttttgaaatacacagttgtaactccccaataaaagc  4919700     ------------>CBF -->ANAC58 ->DOF2--------->WOX13(1)         <---------YAB1 --AGL15                          ------------>CBF ->AGL15                 ----------->GT1 -->AGL3                 --------->ANAC58 -->AGL2                 --------->ANAC58           ------------>CBF ------------CBF       ---------->DOF2           --------->AHL20(2) ==MADS_MADS        --------->ANAC58  <---------ATHB12                                             <- -->ANAC58          --------->ANAC58--------->WOX13(1)                                <---------AHL20(2)   aaaattgatcaattagtgactcaagtaaagcaaaatatcaatgagtcaaaataaaacaattttgtccaaaacacaaactatacagtattttaaaacatga  4919800                                                                                  --------->MYB52(1)                                                                                 ----------->HVH21                                                                               --------->ANAC46                                                                               <---------ANAC58                                                                               --------->ANAC55(2)                                                                               <---------ANAC55(2)                                                                               <---------ANAC58                                                                             <<<<<<<<<<AtWER              <---------ARR14(2)                                           <---------ANAC58             <---------CCA1(2)                                             <---------ANAC58        <-----------GT1                                                    <---------ANAC46  ----------->GT1                                                 <---------GLK1(1)  <------MYB46(1)                                                --------->ARR11(3)  <------MYB83--------->ARR14(2)                     ----------->GT1   --------->At4g35610       <--- --------->ALFIN1                              <---------HSFB2a(2)--------->GLK1(1)     --------->GLK1(2) <---------AtMYB61                             --------->HSFB2a(2)--------->CCA1(2)    <---------GLK1(2) --------ANAC46    <---------CCA1(2)          <---------LBD16    <---------ARR11(3) <------------MYB.PH3(1)   ggggtggtaatatccatatccataccttcttcgaaactatctctcttctctgggagagaaaaatggagatatcagttgcatgcgtaacagtttctgtagt  4919900                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                              -------                                                                                             <-------                                                                        <---------ANAC58     <-------                                            <------MYB46(1)             <---------ANAC58     --------                                            ----------->GT1             --------->ANAC55(2)  --------                                            <------MYB83                <---------ANAC55(2)  --------                           <---------ARR11(3)                    ---------->DOF2            <--------                  <------MYB46(1)          <---------AtMYB61 <---------ANAC46           <---------ANAC58                  <------MYB83<----------DOF2                <---------ANAC58         --------->ARR14(3)                 --------->MYB55(2)        --------->MYB59   <---------ANAC58         --------->ARR11(3)                 <---------MYB46(3)    <------MYB83        <---------YAB1             <---------ARR11(3)   <---------MYB46(3)      --------->ARR11(3)   xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <---------ARR14(3) ------REM1(1)  <---------ANAC46       <------MYB46(1)---------->DOF2   <---------ANAC46<---------ANAC58   tgtagttgttgtgtcatggtgggtatggagaactttacagtgggtttggtttaaaccaaagatgcttgaaagttacttgagaagacaaggtcttgccgga  4920000       --------->ANAC46  ------>ZmHOX2a(1) ----->GLK1(1) ------GLK1(1) -----ARR14(2) ---->ARR14(2)                                                                             <---------ALFIN1 -NtERF2                                        <---------LBD16                       --------->GLK1(1) -->LBD16                           --------->TOE2(3)                                 <---------GLK1(1) --ATERF1(2)                       --------->ANAC58                                  <---------ARR11(3) --HSFB2a(2)                       --------->ANAC58                                  --------->ARR11(3) ->HSFB2a(2)                     --------->ARR14(2)     ----------->RAV1(1)     ------->GAMYB ->ETT(1)                        <---------ARR14(2)   <------NtERF2           -------->P <-----------GT1 ->LBD16                        <------ZmHOX2a(1)    --------->ANAC58        --------->MYB52(1) -LBD16<---------ALFIN1       <---------------AtSPL3 --------->ANAC58      <---------MYB52(2)   -----   