Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  --------->ZAT2                                                                              <-----------RAV1(2)  <------ZmHOX2a(1)                                                           <---------ALFIN1 ->ZmHOX2a(2)                                                          <-------TEIL ---TEIL                                                               ---------->DOF2 -ZmHOX2a(2)          --------->ANAC58                                --------->CCA1(2)      <------- ---ARR14(2)          --------->ANAC58                               --------->ARR14(2)      -------- -->ARR14(2)          --------->ANAC46                               <---------ARR14(2)      -------- -HSFB2a(1)     --------->GLK1(1)                                --------->ZAT14<---------ZAT2 >HSFC1(2)--------->ANAC58                                       <---------At4g35610    <<<<<<<ZML2 -HSFC1(2)--------->ANAC58                                       <---------ZAT14<---------At4g35610-- >HSFB2a(1)     --------->At4g35610                          --------->ARR14(2)--------->ANAC46 -----   cataggagtcacaagcagagctccaagtaatgggtatgtttccatagtatgctaagtaaaccgtctctgcagatacagccccagccgctagaaccacgta  4803400                                                      --------->ANAC46                                                      <---------ANAC55(2)                                                      --------->ANAC58             --------->ANAC58                --------->ATHB12             --------->AtLEC2               <----------DOF2     ----------->RAV1(2)                   <---------ANAC46   <---------ALFIN1                        <---------ANAC58  --------->MYB46(3)                       <---------ANAC58                                      ---- --ANAC55(2) --------->ANAC58   <---------ANAC58      --------->ANAC55(1)         XXXXXXXXXXXXXXXXXXX ->ANAC58   --------->WOX13(1)  <---------ANAC46      --------->ANAC55(2)         XXXXXXXXXXXXXXXXXXX ->ANAC58 --------->WRKY18(1)   <---------ANAC58      --------->ANAC58 <---------ANAC46         ----- --------->HVH21             ----------->HVH21       <---------LBD16   <---------ANAC58       ------- -->TEIL <-----------HVH21   ------>ZmHOX2a(1)     <---------REM1(2)   <---------ANAC58   <---------KAN4(2)   tgtgaccacctggtcaagcaagaacaatgtcctgacttggaccttgcttattggacacggaagcgctaatattgcgagagccgagagaagagaataagca  4803500    --------->ANAC58    ------->GAMYB            ------>MYB46(1)    --------->ANAC46         ------>MYB83                     --------->ATHB12    --------->ANAC58       --------->TOE1(2)---------->DOF2 <---------WOX13(1) ----->At4g35610      ------>MYB46(1)<----------ID1       --------->ATHB12 >MIR156A-F           ------>MYB83   ----------->GT1     <---------YAB1                  ---------->DOF2 >MIR156G       --------->MYB46(3)  ----------->GT1      --------->ICU4       --------->ANAC58 ------>RAV1(1)--------->ANAC58   --------->MYB52(1)----------->GT1           --------->ANAC58 -->At4g35610  --------->ANAC58--------->YAB1      --------->DAG2          <---------ATHB12         -   gcacaaacgccattagcactcaccaaatacctacaataagggaaaaaaaaggaaaggttatgattgattacgctctaatgaagcaagaagagaaagagag  4803600                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                     XXXXXXXXXXXXXXXX                                                                                     --------->bZIP60(1)                                                                                     <---------bZIP60(2)                                                                                     <---------bZIP60(1)                                                                                  ----------->TGA1                                                                                --------->YAB1                                                                                <---------ICU4                                                                               --------->ICU4    ----                                                    <---------ARR14(2)         <---------YAB1--------                     --------->At4g35610            --------->ARR14(2)       <---------ICU4 ---------        ----------->GT1               --------->ANAC58                       --------->YAB1 --------- -------->CCA1(2) ---------->DOF2     --------->ANAC58<-------TEIL   --------->ARR11(3)----------->HVH21   agatagaagaaggtgaacatgaaagctccaatatttgagtaagaaacagagccaaattcgttggagatagagttcttgatcatgatgacgagacccgtaa  4803700                                                                                   <-------GAMYB  ---------->DOF2                  <---------At4g35610                            <---------DEAR3(2) -ANAC55(2)                        ------>NtERF2                                  <---------MYB46(3) >ANAC46                        --------->At4g35610                              <---------RAP2.6(2) >ANAC58                        <---------At4g35610                              <---------DEAR3(1) >ANAC55(1)                 --------->DEAR3(1)                                   <---------ANAC46 >ANAC55(2)              <---------PCF5                                    <<<<<<<<<WRKY18 XXXX>MIR4240            <---------ARR14(2)                                <---------WRKY12 ----->ICU4              <------ZmHOX2a(1)                               <-----------HVH21 ->LBD16                 --------->ARR14(2)           ---------->DOF2    --------->TOE2(3) -->GT1                <---------TOE1(2)         <---------ZAT18 <---------At4g35610 >ANAC58            --------->ANAC46    --------->GLK1(1)     ---------->DOF2  ------------>AtMYB77   tacttagagccattgatgctactcgcaggaccgcctctgccgatttctcagtgcgattaagcactaaagctgattcgtcaatggcggtttgatcagtctt  4803800                                    <----------DOF2                                   ------>ZmHOX2a(2)                                  <------ZmHOX2a(2)                                 <---------ARR11(3)                                 --------->ARR11(3)                                 --------->AGP1              <---------ANAC55(1)                                --------->GLK1(1)            --------->ANAC55(2)                                <---------GLK1(1)  --------->YAB1                        =================HOX2a_HOX2a   <---------TOE2(3)                        <------ZmHOX2a(1)       <----------DOF2                <----------ID1     <--                        ==================HOX2a_HOX2a --------->YAB1---------->DOF2              ----                  *TSS<---------TOE1(3)       ---------->ID1 <---------ANAC46  --------->ANAC46  ----    <----------DOF2   <---------TOE2(3)   <----------DOF2    <---------ANAC55(2)              -------   gtccatcttttttttttggtgtttaaggatagagagatctttgtctttgtcttttataatgttaagtgtttaaagtcataaacgacaaaacagtcgctca  4803900                             --------->TGA2(2)                             ----------->HVH21                            <-----------HVH21                            <-----------TGA1                           <---------ANAC55(2)                           --------->ANAC55(2)                           --------->ANAC46                           --------->TGA2(1)                           <---------TGA2(1)                                                      <--                           <---------bZIP60(2)                                                    <--                           --------->bZIP60(2)                                                    <--                           <---------bZIP60(1)                                                    ---                           --------->bZIP60(1)                                      --------------->AGL15                           <---------ANAC58                                        <-----------------AGL2                           =======================================bZIP_DOF         ----------------->AGL2                           <---------ANAC58                                        <-----------------AGL3                           --------->O2                                            ----------------->AGL3                           <<<<<<<<<<HY5                                           ----------------->AGL1            --------->YAB1 <---------O2                                            <-----------------AGL1            <---------ICU4 --------->TGA1a                                         <-----------------AG         --------->YAB1 ----------->TGA1                                           ----------------->AG        <---------AHL20(2) <---------TGA1a                              <--------HAHB4            <--       --------->AHL20(1) ----------->STF1                              <---------ICU4     <------MYB46(1)       --------->AHL20(2) <-----------STF1                              --------->YAB1     <------MYB83       <---------AHL20(1)<---------TGA2(2)                  <-----------GT1 <---------AHL20(2)   ----  ------------>CBF      ----------->HVH21              <----------DOF2 <---------ATHB12   --------->MYB59 -------ATHB12      --------->AHL20(2)           ----------->HVH21   <-----------GT1<---------------AGL15 ----->ANAC58      <---------YAB1              --------->ANAC55(2) --------->AHL20(2)  --------->ARR14(2) ----->ANAC58 <---------ANAC55(2)              <---------At4g35610 <---------AHL20(2)  <---------ARR14(2) -->WRKY18(1) --------->ANAC55(2)             <---------TOE2(3)   --------->YAB1 <-----------GT1<----   agcattcaatataatcatgtgattatatgacgtcaccagtctcaattttaggtgactctttttctctattttaatcatttttttttccaaatttggtatt  4804000          ---------->DOF2   --------->HSFB2a(2)   <---------HSFB2a(2)                        <---------TOE2(3) ------->TEIL                              --------->CCA1(2) --------->MYB52(1)                       >>>>>>>>>>GT-1 -------ANAC58                            --------->ARR11(3) -------ANAC58                           --------->YAB1 -------ANAC55(1)                    --------->AHL20(2)                    <---------LBD16 ------>ANAC55(2)                    <---------AHL20(2)                    <---------ANAC46 -------ANAC55(2)       --------->MYB59<---------TOE2(3)                  <---------LBD16 ----------->AtSPL3<---------YAB1   <---------YAB1                  <---------YAB1 -------GT1      ----------->GT1    --------->ICU4                --------->YAB1   acgtaccagaagtaaagagatgtgattaggccttcgtaattaatgatataggttgtctgtttattcatttatgattttcgggtatggactattttctctc  4804100                                                           <------ZmHOX2a(1)                                                <-------MYC3                                                ------->MYC2       --------->ZAT14                                                <-------MYC2       --------->At4g35610                                       <---------DAG2--------->MYB59    --------->ANAC58            <                  <XXXXXXXXXXXXXXXXXXXXMIR824   ------->MYC3       <---------ZAT14                 <-               <-------TEIL            <----------DOF2 <------ZmHOX2a(1)--------->ANAC58         ----        <---------TOE2(3)--------->ATHB12       <-------MYC4       --------->ZAT18               <---   aatccttgttaagaaaattcattcacatgaatggtctaatactttttgcacatgttaggaaggaccgtctgcacaagcagagactcccatccatgttgac  4804200     --------->TOE2(2)                                                                            ---     <---------MYB59                                                                     --------->AHL20(2)     --------->TOE2(3)                      <----------DOF2                          <---------AHL20(2) ----------DOF2                       --------->ZAT6--------->YAB1               <---------AHL20(2) --------ICU4                 ------->TEIL  <---------DAG2                       --------->AHL20(2) ----->ARR11(3)           <---------------AtSPL3 --------->YAB1        <------ZmHOX2a(1) <---------AHL20(2) ------ARR11(3)           --------------->AtSPL8<---------YAB1    <------ZmHOX2a(1)  --------->AHL20(2)   atctttacctaagttatttcaagaacattatgtacgcttaagtctactttataatagtaaatgacataggataggacgaccatataaatatttatttttt  4804300  Previous    Next  AGI:  At3g14380.1    Description:  integral membrane family protein. Identical to UPF0497 membrane protein At3g14380 [Arabidopsis Thaliana] (GB:Q9LUL1); similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT1G17200.1); similar to hypothetical protein [Gossypium hirsutum] (GB:CAC84114.1); contains InterPro domain Conserved hypothetical protein CHP01569, trans-membrane plant (InterPro:IPR006459); contains InterPro domain Protein of unknown function DUF588 (InterPro:IPR006702) Range:  from: 4802959    to: 4803818    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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