actccttacacacctcttatcggtgatttgaagaggaacgtcaacatgttgacggaggcaacatccaaacccatcaaactaaccgaagatatcacacctc  4920100                                                 <--------P <---------ANAC58                                              ------>ZmHOX2a(1)                                            <---------ANAC46<---------ANAC58   ------>ZmHOX2a(1)              --------->ANAC58     <----------DOF2 <---------ANAC58                 --------->ANAC46    <---------DAG2 <---------ANAC58                 --------->ANAC58 <------MYB83  ------>ZmHOX2a(1) ---->O2   <<<<<<<<<NAM         --------->MYB52(1) <------MYB46(1)                            -------   gtgtcctgcctcatcccttccaaatgctcaagactcacggtatgtgtcctggttggccttttgcttcctctctgttttaaactgttgatcaagagaaaaa  4920200                                                                        --------->YAB1                                                                        --------->AtMYB61                                                       <---------ANAC58 ------->GAMYB                                                       <---------ANAC58<---------MYB55(2)                                                  <---------AtLEC2     --------->MYB46(3) --------->LBD16                                              <----------DOF2         ------>MYB83      ------>ZmHOX2a(2)                         <---------ANAC46     <---------------AGL15   -------->P--------->ICU4      -                    <-----------RAV1(1)      <-----------------AGL3   ------>MYB46(1) ------->TEIL<--               <---------ARR11(3)         <----------DOF2           --------->AtMYB61 <---------ARR14(2)               --------->ARR11(3)      <------ZmHOX2a(1)           --------->MYB46(3) --------->ARR14(2) --->DOF2     <---------CCA1(2)    <------ZmHOX2a(1)   <---------ANAC46<---------ATHB12<------ZmHOX2a(2)   gagtttcaaattttgtatatctatgtggtttgaaacaggaaggactttctttacatggcttggacccaaaccaaccatcaccataatggatccagagcta  4920300                                                                                 <---------ICU4                                                                                 --------->YAB1                                                                                --------->AHL20(2)                                                                                <---------AHL20(2)                                                                              --------->TOE2(3)                                                                             <---------ICU4                                                                             -------->ATHB1                                                                             --------->YAB1                                                                             <--------HAHB4 <--------                          <---------YAB1                                     --------->ATHB12  <-----       <---------ZAT6   --------->YAB1           <----------DOF2            <---------ATHB12--------- --------->DOF2        <---------YAB1  <------NtERF2                        --------->ICU4----------- -------ATHB12 ---------->DOF2       --------->RAP2.6(2)          <<<<<<<<<<<<<<<<<LFY<---------YAB1   atcaaagaagtgttcaacaaagtttatgattatccgaaggcgcaaacgtttcttttgggcagactaatagccactggaatcattaattacgatggtgata  4920400  Previous    Next  AGI:  At3g14630.1    Description:  CYP72A9 (cytochrome P450, family 72, subfamily A, polypeptide 9); oxygen binding. similar to CYP72A15 (cytochrome P450, family 72, subfamily A, polypeptide 15), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G14690.1); similar to CYP72A13 (cytochrome P450, family 72, subfamily A, polypeptide 13), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G14660.1); similar to CYP72A11 (cytochrome P450, family 72, subfamily A, polypeptide 11), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G14650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16049.1); contains InterPro domain Cytochrome P450, E-class, group I; (InterPro:IPR002401); contai Range:  from: 4917505    to: 4919416    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g14640.1    Description:  CYP72A10 (cytochrome P450, family 72, subfamily A, polypeptide 10); oxygen binding. similar to CYP72A15 (cytochrome P450, family 72, subfamily A, polypeptide 15), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G14690.1); similar to CYP72A13 (cytochrome P450, family 72, subfamily A, polypeptide 13), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G14660.1); similar to CYP72A11 (cytochrome P450, family 72, subfamily A, polypeptide 11), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G14650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16049.1); contains InterPro domain Cytochrome P450, E-class, group I; (InterPro:IPR002401); cont Range:  from: 4919863    to: 4921794    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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